Basic Information

Insect: Pseudoips prasinana
Gene Symbol: zfh1
Assembly: GCA_951640165.1
Location: OX621242.1:39171083-39181029[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.035 5.7 9.6 0.3 1 23 50 72 50 72 0.94

2 8 5.3e-06 0.00085 21.6 3.0 1 23 83 105 83 105 0.98

3 8 2.3e-06 0.00037 22.7 6.2 1 23 114 136 114 136 0.99

4 8 0.00016 0.026 16.9 1.0 1 21 142 162 142 163 0.95

5 8 0.00072 0.12 14.9 0.8 1 21 422 442 422 443 0.93

6 8 1.2e-05 0.002 20.5 1.1 1 23 744 766 744 766 0.94

7 8 7.6e-05 0.012 17.9 7.2 1 23 772 794 772 794 0.98

8 8 0.065 11 8.7 8.1 1 21 800 820 800 821 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.035	5.7	9.6	0.3	1	23	50	72	50	72	0.94
2	8	5.3e-06	0.00085	21.6	3.0	1	23	83	105	83	105	0.98
3	8	2.3e-06	0.00037	22.7	6.2	1	23	114	136	114	136	0.99
4	8	0.00016	0.026	16.9	1.0	1	21	142	162	142	163	0.95
5	8	0.00072	0.12	14.9	0.8	1	21	422	442	422	443	0.93
6	8	1.2e-05	0.002	20.5	1.1	1	23	744	766	744	766	0.94
7	8	7.6e-05	0.012	17.9	7.2	1	23	772	794	772	794	0.98
8	8	0.065	11	8.7	8.1	1	21	800	820	800	821	0.96

Sequence Information

Coding Sequence: ATGTTTACACGATCTGTTGGCGACGTGTTTGTGGGCGGTGAAGTCACGATACGACCTGTTCGTCCGCTGGCCGGCGGAGGGTCGGAAGGCAAGCCATCCGAAGAGGAGGAGGAGCGGGGTGGGTCCCCGCTGGGCCCCGGAGGGCCCTTCTCCTGCTCACAGTGCCGCGGTGCCTACCCCTCGCGAGAGCAACTAGAGCGCCACGAGACCCTGCACGCGCCCAACACACAGGTGGATACCGTCAAATATACATGCAAAATCTGCCACAAAAGCTTTGCGAATGTCTACAGACTCCAGCGGCACATGATCAGCCACGATGAGAGCGCTACACTCCGGAAGTTTAAATGCAATGACTGCGATAAAGCGTTTAAATTTAAACACCACCTCAAGGAGCACCTGCGAATACACAGCGGGGAAAAGCCCTTCGAATGTGCCAACTGCGGCAAGAAGTTCTCTCACTCAGGCTCCTACTCCAGCCACATGACCTCTAAGAAGTGTCTGGTCATGAACCTCAAAATGGGACGTATCAAACCCACTAATCCCGCGCTCAATCCGGATAGAAGTCCGTCACGCAAACGAGCTAATGCCATGGTCACCtcacatttaaataataacatcgCAGCGAATGGCAACTCTTTCCTCCCCATTCTACCTAAGTATTCAGATTTCTTCGCATCAATGGCGTCGCAAGAAAACTTTCATCGTCCATCTCTAGCACAACCAGGCATGAATCCGTTTTACATGCCTCCAGGAATGCCTTTGAGTCCAGCAAGTGGAATAGCTCCCTATAGCATTCCCGCATCGCTTAGCCAATTTTTAGAGCAGCTAGCTTCATCGCAATATCAACAACGAAAAATTGAGAGTTCCGCAAGTCCGAAGCAAACTAGTCCTACTCCTGCCAATCCTGAAGATTTAATCGAAGAAGTCACCGAAGAAGATGACAAGCGGTCCGAAGGAAGTGCTGAGCTCGTGATGGACATCGAGGATGACGAAGCGGTGTCTATAAAGAAGGAGCAAGAAGAACGTGAGAATGACGTGAGGTCGCCTTCTCACAACTTTTCCGtccctttaaataataatggtcATGGAACCGAAAATCACTCTGGTTACGGTTCTTTATTTGAATCAGTTAGTGCGTCTGTGACAAAACACTTCTTAAGAGCAAACATGGAAACACTGTCGCCTGTTTCCGGCAACATCTGCCCCAGTGTAGCATCGCCACCCGCTCGGCACGTCATCGTTAAGGAAGAGCCAGAAGACTTGCATAGATGTTTAAAATGCAATGCCACTTTCAGCAACAAAAGTGATTTATTAGATCATGAAAAAATGCTAAGATGTGGAACTATGTTTAGAAAGCACGAAGGTTTGGCAGCGCAGGTAGCTGAAACGGTAGCTCTCAATAGACTAGAAGCGGAAATGCGCGTTTCTATTCAAAGCGGTGTAAGTGCGAGTGAAGACGAAGACTTTAATAGAGATGAACGTGATGATAAAATGTCCATACACGACAATGATAGAAAAATTAGGGTGCGTACTGCGCTTAATGAGGAACAGCAAACGATTCTAAAAGAACACTATTTGATCAATTCACGGCCAAACCGCGAAGAGTTTAAACGAATAGCTCAACAAATTGGGCTCGACAACAGAGTAGTGCAAGTCTGGTTCCAGAACAACCGAGCCAGGGAACGGAAAATGACGCAAACCGTCGCTGCACCCGACCAGCCGCTTGACTTGTCGACTAAGAAGTCGAACCCGTCAGTGACGTCAAGTCCGTCTCCCTCCCCGTGCAGTATTTCTGTAACACATTCCGACTCCGAAGAAGCAGTTAACTTGAGCCAGAAATCTTCGCGTAGTACGACGCCACAGCGCAACAATTATCTGAATACTTATCCACATTCCAATTGTTCTTCATCTTCTTTTACCGACTTTCGATTGTCTCCCTCTCCAGGTGAGAATATGAATGGTCAAAAGCGGTTACTACCACAAAAACTACACGTTAATCCCTTGGTTCCCATGGACAAGATATACCAATACAATGATATGGCAAACGCTCGATCTCCGATTCTCAATAGGCATCTACACGCCGATATTAATCGACAAGGATTAAGTCCATCTTACGAGCGGGCACCTTGGAGCGAGGATATGATGCAGGGGCAGAATGATATGGAAGACGAAGGGATAGTACTTAAGAAGAGCAAACTGAAGCAGGAGTTCAAGGAAGGTGAAGGACAGTTTGTTTGCGACCAATGCGACAAAACATTCGTGAAGCAGAGCTCTCTTGCCAgacataaatatgaacattcAGGTCAGCGTCCGTACAAGTGCGTGGAGTGCCCAAAGGCTTTCAAGCACAAACATCACCTGACCGAGCACAAGCGGCTGCACACCGGCGAGAAACCGTTCCAGTGCTGCAAGTGCTTTAAGAAGTTTTCGCACTCCGGCTCCTACAGCCAACACATGAACCACAGGTTCGCCATCTGCAAGCCCTACAGAGACTAA
Protein Sequence: MFTRSVGDVFVGGEVTIRPVRPLAGGGSEGKPSEEEEERGGSPLGPGGPFSCSQCRGAYPSREQLERHETLHAPNTQVDTVKYTCKICHKSFANVYRLQRHMISHDESATLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPTNPALNPDRSPSRKRANAMVTSHLNNNIAANGNSFLPILPKYSDFFASMASQENFHRPSLAQPGMNPFYMPPGMPLSPASGIAPYSIPASLSQFLEQLASSQYQQRKIESSASPKQTSPTPANPEDLIEEVTEEDDKRSEGSAELVMDIEDDEAVSIKKEQEERENDVRSPSHNFSVPLNNNGHGTENHSGYGSLFESVSASVTKHFLRANMETLSPVSGNICPSVASPPARHVIVKEEPEDLHRCLKCNATFSNKSDLLDHEKMLRCGTMFRKHEGLAAQVAETVALNRLEAEMRVSIQSGVSASEDEDFNRDERDDKMSIHDNDRKIRVRTALNEEQQTILKEHYLINSRPNREEFKRIAQQIGLDNRVVQVWFQNNRARERKMTQTVAAPDQPLDLSTKKSNPSVTSSPSPSPCSISVTHSDSEEAVNLSQKSSRSTTPQRNNYLNTYPHSNCSSSSFTDFRLSPSPGENMNGQKRLLPQKLHVNPLVPMDKIYQYNDMANARSPILNRHLHADINRQGLSPSYERAPWSEDMMQGQNDMEDEGIVLKKSKLKQEFKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHTGEKPFQCCKCFKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281695;
90% Identity: iTF_01076880;
80% Identity: iTF_01264284;