Ppra021269.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- -
- Assembly
- GCA_951640165.1
- Location
- OX621243.1:18153640-18153981[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-08 7.9e-06 27.5 0.0 4 42 4 42 1 44 0.83
Sequence Information
- Coding Sequence
- ATGAACAGAGCACTGGAAGAAGCTGTACGTATGGTTAAAGGACGACACATATCCCTGTCCAAAGCCAGTGTTCAATTTAATATTCCAAAAggtacattaaataataaaattcacggAAAAACGGCCCTCCAATGCAGAAAAGGGCCAGGGCAACTATTATCGGATGATGAAGAAGAAAAAATTGCTACTTGGATTTTAAATATGGCTAAAATTGGATATCCTGTCAACACAAATGATGTCAGAGAGACTGTTGCAaagatttttgaaataaaaggcTCAGATTTGAAGCCGGGAAAAAATTACAAAGGCACCCTAACATCACCAAACGACattcagaaataa
- Protein Sequence
- MNRALEEAVRMVKGRHISLSKASVQFNIPKGTLNNKIHGKTALQCRKGPGQLLSDDEEEKIATWILNMAKIGYPVNTNDVRETVAKIFEIKGSDLKPGKNYKGTLTSPNDIQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01264439;
- 90% Identity
- iTF_01264439; iTF_01264442; iTF_01264444; iTF_01264445; iTF_01264446; iTF_01264447; iTF_01264448;
- 80% Identity
- -