Pvib017223.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- gata1-a
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000318.1:237474-246892[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 6.8e+03 -2.7 0.5 21 26 20 25 17 26 0.81 2 2 3e-15 1.5e-11 44.1 2.8 1 34 532 564 532 565 0.98
Sequence Information
- Coding Sequence
- ATGACTGCTGCGCATTTAAATCTTTATCAAGTTGATGAAACAGACCGTTTACCCAACGTATTATGCCCAGCGTGTACAAGAGATGTAGAACGATTTTACAAGTTTAAAGAAAAAGTTATCAAGAATAATGCGTTCCTCAAGTCGTACGTTTTTCAGCGAGACCGCAAAGCTGCTCAATTTTTGGGTCGTGGTAAAGATGAATCAAACGCCATCGTCGAACCATCAACGATGAAGAAACGCACCACCGTTGGCCCTGCGACATCGGTAAAACAGAAACGAACGCCGTCCAAAGCTTCGAAAGCCGGCGATTATCCAGAATCTGCGACCGCAACAACGGCCGAATGTTTACCATCGTTGAATAATTACGACAATTGCGAATTATCGAATACGTTTTTCGACAATAGTAACAAAGTCAAAGTGGAAATCATTCCGCAAGTGGATAACGACATGTATTCGTCGACAAGCGCCATATACAGTAGCGAGACGAAAAACAACGTCGTCGAAATGTGGCCTTCGTCGATGGCAAACGAAGAAGGCTCGCCTAATTTTCGTAATGGTCGAAATGTCGAAGAAATAGCGACGACGACCGTTGAAAACTCAGCCAAATCGCCCGATTATACCAGCGTCATACGTCACAGCAGCGATGATTACGGCAACAGTAATTCGTCGTACGATAAGTATATCAGCGTGCACGTAAAAGAGGAAATCTGCAAAGAGAATTCGGGAGAAGAGTACGACTCGGAGGATACGAAATCTGCGGCCTCGTTGACCTTTCGCGAAGAAGACGAAGATAAGCTGATTATTGACGAAGAAACTATGGAAGTTAAACCGTACAGCCTGCACGGTCGCGAGGGTGGCAAGGCATCAGATAGCTGTATTTTGTTACGAACATTAATCTCCACTTCGAACGCTGCCAATCAAGTAGCTCAATCAAATCAAGCAGGAAGGAGCGAAGCAATAAAGAAGCCGGCTACTTTCTCTCCTCAGATATTGGTGAGCGATATGACAGGTGGTTCGCCACATTCGCAAAATTCACCCAGTGGTGGCTCCAACACACCTACCTCAGAAAAAGGCAGTACCAGGAGAAAGCAACGATGCCCTACGAAATCGGCCAGCGAAATCGCGCTGGATGCGGGCAACGAAAGCGACGAAGACGCCGCCGAATTAGCGCCGCTTAGCGAGCAGCAGCCGCAGTCGATGATGTACCAGCAAGAAATCGTCAATATCAGCCCGGTCACGGTGACTTGTACGTCCAACGGACGCGAGGAAATAGTCGGATACAATCAGTCTCAATTTTTAGACGAGGTGTTATCCAGGCATAGTTCGCCGGCCACCACACCGCCCATGGTAATGCCTTCGCAGGCCGAAAGGTTACATAAAGCGTGCGACGTGCTGCTCAGAGCAGCCAGTAAAATTCAAGATTTACCGCCCGGCATACAACAGGAAGAGGTCGTCGTCGAAGAAGAAGAAAGTATAACGTTGTATCCTAATAGTTCCCAAATCGAAGGCCAGAGCGAACAAATCACCATTCGCCATAATCCAGTGCCGTTGTACGAGATTAATTTTTCCTCAAATATGTCCCAGCATAAAGAATGTAACAATTGTCACGCCGTTCAAACCACTATTTGGAGACGAGACAGATTCGGCAATATTGTGTGTAACGCTTGCGGATTGTACTATAAATTGCATAATTACGATCGTCCGTGTAGAATGCGCCGAGACGAGATACACAAGCGCAATCGTAAAAGAAACGCCAACGAAAATAAAACGAAGAAAACCAAACGTAATTCGAGCGGTACGTTCGAACTGAACGAATCATCCAAAGAGCAGGAGAATTCTAGCGGTTCGTATACGCCGCCGAGAAATTACAACGACAGCGCGAATCACGAAGCTGTGTCTGATCTCTACCATCCTTTCGGACAAGTACGAAAACGACGCCGAACCTCGGCGCCGGGTTCCTCGTCCGcgaccaccaccaccaccgtCGTAATAAAAGAAGAGCCCGAAACCGGTCAACAACCTTCGTCCGATGCCGAGCAAACGGTCGAAGAAATCAGCGTGAACGGTAACGATATAGCGGTCGCGTTGAATAACCACCTTTACAACCAGCCCTCGggcgaaaaattaaacatgtcCGCTTTTCAGCTCTCTACGCACTTCATGCCCATCAACGGAAAAGTGTACGAGGATTTCTCTAACGAAAATTCAATGAGCGAGACACCTTTGAATTTGGCAGCCGGTAGTCATTAG
- Protein Sequence
- MTAAHLNLYQVDETDRLPNVLCPACTRDVERFYKFKEKVIKNNAFLKSYVFQRDRKAAQFLGRGKDESNAIVEPSTMKKRTTVGPATSVKQKRTPSKASKAGDYPESATATTAECLPSLNNYDNCELSNTFFDNSNKVKVEIIPQVDNDMYSSTSAIYSSETKNNVVEMWPSSMANEEGSPNFRNGRNVEEIATTTVENSAKSPDYTSVIRHSSDDYGNSNSSYDKYISVHVKEEICKENSGEEYDSEDTKSAASLTFREEDEDKLIIDEETMEVKPYSLHGREGGKASDSCILLRTLISTSNAANQVAQSNQAGRSEAIKKPATFSPQILVSDMTGGSPHSQNSPSGGSNTPTSEKGSTRRKQRCPTKSASEIALDAGNESDEDAAELAPLSEQQPQSMMYQQEIVNISPVTVTCTSNGREEIVGYNQSQFLDEVLSRHSSPATTPPMVMPSQAERLHKACDVLLRAASKIQDLPPGIQQEEVVVEEEESITLYPNSSQIEGQSEQITIRHNPVPLYEINFSSNMSQHKECNNCHAVQTTIWRRDRFGNIVCNACGLYYKLHNYDRPCRMRRDEIHKRNRKRNANENKTKKTKRNSSGTFELNESSKEQENSSGSYTPPRNYNDSANHEAVSDLYHPFGQVRKRRRTSAPGSSSATTTTTVVIKEEPETGQQPSSDAEQTVEEISVNGNDIAVALNNHLYNQPSGEKLNMSAFQLSTHFMPINGKVYEDFSNENSMSETPLNLAAGSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00194848;
- 90% Identity
- -
- 80% Identity
- -