Ppra043651.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- nfxl1
- Assembly
- GCA_951640165.1
- Location
- OX621254.1:2392137-2394608[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2 7.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 22 0.01 3.9e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 22 2.7e-07 0.01 17.8 16.1 3 19 186 202 185 202 0.95 4 22 1.6 5.8e+04 -3.8 0.6 6 10 227 231 226 231 0.78 5 22 1.3e-07 0.0047 18.9 12.9 3 19 239 255 237 255 0.92 6 22 0.22 8.2e+03 -1.0 1.6 5 10 279 284 279 284 0.94 7 22 1.1e-09 4e-05 25.5 11.8 1 19 290 308 290 308 0.99 8 22 0.54 2e+04 -2.3 0.3 5 10 332 337 332 342 0.89 9 22 4.3e-06 0.16 14.0 19.0 3 19 345 361 337 361 0.86 10 22 2 7.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88 11 22 6.6e-06 0.25 13.4 17.0 1 18 395 412 395 413 0.97 12 22 8e-09 0.0003 22.7 16.9 1 19 422 440 422 440 0.99 13 22 0.0002 7.6 8.6 6.4 9 19 488 498 486 498 0.89 14 22 0.012 4.5e+02 3.0 6.6 3 11 509 517 508 518 0.86 15 22 0.35 1.3e+04 -1.7 3.6 14 18 547 551 547 552 0.87 16 22 0.45 1.7e+04 -2.1 0.3 8 12 568 572 568 572 0.78 17 22 5.3e-06 0.2 13.7 4.8 1 11 588 598 588 599 0.97 18 22 2 7.5e+04 -7.2 4.4 6 10 616 620 613 620 0.65 19 22 0.0012 46 6.1 13.0 4 18 630 645 628 646 0.83 20 22 2 7.5e+04 -5.0 2.1 6 10 677 681 676 681 0.81 21 22 0.0001 3.8 9.6 13.6 1 16 687 701 687 706 0.90 22 22 1.7 6.3e+04 -3.9 0.3 12 15 721 724 721 725 0.73
Sequence Information
- Coding Sequence
- ATGGCGCGTAGATACAGAGACGCCGCTGCGAAGCTCCAGCAAAATGTCCAGAAACATCTCAAGGAAATGAAAGACTTATCGTCTTCCGAAGATGAGGAGGCTTACGAGAGCAGCGTGCTAGATGGGGTATTTCAGAGCTACTGGAGAGGCGGCGGAGATACTCATATGCTCAATAGAACCAAGAACCTTTTAGAAGAAGCTATTAGCGGTCGCTCCATCACCTGCCTCATCTGCATAGGCTCGATCAAGAGAAATCACCCTATATGGACCTGTGACCACTGTCATTCATACTTCCACTTATCGTGTATTCAGAAATGGGCAAATGACAGCATCAGCCTACGTAGCGAGCAGCCGCAGGCTCTCATTAGCGTTGTAAAACTCCAGAAAATCGAATGGTGCTGTCCGAAATGTAGGCAGGCGTATTCTAAAGAGGAAATACCACGGAAGTACCGTTGCTTTTGTGGTAAGACTGATGACCCTCCTTATCATCCATGGCTGATACCACATACTTGTGGAGAGGTCTGTGGAAAAAGACTATCTACAGGTAATAATTGTCAACACAAGTGCTTGCTCCTATGCCACCCTGGCCCTTGTCCACCATGCCCTCAAACAGTCAATGGTATATGCTACTGTGAAAAGGAACGAAAAAGAGTCAGATGCAGCGCTGCTAAGTGGTCATGTGGTCAAGTTTGTAAGAAAACTCTTTTATGTAAAACTCATAAGTGTGAAAACAAATGTCATGAAGGTGACTGTGCTCCTTGCAGCTACACCAGTATCCAGTCTTGTGAATGTGGCGCTGAGAAAGCTAAGAGACCCTGCAATGACCCATTCTGGAGATGCCAGAAAGTATGTAATAAACTGTTTTCTTGTGGTTACCATAAATGTGACATGATCTGTCACTCTGGAGACTGTGGCCCCTGCCCTAACTCTGGCATGACTTCTTGCCCATGTGGAGCTAACCAGCGTTATGTCCAATGTCCTGATGTAATGGAAACCTGCTCAGATACTTGTGGTAAGAAACATGAAAGTTGTGAGCACAACTGCCCTGAAAAATGCCACAAGGGGCAGTGCCCCCCCTGTCAAGTTCTTATTCTAAAGAAATGCCAATGTAAAAGCCACAGTAGATCTTTACCTTGCAGCAAGGAGTTCAAGTGTGAGACAAAGTGTAGAGGTACCAGACCATGTGGCAAGCATAGCTGTGCAAGAAAATGTTGTGGTGGAATCTGCCCTCCTTGTGAAAAAACATGTGACAAACCACTCCAATGTGGACGACataaatgtacaaatatttgCCATCATGGCCCTTGCTATCCATGTCCATTAGAATCAAAGGTCACATGCCGATGCAAAGAAACATATATCACTGTACCCTGTGGAAGAGAGAGGCACACTAAGCCTCCAAAATGCAGTTTGCCAtgcaaaattaaatacaaatgtgGCCATGTTGAAGAAAACAAGCACTCTTGCCATTTTGGTGACTGCCCTCCTTGCAAAGCTATCTGTGACAAACCATACTCTAAGTGTACTCACCAATGTAAAGCAGTATGCCATGCAAATGTTGCTGTTGTATTTAAACAAATTGAGAAACCTGCTACTCCATGGGAAGTACAACCTCCAAAGACCAAAATAATGACCTTGGATTGCCCACCATGTGACACTCCAATACCAATTGTTTGCTTTGGTGAACATGAAACTGATTACCAACCATGCCATTCTGCTACTCGTAGACCTTGTGGCAGAGACTGTGGCCGTCCATTAGCTTGTGGTAATCACAAATGTTCATTACTCTGCCATCTTTACAGTCCACTTCCTGAATACCCAAATGTGCCGTCCAGCTGTAAGCAGTGTCAACGAGAATGTGCAGTACCTCGTCCAGCAAAATGTGCTCATAAGTGTGCTATTCGGGGATGTCACCCAGGACTTTGTCCACCCTGTGAGATATTAGAACGACTTGCCTGTCATTGTGGCTTGACGGAAATATACTTGCGTTGTCGTGAAATATCTTCAGCTACTGAAGAAAGGCTGTCATGCCAGCAGCAGTGTCCAAAGAACTTGGAGTGTGGGCACCGCTGTCGCAATACTTGTCATTCTGGTGGTTGTGGCACCCAAATATGTACAAAGAAGACAAAAGTTCACTGTCCTTGTGGAAATATAAAGAAAGATGGGCCATGCAACTCTGTGCGCAATGGTGATATCAAAGTGTTGTGTGATGAAACCTGTGAGGCTAAGAAAATAGCTGCTAAAATAGTGAGTGAGAAAGAAAAGCAGAGATTGAAAGAATTGGAAGAAGAAAGGAATCGAAAAGAGTTAGCTGAGTATGAATGGAAATTAAGTGGTAAAAAGAAGAAATATAAGGAAAAGAAAGTGGTTATGGACAAGGATGACAGAAATTTGCTGCAAAAGTACTGGATTCCTATATTATCAGTGATAGTTCTTATAATAGCtgcaatttattatgtatattacatTTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEAYESSVLDGVFQSYWRGGGDTHMLNRTKNLLEEAISGRSITCLICIGSIKRNHPIWTCDHCHSYFHLSCIQKWANDSISLRSEQPQALISVVKLQKIEWCCPKCRQAYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKRLSTGNNCQHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQVCKKTLLCKTHKCENKCHEGDCAPCSYTSIQSCECGAEKAKRPCNDPFWRCQKVCNKLFSCGYHKCDMICHSGDCGPCPNSGMTSCPCGANQRYVQCPDVMETCSDTCGKKHESCEHNCPEKCHKGQCPPCQVLILKKCQCKSHSRSLPCSKEFKCETKCRGTRPCGKHSCARKCCGGICPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTKPPKCSLPCKIKYKCGHVEENKHSCHFGDCPPCKAICDKPYSKCTHQCKAVCHANVAVVFKQIEKPATPWEVQPPKTKIMTLDCPPCDTPIPIVCFGEHETDYQPCHSATRRPCGRDCGRPLACGNHKCSLLCHLYSPLPEYPNVPSSCKQCQRECAVPRPAKCAHKCAIRGCHPGLCPPCEILERLACHCGLTEIYLRCREISSATEERLSCQQQCPKNLECGHRCRNTCHSGGCGTQICTKKTKVHCPCGNIKKDGPCNSVRNGDIKVLCDETCEAKKIAAKIVSEKEKQRLKELEEERNRKELAEYEWKLSGKKKKYKEKKVVMDKDDRNLLQKYWIPILSVIVLIIAAIYYVYYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -