Phyg026251.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- retn
- Assembly
- GCA_029228625.1
- Location
- CM055404.1:110336265-110346201[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-15 2.9e-11 45.2 0.0 28 89 3 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCTAAACAAGTGTTGGACTTGTACAAACTTTATACGCTTGTCATTGCCCGTGGAGGATTGGTCGAGGTTATTATCAAGAAATTGTGGCAAGAAATCATCAAGGGTCTCAACTTACCATCAAGTATAACAAGTGCAGCCTTCACTTTACGTACACAATACGTGAGATTCATATTTGATTATGAAATGGAGGTGCACAACCTCAGTACAAAAGCGGAACTTGATGCAGCTATTGATGGCAATAAACGCGAAAGCAGAAAGAACCACAATTCTATGAATGAATCACCGCGACTACTCCATAATGGGCACGAAATGCTTAATGGTCACGCACATAATGGTCACCAAATGAATCCTGCCTACACCCTTAGCAATTATCCAATCACAGCATTGTTAAATACAAGCTTCCAATCTCAATTAAGACATCAGATCACACAAGATTACCGTCCTGCTATTGACCCAAGTGTACTCGCAGCATATATAAGCCGCTTACATAATCCAGAGTCAATGTACTCAAATGAAGCTTTGGCAGCATATGTTAAGAATAATATACTTAACATGCAAGTCAACGCCGACGCCATTGCCGCCGCCTTTGTCGCAAGCACTCAACAGCCATCGGAACCACAAAGTGAAGCGCTTAATTTGGCTGATGCTGCGCGCGATGCTGCGCTCGATGACACACGCGGTGCTGCGTGCGATGCTACGCACGATGCTGCGCTCGAGGCTGAGCGCGATGCTGCGCTCGAGGCTGAGCGCGAGGCTGAACGCGAGGCTGAGCGCGAGGCTGAGCGCGAGGCCGAGCGCAAGGCTGAGCGCGAGGCTGCGCTCGAGGCTGCTATGAGAAAACGTTTTGATGAAATATTGGGTTTCAAAAAACCCTCTACTAGTGATGTAAAACGTGCAAATGGACAGCGTAATTTGACACGACCAAACAGCCGAGCATCGTCAGTGCAAGACGTTGATATGGAAGCATCTGAGCCTAAACGCCCACGTACAACCGCGTCCCACACAGTAGTTCTTCCGGCTCCAACAGCAGCACCACGACTCCGTATCATTTTTGAAGATGTTCCAGAAGGGGTACGAGCTGCTCCTCATCTAAATTTGGAAATTAAATATAATGGACTTCAATTCCGTCGTGCCGTTGCGCGTCCAAAACGCTTAACACCAAAAACTCCTAAAAGCCCTAAGAGCCCTAAATCTCCGAATGCAGGTGAAGGAAGCCGTTCATAG
- Protein Sequence
- MAKQVLDLYKLYTLVIARGGLVEVIIKKLWQEIIKGLNLPSSITSAAFTLRTQYVRFIFDYEMEVHNLSTKAELDAAIDGNKRESRKNHNSMNESPRLLHNGHEMLNGHAHNGHQMNPAYTLSNYPITALLNTSFQSQLRHQITQDYRPAIDPSVLAAYISRLHNPESMYSNEALAAYVKNNILNMQVNADAIAAAFVASTQQPSEPQSEALNLADAARDAALDDTRGAACDATHDAALEAERDAALEAEREAEREAEREAEREAERKAEREAALEAAMRKRFDEILGFKKPSTSDVKRANGQRNLTRPNSRASSVQDVDMEASEPKRPRTTASHTVVLPAPTAAPRLRIIFEDVPEGVRAAPHLNLEIKYNGLQFRRAVARPKRLTPKTPKSPKSPKSPNAGEGSRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -