Ppra000481.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- Jarid2
- Assembly
- GCA_951640165.1
- Location
- OX621234.1:5770297-5797858[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-19 1.1e-15 59.8 0.1 8 89 743 821 737 821 0.92
Sequence Information
- Coding Sequence
- ATGGACAATAATAGCTTCGGTCATCAGGAACCCAACCAAATGGAAAATGATAGCGTCGGTCAGCAGGAACACAACCAAACAGATAACTTACCCGGCAATAAGGTTTCCAAACAACCCGTAGTTGTGTTAAAAAGACTTAAGCAAGGCCAAACAGCGCCTAACCAAAAAGTTTCTAAAGTTAAAAGAAAGTCTAGAGCTGGGAATATTAGGTTACTATCGAGAAGTCACTCAATGACTCTCAGAGATAAAAAacctgtaaatattattaaggccAACACGAAGAAGCGAAGGCACACGAGCACGGACTTTTCTGTTGATGATAATCGTCCTCTGATTAGTCTTTGTGGAAGTAATGCTGAACCTAAAGCTGGACCATCGGGTGCCACTCGGTCAGCTAAAGATGTGGCCTTAGATTCAGAAGTAACCGCATTAGCCGCACCAAAGGACAATGGACAGGCTGGTCCAATAATTAAAGGAAATCCAGTAGCTACCACCAGTGGCGgGTATTACGGTGAAGTGGAGATTCACCGCTGGATGGCCACATCGCTTTTGCCGGTAAAATGTCGACCTAAATCCGACCCGGAGCCTTGTCCTGCTAGCGATTGGTCTACAACAACCAACGTCAAAAATGCTTCCAAAGACATCTTCAGCAAAAGATGTTTGAATTGCGTGGCATGTGGAAGAATCGAGAATGTTATCACGTTGTCTCGACTTCTGAGAGAGTCTGAGGTGGCAGGGTCGCGCGCCATTCACCGCAGCGATTCCGCCATGCTGTCCGACTCGCAGGGCCAGCACTTGTACATAGAGCTGTTCGAGCCCTCCAACACAGAGCTTATGATCAAAGTAAAAATACGCAAGGTGCGAGACAAGGACTTCATCACCGCATGCCTCGTGCCGAGGTCGCAAGCCGACACCACTGCCGAGTTCAATCTCAGGGAACACGAGGGACTTGTTACAAATCTTATAGATATGGTGACGAAGAGCTTGGCGAAGCGGCCAGAGTCTGACCCGCCCCCTGACACGCCCCCGCTGTCCTCAAGTCCAAAGTGCGCGCGGTTGTCCTGCCTTCCGGAGCTTTCGAAAGAACCGCTGCCGGACTTTTCGACGGCGCCATCAGCAAACCTAGTAACATCATCTCCTCCAATTGCCGCTACACCTGTGGAGCAGTTGGAAGATGGTAATGGTAATTCTGGGTTGGACGGCGATATCGACTCATATTTACATAACTTGCCAATGGGTGGCCGACTAATCAATCTAAAGCAAGTTTTGTCAAATGACACGGACGAAATGGATGACTCGAACTCATCTGATATGGAATTAGTCTATAGTCCAGGTTCATCATATTCACCATGTGAGCTTCAGCTTGAAAACGTGCCAGAGGCTTCTGGTGCAGAGCCGAGcgagtataataatatacctgTACTTGATAATCCAAGTAAAGGTTCATGTGAAAAACCCGATGTGAGTGCCGGGCATTTAGTAGAATATTCAACAATGACATTTGCAGTAAATAAGGATTTATCGAACGAAGATAAATTATGTAACGATTCTGGTATGCACATGATCAGCGAAGTGCATGCCATAACAAATTCAAATATGAACCTCCACGGTTTACCCATAGAAACTAGTTCGTCAAGGGAGATACGGACTCAATCAATAAAATCACCCGATTTACATAACGGTTGTTCAAAAGAAGCGATGGTTCTAGACGCACCAAGTACCTCTAATGCCGGGCTGATCTCCGGTACTGATTGGGTCGCTGCGAGTCGTAAACCTAGCCCCGGTTCATCTAGTGGATCGCCAAGTGTCGTGTCGGATTCGACGCGGCCACCGTTTATGGTGTTCAAACACGAGGATATCCAGCCTCTTGAAACAATCGTAGTGGAGGATGACGACGTTGCCATCCCGCCAGAAAGCTCTCTTAGGGAAAGAATATTAGCCATAAATAGAGCTGCAAACGCAACTGCTCCCGAAACGTCTGTCCATACAGAGGACCTAGTAATGGATGCACCAGTGTTCAGACCAAGTCTCCAGGATTTCAGAGATCCAATCGCTTTCTACGAGAGCTTACTGCCAACTGTGGCAAAATACGGTTTGTGCAAAATAGTGGCGCCGGCAGGATTTAGGCCGAAGTGTACCCTAAACGACGAGGTCAGGTTCGACGTGAACAATCAATACATATCACGGCTGTTCAACCGTTGGGGGCCGGCTTCGAGAGAACTGTGCGCAATGAAGGCCTGTTTAGAGAGAGAGAACGTGCGAATGAACCGCCCGCCAAAGATCGACGGCGTGGAAGTGAACTTGTCGCAGCTGTACCACATCGTCCAACGCCACGGTGGACTGCACAATGTCCTGAACAAGGACAAGTGGATGAATGTGGCAGAGGAAATGCATTTCAATAAATTGCAATATGCCGTAAAGAAATTGGACTCAATCTATGTTACCTACATTTTGCCCTATGAAACGCTATCGCatgGGGAACGGCAAGAAATAATGCGTAGGGTCGAGAAGTGTTGGCACAAAAAGAATCAGCGTTTACTCGACCGCGCAATGAACCCACTGCACCAGAGGAAGCGGATACTGGGAGAATCCGAGAGTTCAGAAGAGGAGCTCGAAGACCCAGGTGCGGCGGTAGCCTTAGCTGAGGCCGAGGACTGTGTCGTTACCAGGTCCTGCAAAATGAATGGAAATAAATTCAAACGGGTGGCGGCGAATGCGCTTAACATCCGCTTACGAGGGATGACACCTTCTACTGCGGAGATAGAGGAAGAATACTGGCGAATCGTTCAGCTTGGCACCGAGCACGTCTTTGTGAACACCGCATCTATTGACTCGGGCGTGGAGGGATATGGCTTTGAGACAACCCCAGGAGAACCATATTCACAACATCCCTGGAATTTAAAAatgattaGTAAAAATACTGGAAACGTACTGCGCTCGATGGGCTCAGTGCTGGGCGTCACTTCGCCGACCCTGCATCTCGGCATGCTCTTCTCAACCAGCTGCTGGCACCGAGACCCACACGCAATGCCTTGGATGGAATATATGCACAGTGGACCGGCCAAAATTTGGTATGGAATACCAGACAAGCAGAGCGACAACTTCAGAAAAGCGGTGGAGACGCTATGTCCGATGATATGCCAAAATAAATCAATGTGGCTATCATCGGACATAGCGATGATCCCACCGATGTTGCTCCGGGAACATAATGTCTCCCTGTATAGAGTGGAACAGCACCCCGGGGAATATATATTAGTGTTCCCAAAGGCTTACTCGTGCTCCATTAGCACAGGTTACACGGAATCTGAGAGCGTATACTTCGCATCCAAAGCCTGGATTGCCGACGCGATGAATGTTTTTCAAGAAACGAGAAACAACTGCGAGCCAACTATGTTCCCGCTAGACAAGTTGTTCATCGACATGGCTGAAGACGAAACTATCTCGAAAGAGATGATTGAGTCCATTCGTCCGCATGTACTTAACATAATTCAACAAGAGCTCTTCTACAGAGACGAAATTCGTCGCCTAGGAATAACACTCCACTTTGGCcgGTCGCAGGACGTGAACGTCGCACGAAGCACTGATCGCTCGTGGAACGTTCGCGATCTTGATGAGTGCGAGTACTGTCGTCGCACGCTTTACCTATCTAAGGTTGTAGGATTAACAGGCAACAAAAGGGCGCTCTGCTTGGAGCATACACTTCTACTACTCCAGACTCCGATGTACCTCAACTGGGACCCTAGCAGGCTTGAGGGCGTTTACTACGTCACGACTTCGCGAATGGCAGCAGTCATCAGTAAAGTTTCAACCGATTTGGAGCGCCAAGGTTTGTTATTACAGACGGAGAGCGGGCTTGAAGCAGAAATGTGTATTGATACGCCTTAA
- Protein Sequence
- MDNNSFGHQEPNQMENDSVGQQEHNQTDNLPGNKVSKQPVVVLKRLKQGQTAPNQKVSKVKRKSRAGNIRLLSRSHSMTLRDKKPVNIIKANTKKRRHTSTDFSVDDNRPLISLCGSNAEPKAGPSGATRSAKDVALDSEVTALAAPKDNGQAGPIIKGNPVATTSGGYYGEVEIHRWMATSLLPVKCRPKSDPEPCPASDWSTTTNVKNASKDIFSKRCLNCVACGRIENVITLSRLLRESEVAGSRAIHRSDSAMLSDSQGQHLYIELFEPSNTELMIKVKIRKVRDKDFITACLVPRSQADTTAEFNLREHEGLVTNLIDMVTKSLAKRPESDPPPDTPPLSSSPKCARLSCLPELSKEPLPDFSTAPSANLVTSSPPIAATPVEQLEDGNGNSGLDGDIDSYLHNLPMGGRLINLKQVLSNDTDEMDDSNSSDMELVYSPGSSYSPCELQLENVPEASGAEPSEYNNIPVLDNPSKGSCEKPDVSAGHLVEYSTMTFAVNKDLSNEDKLCNDSGMHMISEVHAITNSNMNLHGLPIETSSSREIRTQSIKSPDLHNGCSKEAMVLDAPSTSNAGLISGTDWVAASRKPSPGSSSGSPSVVSDSTRPPFMVFKHEDIQPLETIVVEDDDVAIPPESSLRERILAINRAANATAPETSVHTEDLVMDAPVFRPSLQDFRDPIAFYESLLPTVAKYGLCKIVAPAGFRPKCTLNDEVRFDVNNQYISRLFNRWGPASRELCAMKACLERENVRMNRPPKIDGVEVNLSQLYHIVQRHGGLHNVLNKDKWMNVAEEMHFNKLQYAVKKLDSIYVTYILPYETLSHGERQEIMRRVEKCWHKKNQRLLDRAMNPLHQRKRILGESESSEEELEDPGAAVALAEAEDCVVTRSCKMNGNKFKRVAANALNIRLRGMTPSTAEIEEEYWRIVQLGTEHVFVNTASIDSGVEGYGFETTPGEPYSQHPWNLKMISKNTGNVLRSMGSVLGVTSPTLHLGMLFSTSCWHRDPHAMPWMEYMHSGPAKIWYGIPDKQSDNFRKAVETLCPMICQNKSMWLSSDIAMIPPMLLREHNVSLYRVEQHPGEYILVFPKAYSCSISTGYTESESVYFASKAWIADAMNVFQETRNNCEPTMFPLDKLFIDMAEDETISKEMIESIRPHVLNIIQQELFYRDEIRRLGITLHFGRSQDVNVARSTDRSWNVRDLDECEYCRRTLYLSKVVGLTGNKRALCLEHTLLLLQTPMYLNWDPSRLEGVYYVTTSRMAAVISKVSTDLERQGLLLQTESGLEAEMCIDTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -