Basic Information

Insect: Pseudoips prasinana
Gene Symbol: TIGD4
Assembly: GCA_951640165.1
Location: OX621264.1:13901962-13909882[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.028 4.5 9.9 0.5 1 23 43 66 43 66 0.94

2 16 2.2 3.6e+02 3.9 0.0 2 23 95 117 94 117 0.92

3 16 0.23 37 7.0 2.1 2 23 140 161 139 161 0.96

4 16 0.00014 0.023 17.1 1.2 1 23 165 187 165 187 0.98

5 16 0.059 9.6 8.8 0.5 1 14 192 205 192 212 0.82

6 16 0.074 12 8.5 2.9 2 23 223 245 223 245 0.93

7 16 0.0068 1.1 11.8 3.9 1 23 414 437 414 437 0.95

8 16 0.28 46 6.7 0.2 2 23 464 486 463 486 0.93

9 16 0.3 48 6.6 1.8 2 23 509 530 508 530 0.96

10 16 0.1 17 8.1 0.2 1 23 534 556 534 556 0.93

11 16 0.0013 0.22 14.0 0.3 1 23 561 584 561 584 0.98

12 16 0.055 8.8 9.0 0.1 2 23 592 614 591 614 0.88

13 16 0.00037 0.059 15.8 0.8 2 23 622 644 622 644 0.96

14 16 0.0019 0.3 13.6 3.1 1 23 650 672 650 672 0.98

15 16 4.7e-06 0.00076 21.8 1.2 1 23 678 700 678 700 0.99

16 16 7.9e-05 0.013 17.9 5.4 1 23 706 729 706 729 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.028	4.5	9.9	0.5	1	23	43	66	43	66	0.94
2	16	2.2	3.6e+02	3.9	0.0	2	23	95	117	94	117	0.92
3	16	0.23	37	7.0	2.1	2	23	140	161	139	161	0.96
4	16	0.00014	0.023	17.1	1.2	1	23	165	187	165	187	0.98
5	16	0.059	9.6	8.8	0.5	1	14	192	205	192	212	0.82
6	16	0.074	12	8.5	2.9	2	23	223	245	223	245	0.93
7	16	0.0068	1.1	11.8	3.9	1	23	414	437	414	437	0.95
8	16	0.28	46	6.7	0.2	2	23	464	486	463	486	0.93
9	16	0.3	48	6.6	1.8	2	23	509	530	508	530	0.96
10	16	0.1	17	8.1	0.2	1	23	534	556	534	556	0.93
11	16	0.0013	0.22	14.0	0.3	1	23	561	584	561	584	0.98
12	16	0.055	8.8	9.0	0.1	2	23	592	614	591	614	0.88
13	16	0.00037	0.059	15.8	0.8	2	23	622	644	622	644	0.96
14	16	0.0019	0.3	13.6	3.1	1	23	650	672	650	672	0.98
15	16	4.7e-06	0.00076	21.8	1.2	1	23	678	700	678	700	0.99
16	16	7.9e-05	0.013	17.9	5.4	1	23	706	729	706	729	0.98

Sequence Information

Coding Sequence: ATGATTGATACAAATCAACCAAAGAAACATCCGATTATCGGCGTATTAAGCCAACACCGAAATAATTTGGAGGAAGTATTGAAAACGACAAATGCCACGCCAATATTTCGACGTGGCGGAATAGGTTATATGTGCAGCTATTGTATGAAACAATTCCCAGAGGCTAAAGATTTAAAAGAACATACCTTGGAAAGACATACCGGTCGTCTGAATCCGAGTATCGGGTTTACCAAACGTGAGAAACTTGGTGTGTACTGCGTAAGATTAGATATCACCGATTTAATTTGTAAACTATGCGACTCTGCCATCGACAGCATAGATGAATTATTTGCTCATTTACAAGAGAAACACAATAGAAGAATACATACTGATATTCCTAATCATATAATACCCTTCAAATTTCACACAGAAGAATTGACTTGCTGCGTATGTGGAATCACAGTTGAAAAATTCAAAACGTTACTAGAACACATGCATATacattttagaaattatatctGCAGCGTTTGCGAAGCAGGATTCGTCAACAAAAGTTGCCTGGATCGGCATACACGGACGCATCTTAAAGGGACGTTCCCATGTCAATATTGTCCTAAAGTATTCGATACTCGTGTCAAGAAGGGTTCGCATGAAAGATGTAGTCATACGAGCACAAACGCGTTAAATAGATGTGGCTATTGCCATAAAGGATTCAGAGACCATTATATGAAAGAAGAACACTTAGTCAAAGTGCATGGACTTAAACCTGAAGTCTACAATTGCAAAGCTTGCCGTAGGAAACGCAAAGCGCTAACATATGAAGAGAAGTTAAGCATTATAAACAGGCGTAATAATGGTGAAACAACCATGTCGTTGGCAAAAGAACTCGGTCTCAATCATTCAACAATATCAATGGTATTCAAAAATAGGAATAGAATCATGGAAGCGTACAATTCGAACACATCCCAAGTGGCACAGCGGATGAAATTCAGAAAGTCCAATTACAAAAGTGTTGAAGAGCCTTTACTTAAATGGTATACGCAGTTGAAGAATCAAGGTGGACCGAAAATCAAAAGAGAAATTGAGGAAGAAGTAGTAAAGAAAAACGAATTCAATGAAGAAATATTTCACATAGATTCCACAGAAGCGGATAAGCCTAAAATTACTCCAAGAACTGAGCTTGTGAAACATCGTAGTAATATAAAAGAGATACTCCTCAACACTAATGCGACACCAATAAGGAGGTATGGAGGCATTGGCTATACTTGCTGCTTCTGTGATCATCAGTTCACGGAACCTGCAGAACTGAAGAAACATACACAGGCAAACCATAAAAACGTTACTGAGGCTAATTTTATGAAACAAATGAATATGTCTGAGTACGTCGTGAAGTTAGATATAACCGAATTAGAATGCAAACTTTGtgctacaaaaataaacacCCTAGAAAACTTATTAACACATCTGAAAGATGTTCatgataagaaaatatttacagaTGTGAAGAATCATATATTCCCTTTTAGATTTAACGGCGATATACTAAGATGTGTGACGTGTTCGAATCCATTCGACAAGTTTCGTATGTTAGTAAAGCATATGCATATCCACTATCGGAATTTCATTTGTACTGTCTGCGACTCTGGTTTTGTTAATAGGAATGCTTACGCTCAGCATTCAGAAAACCACAGGACTGGTGCCTATGTTTGCGATTACTGTCCGAAGATTTATGCTACGCAAGTAAAGAAGAGACTTCACGAAAGAACTGCCCATACCCATACAGACACTATGAATAAATGTGCCTACTGCCCTGAGACTTTCAAAGATTATAGAAAAAGAGAAGCGCATGTTGCTGCCGCACATGGAGTCAAATCTTTAACACCCAAATGTCAGGCTTGTGATAAAGTATTTAGTAGCAGAAAGTTACTTAGCATTCACGTTAAAAGAGATCATTTAATGGAACGCCCTCATAAATGTACTGAGTGTGAAATGAAGTTTTTCTCCACGACTGGACTGAAGAATCATATGGTAACACATACGGGTTTAAGAGAATTCCAATGCACTGTATGCTTAAAGGCGTTTGGAAGGAAAAAGACATTGAATTCTCATATGCGAATTCATGAAGAAGAGAAGAGATATAAGTGTGAACATTGTGGTCAAACATTTGTTCAAAAGTGCAGCTGGAAAGGCCACATGCGGTCTAAACATGGCGAAATTGTATAG
Protein Sequence: MIDTNQPKKHPIIGVLSQHRNNLEEVLKTTNATPIFRRGGIGYMCSYCMKQFPEAKDLKEHTLERHTGRLNPSIGFTKREKLGVYCVRLDITDLICKLCDSAIDSIDELFAHLQEKHNRRIHTDIPNHIIPFKFHTEELTCCVCGITVEKFKTLLEHMHIHFRNYICSVCEAGFVNKSCLDRHTRTHLKGTFPCQYCPKVFDTRVKKGSHERCSHTSTNALNRCGYCHKGFRDHYMKEEHLVKVHGLKPEVYNCKACRRKRKALTYEEKLSIINRRNNGETTMSLAKELGLNHSTISMVFKNRNRIMEAYNSNTSQVAQRMKFRKSNYKSVEEPLLKWYTQLKNQGGPKIKREIEEEVVKKNEFNEEIFHIDSTEADKPKITPRTELVKHRSNIKEILLNTNATPIRRYGGIGYTCCFCDHQFTEPAELKKHTQANHKNVTEANFMKQMNMSEYVVKLDITELECKLCATKINTLENLLTHLKDVHDKKIFTDVKNHIFPFRFNGDILRCVTCSNPFDKFRMLVKHMHIHYRNFICTVCDSGFVNRNAYAQHSENHRTGAYVCDYCPKIYATQVKKRLHERTAHTHTDTMNKCAYCPETFKDYRKREAHVAAAHGVKSLTPKCQACDKVFSSRKLLSIHVKRDHLMERPHKCTECEMKFFSTTGLKNHMVTHTGLREFQCTVCLKAFGRKKTLNSHMRIHEEEKRYKCEHCGQTFVQKCSWKGHMRSKHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -