Ppra039337.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- Zfy1
- Assembly
- GCA_951640165.1
- Location
- OX621252.1:1393151-1406364[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.53 87 5.8 0.1 1 23 299 323 299 323 0.95 2 21 2.1 3.4e+02 4.0 2.9 3 23 376 396 374 396 0.95 3 21 0.014 2.2 10.8 0.2 2 23 437 459 436 459 0.94 4 21 3.7e-05 0.006 18.9 2.8 2 23 482 503 481 503 0.97 5 21 0.00016 0.026 16.9 3.9 1 23 510 533 510 533 0.95 6 21 0.011 1.8 11.1 0.1 1 23 539 561 539 561 0.93 7 21 0.00018 0.029 16.8 0.6 1 23 567 589 567 589 0.98 8 21 0.0007 0.11 14.9 1.2 1 20 595 614 595 616 0.95 9 21 0.059 9.6 8.9 3.3 1 23 776 798 776 798 0.96 10 21 0.00042 0.068 15.6 2.0 2 23 805 827 804 827 0.92 11 21 2.6e-06 0.00043 22.5 3.2 1 23 833 855 833 855 0.98 12 21 2.4e-06 0.00038 22.7 4.4 1 23 861 883 861 883 0.98 13 21 0.0002 0.033 16.6 0.2 1 23 889 911 889 911 0.98 14 21 0.002 0.33 13.5 0.4 6 23 921 938 921 938 0.98 15 21 0.00024 0.038 16.4 4.0 1 23 944 967 944 967 0.97 16 21 1.7 2.7e+02 4.3 0.0 2 23 1023 1043 1022 1043 0.93 17 21 2.3e-05 0.0037 19.6 2.6 1 23 1049 1072 1049 1072 0.94 18 21 4.4e-07 7.2e-05 25.0 3.7 1 23 1078 1100 1078 1100 0.98 19 21 4.8e-05 0.0078 18.6 0.8 1 23 1106 1128 1106 1128 0.98 20 21 0.0062 1 11.9 0.1 1 23 1133 1155 1133 1155 0.97 21 21 0.0025 0.4 13.2 1.3 6 23 1165 1182 1163 1182 0.96
Sequence Information
- Coding Sequence
- ATGCGACAAAACAATGTGGAAATTAGTGGTTTACCCGAAAATAAGTCTGAAAACCTTGTGAAAACCTTACAAAATATCGCGAAGGTAACTAGTTGTGACATTGCTGACAGCGACATTATGCATATTACAAGAGTAGCCAAACTAAATAAGGATAATAACCGCCCACGCACTGTTATTGCAAAGCTCTACAGCCCCCGCCAGCGTGACAACCTTCTGGCTGCTGTTGGAAACTTTAACAAAAAACATCCCTCGGACAAATTGAACTCGCATCACTTAGGCATAGGAGATTACCTAAAAATATGTGCTAGTCATCCATACTTTCGCTGGTTATCATGTAGTAATGCTGTGGAACAGTATCTTCAGGGTGACGGGGCTGATGGCTATGCTGGTAGTGCCACTCATAAGATGATCCCTATCCTTTACTCGGATGCTGCTTCCTACCATCCCTCCagagatattatcattattatggcTGATTTTATGGCTCATGATGTACAAGACTTCTCAAATGTCTGCCGAACTTGCGCCACTATTACAGAATTTGTTATCCCTATATTTGGCGGCGAAGGTCTGCAGAATAACCTTGCAGACAAAATACAGAAACATTTGCCAATACagGTATCCGAGACAGACGCGCTGCCGCTGGTGGTGTGCTACCAGTGCGCCAGCACGCTGCTGGCGTGGCACGAGCTGGTGCAGTGCTGCGTGCAGGCCGACGCCGCGCTGCGGGCTCAGCTGGCCGCGCAGCCCGACCAGGAACAAAAGTCAACAAATCTGAAATCGAACTCAACAGAAGATGAGGATTCCCAAAGCAAGTCGCACTATTACTGCGTCGTCAAAACAATTCTCAACAAACATTTTACGAGCTTGAACCTCGATGATCTAGACGGAAACTTCGTTTGCGAGAAATGTAATCGTTTAACTTTGACGACTGCCGAATATTTAGCAGATCATTTGATGAGTGAACACCCAGAGATGTTTGAAAAGAACTATGAGCACACCTTACTTTACACATTCGTAAAAAACTTTATTACGTTCGAAGAAACGTTACTATCTGATGACTCAGACAGAGATAATGATTCACTAAATAATGAGAAATCTCTGAAAGATTTACCTAATCTATTTTGTCCATTCTGCACAAATGTCTTCACATCGTCCACAAGACTTATCTGCCATCTCAACAAACACATAGAAGTATCGATACAGGACGGAGTTATATGTTGTGACAATATGTACAATCATAAAAAACGTTTCGTCCAGCATTTGCAAGAAAACCATGTAAACAGAAGAATCGATAAATCTCTTAGTGTTTGCAAATCTTGTGGCTTTTCGACAGAGAGTAAAACTGCGTTACAAGAGCATATAAATGAGGCGCATACGGAACGAAAAATAGTCAAAGCAAAAAAGAAACCTAACCCTAAAAACCAGAAGTATATCCCAGTGGAATGCCTCAAATGTAAAAAGACatttttcaataaatacaacatgttaACCCACATGAGAACCCATGACAAACAAATAGCATTATACTCGTGTGATAAATGTACAAAGAGCTATAGAACTTTATCGAATCTAATTCATcataaaaatgaaaaacatgagggtattttaaattttttatgttCGGAATGCGGTGAAGCTTTCCCTACCAAATCGGCACGGGATGTTCACTCGCGGCTTCACACGGGaattaaaccttataaatgtgAACAGTGTGGCAACTCCTACCGCGCGAAGAACTCGCTCAATCGCCATTTAGAGGTGCACCTGGATATAAGGAAGTATGAATGTGAAATTTGTTCGAAAAGATTCAGGAAGAAAACGCACTTGGATTATCATATTGGAAGGATTCAGAACTATGCTTTATGCAGTAATGGAATTCCCGAACCCAAAAACGTTCATATTGGTGTTGCCTCCAGTGGCTTTACCCTGTTGGCCGGCCAAGAGTGCTCCTCACCAAAACGGAAACTGATGAAAAAAGTAACGAGAATTGTTTGTTGCAGGGACCCCTGCATTCTGGACGAGGACGAAATATACTCGTCAGACCATTCGGATGATGAGCCACTGGCAACCCTTGCCATACGGAAGGCATCTAACATATATAACAATTTCTACCAGGCTTTACTGAACTTTAGAAATCATTTAGTTACAGACCACACGAATGAGGAAACTTATCCAGATTTTACTGACTCCAGTCACTCCGAACCCGAAAACGTAGATAATTTTGATGACCTAACACACTATAATATGCGTAAAGACAGAATGGATGACGAAACTAGACAAGAACTGAGCGAAGTACAAAAGAAAGTCAATGGAAAAGTCTTCTACACTTGCAAAATCTGTGGAAAAAACCTGAGCTCCTCGCATACATATGTGTtccataaaagaatccatacagGCGAGAGACCTTGCGTTTGTCACATATGTGGCAAACAGTTCCGAGCACCAAACGGCCTGCAACGACACCTCACAGAAACACACGAAAAACTAAAACGATACCATTGTAATTTCTGCCCCAAAAACTTTGCTAACTCCCAGAATTTGAAGCAGCATATGCGGATACATACGGGCGAAAGACCGTTTGTGTGCTCTCATTGCGGGAAACGGTTTACGCAGAGTGGCTCCCTACACGTGCATTTGAAGACCCATAGCGAGCAGTTTCCTTACGTCTGCGCAGAATGTGGGGCCAAATTCCGTCTGAGATCTGGACTAGCTCGCCACCGACTAAAACATACAGGGGAACGACCACACGCGTGTCCTTGTGGCAGGGCGTTCCGTCAACCACATGAATTAAAAGCGCACACTCTGTCACACTCTGGAGCCAGGCCCTTTACTTGTACTACTTGTGGAGCAACATTCAGACAGAAACGAGCATTGAGGCATCATTCCAAGCGAATGCACGAAGCAGACCTTGCTATACATACCCAACCAGTATACAACAACATTGGGGTATTTGAAAGACGGGAGGTCAAACTGCGTGAGGAAACGAAAGAAGAAGGGACTTTAAATGAAGTCATATTGAAGCCGAAAACGTTAACGGTAGGTGAAGATGGAAGAAAAATTGTAGAATGTGGAGTCTGTGGACGTCGTGTTGCCGCAAGCGGATGGAAACGGCATGTCCGCGCCCATTCATCAGCTCGTAGACATAGCTGTCACACGTGTGGACTGTCCTTCACCGACAGTGGAAACTTATCGCGGCACACCAAAGCTGTCCACGCTAATTTTCGGCCCCATACTTGCAAGATTTGCGGGAAAATGTTTACAAGAAACGGACATTTGGCAGATCACATGAAATCACATTCTAATAGAAGGGAATTCGTGTGTCATATATGCGGAAAGGCGTCTAAATCGAGTGCAGCGTTACGAATGCATAAGCAAATGCATGAAGGCTTTAAGTTCGAGTGTATGGAGTGTGGAGCCTGGTTCAAACGCCGCACGGAACTGACCGCCCACGTCACCGTGCACACCGGGGAGAGGGCCTTCTCCTGCCTCTGCGGCAAGACGTTCAGGTTGCGCAGTCAGTTGACGACGCATGCGAAGATACACAATAAAGATAATTAG
- Protein Sequence
- MRQNNVEISGLPENKSENLVKTLQNIAKVTSCDIADSDIMHITRVAKLNKDNNRPRTVIAKLYSPRQRDNLLAAVGNFNKKHPSDKLNSHHLGIGDYLKICASHPYFRWLSCSNAVEQYLQGDGADGYAGSATHKMIPILYSDAASYHPSRDIIIIMADFMAHDVQDFSNVCRTCATITEFVIPIFGGEGLQNNLADKIQKHLPIQVSETDALPLVVCYQCASTLLAWHELVQCCVQADAALRAQLAAQPDQEQKSTNLKSNSTEDEDSQSKSHYYCVVKTILNKHFTSLNLDDLDGNFVCEKCNRLTLTTAEYLADHLMSEHPEMFEKNYEHTLLYTFVKNFITFEETLLSDDSDRDNDSLNNEKSLKDLPNLFCPFCTNVFTSSTRLICHLNKHIEVSIQDGVICCDNMYNHKKRFVQHLQENHVNRRIDKSLSVCKSCGFSTESKTALQEHINEAHTERKIVKAKKKPNPKNQKYIPVECLKCKKTFFNKYNMLTHMRTHDKQIALYSCDKCTKSYRTLSNLIHHKNEKHEGILNFLCSECGEAFPTKSARDVHSRLHTGIKPYKCEQCGNSYRAKNSLNRHLEVHLDIRKYECEICSKRFRKKTHLDYHIGRIQNYALCSNGIPEPKNVHIGVASSGFTLLAGQECSSPKRKLMKKVTRIVCCRDPCILDEDEIYSSDHSDDEPLATLAIRKASNIYNNFYQALLNFRNHLVTDHTNEETYPDFTDSSHSEPENVDNFDDLTHYNMRKDRMDDETRQELSEVQKKVNGKVFYTCKICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHEKLKRYHCNFCPKNFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYVCAECGAKFRLRSGLARHRLKHTGERPHACPCGRAFRQPHELKAHTLSHSGARPFTCTTCGATFRQKRALRHHSKRMHEADLAIHTQPVYNNIGVFERREVKLREETKEEGTLNEVILKPKTLTVGEDGRKIVECGVCGRRVAASGWKRHVRAHSSARRHSCHTCGLSFTDSGNLSRHTKAVHANFRPHTCKICGKMFTRNGHLADHMKSHSNRREFVCHICGKASKSSAALRMHKQMHEGFKFECMECGAWFKRRTELTAHVTVHTGERAFSCLCGKTFRLRSQLTTHAKIHNKDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -