Ppra062646.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- ZFY
- Assembly
- GCA_951640165.1
- Location
- OX621264.1:1176376-1187633[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.025 4.1 10.0 6.6 2 21 155 174 152 175 0.88 2 33 8.1 1.3e+03 2.1 0.1 3 23 183 203 182 203 0.92 3 33 0.042 6.8 9.3 1.4 1 23 208 231 208 231 0.95 4 33 0.0011 0.18 14.3 4.0 2 23 237 258 236 258 0.95 5 33 1.7 2.8e+02 4.3 3.3 3 21 263 281 262 282 0.93 6 33 0.018 2.9 10.5 1.2 2 23 324 346 323 346 0.95 7 33 0.0049 0.8 12.2 1.0 1 23 379 401 379 401 0.98 8 33 0.0082 1.3 11.5 0.9 1 23 407 430 407 430 0.97 9 33 0.0019 0.32 13.5 0.2 1 23 439 462 439 462 0.97 10 33 0.14 22 7.7 9.3 1 23 470 492 470 492 0.98 11 33 1.3 2e+02 4.7 0.3 3 23 653 672 651 672 0.96 12 33 0.057 9.2 8.9 1.3 1 23 677 699 677 699 0.97 13 33 1.9e-05 0.0031 19.8 0.4 3 23 706 726 704 726 0.95 14 33 1.7e-05 0.0028 20.0 0.5 1 23 762 785 762 785 0.96 15 33 0.00014 0.023 17.1 4.0 2 23 792 813 791 813 0.97 16 33 5.7 9.2e+02 2.6 0.9 5 23 823 842 822 842 0.95 17 33 6.6e-06 0.0011 21.3 0.5 2 21 970 989 969 990 0.94 18 33 0.014 2.3 10.8 2.1 2 23 1022 1044 1022 1044 0.93 19 33 0.67 1.1e+02 5.5 0.2 1 23 1049 1071 1049 1071 0.96 20 33 4.3 6.9e+02 3.0 6.4 1 21 1074 1094 1074 1095 0.95 21 33 9.4e-05 0.015 17.7 0.4 1 23 1109 1132 1109 1132 0.96 22 33 0.00013 0.021 17.2 1.7 1 23 1138 1160 1138 1160 0.98 23 33 4.7 7.6e+02 2.9 2.0 1 23 1194 1217 1194 1217 0.90 24 33 0.0044 0.71 12.4 1.1 2 22 1343 1363 1342 1366 0.89 25 33 0.4 65 6.2 0.0 3 23 1370 1391 1369 1391 0.95 26 33 0.047 7.7 9.1 0.5 3 23 1398 1419 1397 1419 0.97 27 33 4.1e-05 0.0066 18.8 0.2 2 23 1425 1446 1424 1446 0.97 28 33 1.7 2.7e+02 4.3 1.5 2 20 1450 1468 1450 1470 0.91 29 33 8.9e-06 0.0014 20.9 1.2 1 23 1496 1519 1496 1519 0.95 30 33 0.0009 0.15 14.6 0.5 1 23 1525 1547 1525 1547 0.95 31 33 0.2 32 7.2 0.1 1 23 1553 1575 1553 1575 0.97 32 33 0.01 1.7 11.2 0.3 1 23 1581 1604 1581 1604 0.94 33 33 0.00013 0.02 17.2 0.5 2 23 1611 1633 1610 1633 0.95
Sequence Information
- Coding Sequence
- atgagCCGGCAAGTCGACATAAAAGCTTTGGTGTCGCATATAGTGCGTGGAGATGGGGCTGATAGATGCAGAATATGTATGGGAGAAACAACGGAAGGGCAAGTGCATTTAGAAGACACAGTTATGATGGATGGAGACAAACCAGTTACCCTCGCTGAGCTGTTAGAAGGCATCACAGGAGTTGAGGTGCAGCTGGATGATGACCTGCCTCTTGGACTGTGCTCCACCTGCTCACTATCAACCATAGAAGCAGCCAACTTCAAATCCTTATGCTCCAGATCTGCCTTGCAATGGGACACCTCCGTAAAACTCCTTAACGACTTACCTGAAAAACCAGAGTATAACAATAGAATGATAGTAATATTATCAAAAGACTCCATATCTGTTACTACTGAAAATTTTAAGAGTAAATCTCCAAAAGAGGAAAAAAGTGACTATGAAAATGTAAAGAGTCACAAATGTCACTGTCCATATTGTGGAAaacaatttatgtatgctcaCCATTTGAGCCAGCATTTGAAGGAATCCTCTGATTATGTGCGAGCATGTCATATATGTGCAAAAATCATGTCTAGAGAAGATTTAGTTGCACATTTAATCACAATACATGATCGAGAACCTTTTGACTGTAAAAAATGCCCTGCAATGTTCTTTTCGTACAAACAGTACAAGTTGCATTTAGAAAAAGCTCATAGATCTGGAGCGTGCACCTGTGGAGAATGTGGAAGGAGATTCAAAAGCAAGCATGCTTATTATGCCCATCAGTCTGTCCATATGTCGAAGAACTGTCCCAATTGTGATGAATTGTTCCGTAATCAGAAATGTTACCATTATCATGTGAAGAGATGTTGTAACCTAGATAAAACTAGGTTAGATCTTCATCACACTAAAAGTAAAGTTACAATATCAGTCAAGAagaaaaacagaaatattaaaGTTGGTTTAAGAGGTAGTGCAGACTCTGAATGCTATTGTGATTACTGCAAAAAGAAATTTGCAGGAAAGAAGTTTGTAGCTGCTCATATCCAGATAGTTCACATGAAGAATACGCATCGACCTTGCATTTACTGCGGTAAATCTTTAGCGGCTGCCCATATGTCAACTCATGTCAAAAAACATGAGTCAACAGAATCCTACCAATGTGGTCACTGTGGTATTGTCCTCAAAACTAAACTGGGGTACAGCCAACATCTACGCTTACATACAGGAGAAAGACCGTATGAGTGTAAATTCTGCGGAGAAAAATTCTCTGCATCGTCCAGACGTTCGGAGCATATACGTAAAATCCATCAAGATTCAGACGCACTGTTAAAATATGCTTGCGAATTATGCCCAGCAAGGTTTAGATTACCGTATAGGTTGAAGAAGCATATCAGTACAGTGCATAGAAAAGATGATGCCTTGCAATTTGAATGTACTATATGCCATCATAAATTTAGCAGTTGTCGAGGATTACTCCATCACAGCCGGATTCATCAGGAAGTTGTGGTTGGAAAAAAACAGACAAGGGCTCTCAAAATTACAGAAGAAGTTGTCGAGAACACACCACTGCTACCGCACAAAATCTGCGGGCCGTGTCAACAAAACGTTAGCACACTTCTACCATTCATTGAACTATGTAAAGCATCGGCGAAAAAGTGGAATGAAATTACAAACAATTTACTAAAACTGAACCCATGCAATCAGACAAAAAACCTCTATGTTTGCTGTGGGGAAACATTTGACACACTCAGAGATACAATACGCTGTCCTTATCCCAGAATCAAAACGAAAAAAGAAGCGTTAAAATTCTACAGATTGCGATTAAATCGCCAAAAGTTTTATGAGAATCGAATTAAAGTAGTTAAACCCAAAAAGTCTGAAAGAAACGACAAAATGATATGCTACGAATGTGGATTTCAAAACAATGATTTATTCAAGTTTAATAAACATATTGGAAATTATAAGAAGAAAATGTGCGGGCAGTGTTTGAAAATTTTCGATATTTCAGCGTTTAAAGTACACTATGAGACCCATAATTTGGATATTTACTGCTGCGACCTATGTCCTCAAACGTTCGAGCTCAAAGCGGCGTTTTTAGCACATAAATCAAAACACACCAAGGACGCTATCATTTGTTCCGAATGTCAACAATCATTTAAGAACGCTTCAAATTTGAACAAACATGTAGTTAAACATAAACCAGTAGTTTGTGGGTGTGGGTCATATTTCTCCAACCGAGGATGTTTCTTTACTCATAAGAAACATTGTAAtcaacacaaaaatattaaaacccaGTCTGAATTCATTTGTGATTATTGTAAAGctgtttataaaagaaaaagcgCTTTGAAGACACATATTAGGCTCATTCATACGGTTGGGCGGTCGCTACAGTGCGAGTTCTGTGGTAAAAAGTTTTGCTCTCCGGCACATTTGAGGGAACATAACAATACGCATTTTAATGTGAGCGATCGATTCGTTTGTGAATGTGGGGCCAAGTATGCGAGTAGACGTGGATATAGCAGGCATTTTAAAAAGTACCACACTGATGGGGAAAAGTCAAGTGGAAATTTGGAGAAGGACTTAAAAAAACCACCTAACAAAATCGTGGACGAGGAGGCACTACCGGCGGCGCTCTGTCGTGCCTGCTCCGATGCCGCCGTTGCCGCTCTCGCCTTCCTCAAGCTCTGCACACAGGCGAACCAGCACTGGAGCCACGCCACCAACTACCTCACTCAAGTCCACGAACCGGCTAACGAAGACAAAGCATACTTCATCTTCTATAACGATGAACATACAATCATCAAAGATCAAATGGAAAGAGTTCCAAATAAACAAGTCGCTTTAAAACGATTAAACATGAGATTTTACCCAAATTTAGACAACAGAATCAAAAGACAGAAATTTCGTTATTACACGAAATGCAGTTGCCCCGACTGTGGGAAGTCATTTTCAGCGCCGGATTATCTAAACCGTCATCTGCGAAATACTTTACAGAGGGCATGCATTAAATGTGGCATAGTTATGCCTAAGAATGATATGGCGAAACATATGTCTGCAGAACATGATATTCATTATGCCGAGTGTAGTATGTGTCATGAGTTGTTTGAGACGAAGACTCTTTTGAAGCAGCATATGACCGAAACACATTCTGTTAACACATATTCTTGTAACGTTTGTGGAAATGGATATTTGAACGAACGCGCATTGCGGTCCCATGTATATTCCCATTCTTTATTCCATTGTAAAGCTTGCAGTAGaagttttgaaaataataaatgctaTAGATACCATCAGAAACAATGCAAAAAAGTTGATGCACCTACGACCGTGTTTAAATTTTACACGTGTGACAATTGTGGAGTTACGTACAATCGTAAGCCTTCTCTACGGATTCATATGATCCAGAAACATCTACACGTCTTGCCTTATGTCTGTCAAACCTGTGGGAAACGGACGTCCACTTTAGGACATTTGCGTTCCCACGAAAAAGTCCACAAGGCCGAGAGGAAAGTCTTCGAATGTTTTTGCGGCGCCAAGTTGAGAACTGAGTTGGGATACCAGCTCCACCAAAGAATCCACACAGGGGAAAGACCTTATGAGTGTGAGCATTGTGGAGATCGGTTCCTATCCTCTTCTAGAAGATTAGATCATATCAAAAGGCGTCACAGAGGGGCTAAAGACTGCCCACACGCTTGTGAAAAATGTACGGCGCGTTTCATGCAAGAAGAGTCATTAGTCCCCATCGGTGCGTGCGTCACCTGTGCCAGCACAGCGCTGGCCGCCCAAGAATTTCGAATTTTCGTCAATAATTCTGCCAAACTCTGGCGAAAAGCACTTCTGAGCATTACTTCCCTCCCATTTGCTGCATCTCCTCCGATAACATCTATATGTGCAGTGATCAAACCAAGTGACTTGTCCATCCAAACTTTTAAAGACTATAACAAAAGTGAcccaaaaactatattaaatCGCATTCTGAATCGCACCACTAAGAAAGTCGTCGAGAGGAAACCGCGTGGCGCTCGCACAGGACCACCTTGCAGTTGCACAGATTGCGGCAAAGGGTTTTTAAGCCCTTATTATCTAAACATGCATTTGCGAAACAGTGGGCATAAGGAAGCCTGCAATATATGTGGTGCTCTATTCGTCAGAGGTAAAGAAATGAAGGACCATTTAGCTTCCGTACACAACGAACATATGATACTATGCCGCCAATGTCCCTTACTATTCACAACTGATGCGCAGTTGAAGAAACATGTAAAAAAAGCCCATGCTTCTGGTGCTTTAACTTGTGCCGATTGTGGTCGTACTTTTCCTCGTCCTGCGTCCTTTGAAACGCACACTCAAATGCATACTGTCAGGACTTGTCGAGCCTGTGGGATGCAATTTACGAACAGAGGTTGTTATAGAGAGCATAGATCTCAATGTGAACCAGACGCGAAGCCTAACACTCAAGATGTGCCACGTAATCGACGATCTAACATCCGCGATCCAGCCCAATTCACTTGCGACCATTGCGGCAAGACGTACAACTCCAGGCCGCAACTAAAAAACCATATATTGTGGATTCATATGGATATACGACCTCATCAGTGTCAATGGTGCGGAAAGAGGTTTTATACACCTGCAAGGCTGGCTGAACATACAGTTGTGCATACGCGCGTTCGAAATTTCGAATGTGACATTTGTGGTGCGAAACTAGTGTCCAAAATGGCCGCTGTTTACCATAGACGAAGACATACTGGCGAGCGGCCTTACGAGTGCGAGGACTGCGGAGAGAAGTTTATATCAGCATCAAGGAGGTCGGAACACGCGAAAAGAAGGCATAATAAAGGCGTTCGTGTGCCTTGTTTGCAGTGTCCTGCTAGTTTTGTGAGAAAGCATGAGTTGAAGAAACATATGGAAAAAGCACATAGGGGTCCATTAATAGAGACGGTGTTAGTGTGGTGA
- Protein Sequence
- MSRQVDIKALVSHIVRGDGADRCRICMGETTEGQVHLEDTVMMDGDKPVTLAELLEGITGVEVQLDDDLPLGLCSTCSLSTIEAANFKSLCSRSALQWDTSVKLLNDLPEKPEYNNRMIVILSKDSISVTTENFKSKSPKEEKSDYENVKSHKCHCPYCGKQFMYAHHLSQHLKESSDYVRACHICAKIMSREDLVAHLITIHDREPFDCKKCPAMFFSYKQYKLHLEKAHRSGACTCGECGRRFKSKHAYYAHQSVHMSKNCPNCDELFRNQKCYHYHVKRCCNLDKTRLDLHHTKSKVTISVKKKNRNIKVGLRGSADSECYCDYCKKKFAGKKFVAAHIQIVHMKNTHRPCIYCGKSLAAAHMSTHVKKHESTESYQCGHCGIVLKTKLGYSQHLRLHTGERPYECKFCGEKFSASSRRSEHIRKIHQDSDALLKYACELCPARFRLPYRLKKHISTVHRKDDALQFECTICHHKFSSCRGLLHHSRIHQEVVVGKKQTRALKITEEVVENTPLLPHKICGPCQQNVSTLLPFIELCKASAKKWNEITNNLLKLNPCNQTKNLYVCCGETFDTLRDTIRCPYPRIKTKKEALKFYRLRLNRQKFYENRIKVVKPKKSERNDKMICYECGFQNNDLFKFNKHIGNYKKKMCGQCLKIFDISAFKVHYETHNLDIYCCDLCPQTFELKAAFLAHKSKHTKDAIICSECQQSFKNASNLNKHVVKHKPVVCGCGSYFSNRGCFFTHKKHCNQHKNIKTQSEFICDYCKAVYKRKSALKTHIRLIHTVGRSLQCEFCGKKFCSPAHLREHNNTHFNVSDRFVCECGAKYASRRGYSRHFKKYHTDGEKSSGNLEKDLKKPPNKIVDEEALPAALCRACSDAAVAALAFLKLCTQANQHWSHATNYLTQVHEPANEDKAYFIFYNDEHTIIKDQMERVPNKQVALKRLNMRFYPNLDNRIKRQKFRYYTKCSCPDCGKSFSAPDYLNRHLRNTLQRACIKCGIVMPKNDMAKHMSAEHDIHYAECSMCHELFETKTLLKQHMTETHSVNTYSCNVCGNGYLNERALRSHVYSHSLFHCKACSRSFENNKCYRYHQKQCKKVDAPTTVFKFYTCDNCGVTYNRKPSLRIHMIQKHLHVLPYVCQTCGKRTSTLGHLRSHEKVHKAERKVFECFCGAKLRTELGYQLHQRIHTGERPYECEHCGDRFLSSSRRLDHIKRRHRGAKDCPHACEKCTARFMQEESLVPIGACVTCASTALAAQEFRIFVNNSAKLWRKALLSITSLPFAASPPITSICAVIKPSDLSIQTFKDYNKSDPKTILNRILNRTTKKVVERKPRGARTGPPCSCTDCGKGFLSPYYLNMHLRNSGHKEACNICGALFVRGKEMKDHLASVHNEHMILCRQCPLLFTTDAQLKKHVKKAHASGALTCADCGRTFPRPASFETHTQMHTVRTCRACGMQFTNRGCYREHRSQCEPDAKPNTQDVPRNRRSNIRDPAQFTCDHCGKTYNSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGEKFISASRRSEHAKRRHNKGVRVPCLQCPASFVRKHELKKHMEKAHRGPLIETVLVW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -