Ppra017692.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudoips prasinana
Gene Symbol
hang
Assembly
GCA_951640165.1
Location
OX621241.1:27726428-27736387[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.008 1.3 11.6 1.1 3 23 692 713 691 713 0.96
2 22 0.49 79 6.0 0.3 1 22 1093 1114 1093 1114 0.95
3 22 0.003 0.49 12.9 2.1 3 22 1190 1209 1190 1209 0.96
4 22 0.83 1.3e+02 5.2 0.3 3 23 1218 1239 1216 1239 0.90
5 22 0.014 2.3 10.8 0.2 3 23 1260 1281 1258 1281 0.96
6 22 0.053 8.6 9.0 3.8 1 23 1287 1310 1287 1310 0.95
7 22 0.18 29 7.3 0.0 1 23 1336 1359 1336 1359 0.90
8 22 0.0079 1.3 11.6 3.5 1 23 1364 1386 1364 1386 0.97
9 22 0.012 1.9 11.0 0.1 1 23 1392 1415 1392 1415 0.95
10 22 0.0058 0.93 12.0 0.8 1 23 1428 1450 1428 1450 0.97
11 22 0.00025 0.041 16.3 1.8 1 23 1500 1523 1500 1523 0.97
12 22 0.019 3.1 10.4 0.9 1 23 1583 1606 1583 1606 0.96
13 22 0.0037 0.6 12.6 2.2 2 23 1630 1652 1629 1652 0.95
14 22 0.12 20 7.8 0.1 2 23 1658 1680 1657 1680 0.93
15 22 0.014 2.2 10.8 0.2 1 21 1722 1742 1722 1743 0.95
16 22 0.0006 0.097 15.1 1.0 1 23 1753 1775 1753 1775 0.93
17 22 0.00016 0.026 16.9 0.3 2 23 1869 1891 1869 1891 0.93
18 22 5.7e-07 9.2e-05 24.6 1.4 3 23 1898 1918 1897 1918 0.98
19 22 0.2 33 7.2 0.1 1 23 1937 1960 1937 1960 0.94
20 22 0.26 43 6.8 0.0 1 23 1983 2005 1983 2005 0.97
21 22 0.039 6.4 9.4 0.6 1 23 2011 2034 2011 2034 0.95
22 22 0.00037 0.059 15.8 0.4 1 23 2042 2065 2042 2065 0.96

Sequence Information

Coding Sequence
ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGTCACGAAAATCAAGGATTGCGTGTCCGTTCAGATAAAGGAAAATGACGAGCTGCCCACCAATGTCTGCAGGAAATGTGTGGACAATGTCACTAACTGGCACATATTTAAAACTGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTCATAAAGATGGCAGCCTACTAGAAGAGGTGAAAATAAAAAGTGAACCATTGTCTGATGGAGCATATGATGATGGAGTGGTTATTGATGGTTCATATGCTGAAAATGAGAATGCTCCAGCAACAAACAAGTTCCAGCCTGAAGGCCCTCCAATCTTGGCTTCGTTGGGTCTCACACCAAGAAGTGATAAGAAAAATATGGATCCTCGAATGGATTGGCATCGAGTCCATGCAATATTGGACATGGTTCAAGACAATGAGGTGATTGATTCCCTACAATCAAAAGAGGAGAATGATGTTTTACAACACTCTGACCATGATTCTGACACAGAGGCAGAGCTCCAACCAGAAATAGATGATGACTTTGTAGACTGTAAGACTGGGtacatatgtaaaaataaaaataaaatatcaaaacatcCGAAATCATCAACTGCTGAATACAATGCTAAAGTGAAGCAAGTCCAAACACTTAGAAAACGTAAATCAATTGTTCCAAAACATTGTCCACGACCTAAAAACGCCTGGCAGTTGTTATTCACTGATGACCTACTAGAATTGATTGTCACATCTACCAATGAAAATATCGCAAGCACTGGTAAGGGAGCAGCGCCAACGAGCGTCAGCGAAATAAAAACGCTTATCGGAATTCTGTATTTGCACGGCATAACGAGGCCGACGCAGCAGAAATGCGGTGACCTTTGGAACGCCGCGATCGGCGTGCCGTGCGTCAGAAACTCCATGAAACATGAAAGATTTAAATTTCTCCTGCAAAACATGAGTTTCGATGAAGATGACGACATTATACAGTTTGATATTATGAAACGTATGCGGAAAGTGTTCGAGATTTTCGCTATAAATTGCAGAACTGCTCATGAAATTGAGAATGTGGCAGTTATTGATGAGATTATTGTTCCCATTTATGGTCCTTGCCCCTttcgatataatattaataataaaccatTGAGACGTGGTTTGAAAATGGTGTTGCTTGTGGATTCGTCTACATTCTATGTGAGCAATTTGGATGTAATAACGGACCCTTACTTTGGTGCTGAAGACATTACAAAAAAGTTAGTTCAACATTTGGCTGGTTCATGCAAGACGATTGTAATGGACAGTTGGTATACTTCATATTCTCTAGTTCAGTTGCTGAAAAATGAGTATCAGTTGTTTAGTATTGGTGCATTGAATCCCAGCAGTGAATTGATTCCTCCAATATTTTTGTCTCAGTATAGAAAATCGCAAACATTCATGTCAGGGTTCATTGATCATGATATTACACTTACATCCTCTGTGAATTCTGAATCAAAGTCTGTGAATGTTTTGACAAATGAGCCCCGATTTTATAGGAAAGGTCATATGAATCAAACAACTGTGATTTCTGTATACAAGAAACATCAGTCTGCAGTTGAAGTGGTGGATGTACTTATGAACTATTACACCACTATGCAGCATACCAATGATTGGACATTGTCTTTGTTTTTTACACTATTGAATATAGCTTCTGTGAATGCTCAGGTGTTGTGGTGTTCTCAAGCAAAAACACAAGTGACTCAGCGTCGTTTGTTCATACGAGACTTGGCTTTAAGCCTGTTGGAAAATGAGCCGCAACTATCGCTGTCTCCTATAAATGTCGCAGAGGGAGTGGAGAGTGAGAAAGAGGAAGAAGAAGACGATGACGAAGAGATGAATGAGCCGGTGCAAATGATGACGAAGATGCCCAATATGCCTGAGGTGTCCATCACCGTTATGCGGCCCACCGGCGAAACGCTTCAGTCGCGCCAAGGCATCCACCAACTGGCTTCCAAAGACTGTCTCGTGTGTGGTCGCACCTACAGATACTCGCACAATGCGCGCAGACATGAACTCACGGCTCACAGCTTCGACAGGTACACCAACAAAGTAACACCCAGCAAAAAGTCACTTTCTCATCTTCAGCCGAAGCTTAGACCTAACCCTTTCAATCCCAAAGCACGGTTGATGCCAAATCCTATTAGCCATAAGATGCAATTCATGAATAAAGCTATACCAGCGAAAATAGTGCCCATGAATAAACTCCTAACAACTCAAAAGCCGATTCCTATCAAATCGTCGAAACCGCAAAATAATTTGCCGTATCCACTACGTATCAAAGCTCTTAAAGATTTACAAATTAAGAAAAAGGAACCGCAGATTTTGAAGACTTTATTGACGACAAAGCCTGAGGTTTTGGTGTCTGAGcccgaaatattaaattctGGCCCAGAGAGCCCTGAAACATTGATTTCTGAACCAGAAATCGCCTCATTCCAAGTAGAAGCAATACTATCGGAGCCAGATGCAGATGCTTACGATCCTAACCAAGGCGAAGATGATGGCGATGGTGTAATACATAATAATCAAAGCCAGAACTATGATACTGTTGACATGGATTCTGAAAATGAGATTGAAATAGCTCGTCAGCAAGGTGATGACCACGAAGAAGTCGAGGAGGTCGAAGCAGATGAACACGTGGAACAGGATGATGAAAACAATATGGATGAAAATCCAAGTGAAAATGGAAAAGATCGTATTGATGACACAGCTGAAAGTCAAGATAATATAGAGGAAGACGGTCTCGAAATCAAGTCCGAGAGACACATGAAGGAAGTAGATGAAGGAAATCATGAAGATATACAAATTAACCATGAAGAGATTGaccaagatgatgatgatgatgacaatatgCCTTTAGCACCGGTCGTCGAAATTAACGAGGAAATTCTAGGTAACACTTATAACAGCGAGCAACACGAGGAATTCGAGGAAGAACTGGACGAAACTGGCGATCTTAACGAAACGGTCGACGAAGAACAGGTCAAAGAACTCGACCCCAACAAAACATACGTCACTAAAACCCAAAAGGAGTTCATAGAAAAATATCGTGACATAATTCAGCAAATCAATACTAAACGTTGCTTGTGTTGCGACAGAGAACATCCGCGTAGAAAAGCGGTCATACAGCATTTGCAGAAAAATGGACACAAGGTCCCGAAACACACGTGTTACAATTGTGTTGTCACTTTCGGACATATCGGCGCCTTGCTCAGCCATATGAGGTCCAACTCGTGCACTAATTTATGGAAGataatatatgatgatgatggaattGGTGACGACCAGGTTCTAGAAGACGAGCCTAAGGAAGTTAAAGTCCAATACAAGGATATATTCAATGCTAGATCATACGCTTGCAAACTCTGTCCTGCTAAATTCCAGCTGAAACAGTTTATAATGAAACATGTTGCAGATAACCATGAAGATGGCCAATCTAGGGTGCCGCTTGGTTGCGTTCACTGCCGCGCTAGGTTCAAGGACAAGAGTTTGTTGAAGAAACATATTCGAAAAGGCGACTGCACTATATACATAGCATGCGACTTGTGTTCAGAACAGTTTAACAACATGCAGCATTTCAACGATCACGCTTTAGCCGTCCACGCCGGCAGTTTCGATCAGACAGACAATCCAAGCAAATGTGTTGATGGCCGTCCCACCGACTGCCCTCTCTGTGGAAAGAAAAATAGTAGCTATCCGAATTTAGTGAGACATTTAAAGATGATCCACAACGAGGAAACGCCGCATCATTGTCAGCACTGTGAAGCTAAGTATGAAACAGCTACCGATCTTAACAAACACATTTACATGGCGCATTCTCAGAGGTCTTTGGGAATGTCGAATGCTGAGCCGGACATGTCAATAGTGAAGGAGGAAGCCGAGGAGTATCACTATTCGTGTACGGAGTGTAATGCTATATTCGAAACTGTCGACGCATGGACCGACCACCAAGTCGCCGAACACAACCAGGTGGCGCACCACTGCGACCAGTGTGACAAAAAGTTCTTACGGCCCTCTGAGCTCGCTGAACACAAAAATACTCACTTGAGGGTTAAGTTCTACCCCTGCAGTGTATGTCCCAATTCGTACAGCACTCCGCAAAAGTTGTCTGAACACGTGCAGCAAGTTCATCCTGGTGTCGGGGCCGCTGCGGCTGGCGAATCTGAGTTCTTCTGTGACATATGCATCCGAGCATTCAAAAGTCGCCAAGCTTACTCGAACCACATGCGTATTCACGCCAAAGTACCCACTACCAACAGGAAGCCAGGGGAAATCGGCAAAGGTTTCCCACCTCAAATTATTGGTAAGCCTATCAAACAATTCCCTATGGTTCAACCTGGGTTTGTGTCCTTTAAACCAAACTACAATATTCCCAATGCACCATACTCTTGCGATATTTGTGGCAAAGGATTCATgcacaagaaaaatatttggaAGCACAAGAAAGTCTTGCACGCTGATATTTTGAATGATAGAAATGATAGTGAAGATAATACTATGCAAGCTTCTACCGAAGAGGATGAATTCAACCCCGATGAAAACGGTGCCATATTGTCGACACCGCAATTCAATAGTTTTAACTTTACCAACTTCACGAATAATATTCAGCAACCACAACAGGAGGCAATGCCTTACTCCTGTGAGTTATGCCTAAAGCGATTCCCGATTAGAACTAGTTTGTGGAAACATAAACGCGCTAAACACGGAATCGTAAATCTGGGTAACAGCCCCGAAACACAGACGCAGTCTGGATCTAGTGAAACTAGTAGATCCAGCTGCACGATATGCAGAATAACATTTACCGACAAGAAATCTTATTATCGTCACAGGAAAAATGTCCACAAATCTACCGTACAAATGTGTAAAATATGTGGAAAACCTCTCAATTCCACTTTGGAGTTATATGAGCATTTGAAGGCTGCCCATGCTCGAGAACTGCTAGGGTACAACGCAAATCAAGGGTCTATCAAGCAAGATATGAAGCAAGAAGACCCTGATTATGACAACGATAATGAGGCCAACGACCCTAGCGTGGACTACCAAGCGAGATACCCGTGCGACACTTGCGGAAAACAGTTCGTTGGCTTATTAGCCCTACAGAACCATCAATGTGTTAACCAGATACCGTCTCAGCCCCAAACGTTTGACTGTGAGATTTGTCACAAGAGTTATACCTCGATATCGGCTCTAAAGAGTCATCGCGGTTGGCACTTACGTTCACCGGACGGCAAGGCGGCCGCCAACAATACCGGCCTCTGGATGCCACAGCACAAAGTAACTAGTAAAATAAGCAAACACGAGGTCATCGACCCTTCTCAACTCGCCAAGGTGACAATAAATCCAACTGCTACGGGCCCCGTTGCCGCCGTCGTCGCCAAACGGAGACTTCCTCCGGAAGTAGAGGTCACGGTGGTCAATCCAAACAAGAAATTGCGTTCCGACGATTCCGTCGAATTGGATCAACAAAATTCCGGTTCGATGGAAGATAGATACTGCACGATCTGCGACAAAGAATTTACTAAACGGGCGGCGTATCAGCGTCACATGGACGAAGTACACCAACCGAATTCCGTGTTCTGCCCCGTTTGCGACAAGAGTTTCACTCGGAAATCTACGTTGCTCATTCACATGAAGAAACATTACGAGGGCGGCGAAGGTAGTTCCAGCATTACGGAACAAAATGACGAAGAACAGTATGCGTGTGACTTGTGCGGTGCGCAGTATGACAGCGAACAAGGTCTAAGGTCACATAGAGTACGACAACACGGAGAAGACGAGTCTGCGGAAGAATCAGAAGATGACGGCAACGTCCCTATAGCTCCTCCTGGAGAATTTACTTGTGCACAGTGCGGGGACGGAGTCGCCACTCCTAGAGACTTGATCGCTCACCGGACGATGCACTCGACTCCCACCAAATTCTTTTGTAACATATGCAAGGTGTACTTCGCCCGGGCGTTGGACCTGTCGTCCCACACGCGGGCGAGGCACGCCGACAACGAGAAAGTTTTCTTTCCCTGTGCCATGTGCGATAGGTTCTACATGAACAAGAAGAGCTTACAACGGCACATCGAGATGGCTCACTGA
Protein Sequence
MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLVTKIKDCVSVQIKENDELPTNVCRKCVDNVTNWHIFKTVCERTQNKLQSLIHKDGSLLEEVKIKSEPLSDGAYDDGVVIDGSYAENENAPATNKFQPEGPPILASLGLTPRSDKKNMDPRMDWHRVHAILDMVQDNEVIDSLQSKEENDVLQHSDHDSDTEAELQPEIDDDFVDCKTGYICKNKNKISKHPKSSTAEYNAKVKQVQTLRKRKSIVPKHCPRPKNAWQLLFTDDLLELIVTSTNENIASTGKGAAPTSVSEIKTLIGILYLHGITRPTQQKCGDLWNAAIGVPCVRNSMKHERFKFLLQNMSFDEDDDIIQFDIMKRMRKVFEIFAINCRTAHEIENVAVIDEIIVPIYGPCPFRYNINNKPLRRGLKMVLLVDSSTFYVSNLDVITDPYFGAEDITKKLVQHLAGSCKTIVMDSWYTSYSLVQLLKNEYQLFSIGALNPSSELIPPIFLSQYRKSQTFMSGFIDHDITLTSSVNSESKSVNVLTNEPRFYRKGHMNQTTVISVYKKHQSAVEVVDVLMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWCSQAKTQVTQRRLFIRDLALSLLENEPQLSLSPINVAEGVESEKEEEEDDDEEMNEPVQMMTKMPNMPEVSITVMRPTGETLQSRQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKVTPSKKSLSHLQPKLRPNPFNPKARLMPNPISHKMQFMNKAIPAKIVPMNKLLTTQKPIPIKSSKPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPDADAYDPNQGEDDGDGVIHNNQSQNYDTVDMDSENEIEIARQQGDDHEEVEEVEADEHVEQDDENNMDENPSENGKDRIDDTAESQDNIEEDGLEIKSERHMKEVDEGNHEDIQINHEEIDQDDDDDDNMPLAPVVEINEEILGNTYNSEQHEEFEEELDETGDLNETVDEEQVKELDPNKTYVTKTQKEFIEKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYDDDGIGDDQVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVADNHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTIYIACDLCSEQFNNMQHFNDHALAVHAGSFDQTDNPSKCVDGRPTDCPLCGKKNSSYPNLVRHLKMIHNEETPHHCQHCEAKYETATDLNKHIYMAHSQRSLGMSNAEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQVHPGVGAAAAGESEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPGEIGKGFPPQIIGKPIKQFPMVQPGFVSFKPNYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEDNTMQASTEEDEFNPDENGAILSTPQFNSFNFTNFTNNIQQPQQEAMPYSCELCLKRFPIRTSLWKHKRAKHGIVNLGNSPETQTQSGSSETSRSSCTICRITFTDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSIKQDMKQEDPDYDNDNEANDPSVDYQARYPCDTCGKQFVGLLALQNHQCVNQIPSQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKISKHEVIDPSQLAKVTINPTATGPVAAVVAKRRLPPEVEVTVVNPNKKLRSDDSVELDQQNSGSMEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYEGGEGSSSITEQNDEEQYACDLCGAQYDSEQGLRSHRVRQHGEDESAEESEDDGNVPIAPPGEFTCAQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00851013;
90% Identity
-
80% Identity
-