Pvib015952.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- gata5-b
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000268.1:186182-225684[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 2.4e-14 53.1 3.2 1 34 545 577 545 579 0.97 2 2 3.1e-19 1.6e-15 56.9 3.6 1 35 599 632 599 633 0.97
Sequence Information
- Coding Sequence
- ATGCACAAACGATGCTCTATTGCGCACGATGAAGACGATCTAAATTTACAATTCATTGATAAACCTCAACGTGCTCCATATTACCAATTTCACCCGAAAGACGAAACGGGGACTCTTTCAAAAGTTCGCGAAGAATTGATCGAAGAAGAATGCGAAACCAGCGAGCACCCACCGGGGCAACAGCCACCCCAATCCGCGACCCCTCAAGCTCCACCACCGGCCCATCAAGCTCAGCAGCCCCAGTCGCAGCAACATACACCGGAGGACGGTGAAATCATCTCGGAACAAAGTTCGGTCACGGTACGTGAAGATGAAGAAACCGGTCTGGAACAGCAACAGCTTTCAGATACGGGATCAGATCGCGGTTCAACGGTCGGTGCCGGGGACGTAGGTCAAAATGGCGATTCGAATACAAGGAGAAACTCTAAAACTCCGCCTTCGCCGATGCATGGAAGGGCTGTGCACATCACGCCTCCGGCAAGCGTGGTAGTGGAACAGGAAATTGTCGACGAGAGTAAAGTACCGAGTAACATAGTGATTAGAGAGCACGGCGGAGAGTTTCATATGAGTTATGTTCCAAAGGATGAACAAGTTATAAGGTACGCAGACGTTAATCATTTGGAAAAGCTACGATATCCGGAAAATCTAGAACCGTCGCAAAGCCCGGAGATGACGTATCCGCATTCGCAACAGGACGAACATCCGATTCGATTTCCCGACGTTgataatttggaaaaacttCGCTACCCCGAAAACCTCGAACAGTCGCAGAGTCCGGAGATGGTTTATCATCAGCAGCAACAACAGCAGAATTTATTATTCCAATGTCACAGCAACGCCAATAATAATATTACGAAAGAAGAACTCCCCATGTCACCGCATTTCCATCTATCACCTAACGAAAGTGCATTATCTGCTGTCGCCGCACACGCCGCCGCTGCACATCATCAATCTCATTTTCATCTCTCGCAACATGATAACAGCGCCCACGATCATCAAATTGTATCGTCCAATTATCCAAGTGTTATCCGGTTCGGTTTCGGGGGCATTCTCGCCAATAGCTCCGATACAATGTTCGAAGTCGATATTAAACCagatattaataaaaattgggaAAGCACAATGTTTTCAAGATCTTCGTCCATATACGGTAACAACGCGCATTCGGTGCCACCACAATATTTTTCACCCGCTAGTCCTGTCAATAGCGACGGAAACGTACATAATCTCAATGCCAACAACGCTCTATGGACGACGCAAATCAGCTCGGACGAAAATTATTCGCCAACGAATACGAAACCGAGCATAGCTAGTATTCAAACGTCGAGCGGATCTTTGAACGGATCATTACCAGCGATCACGCAGCGATATTCGTCGCATATTCCAACCTTTAGCCGATGCAGCCCGTCCTATTCGACCACTCCGGGATTCATGTCGTCCGCAGCCGATTCGACGCCTTGGTCAGCGCCCCCTGGGTTGGCCAATTATCCTAATACCGACGGGCAAATTTCCAATTACGTTACGATGCAAGTTTCGTCCAGAGGCAGAAATGCTGGCGCATTGACCTCGTTCTCAGCCGCTTCTTCTTTAGCAGCCCCAGACGAAATGGATTATTATGCTGAAGGCAGAGAATGCGTGAATTGCGGAGCAATTTCGACGCCGTTATGGCGACGTGATGGCACTGGACATTATTTATGCAACGCTTGCGGATTATACCATAAAATGAACGGCATGAATCGCCCACTTGTCAGGCAGCCAAGAAGGCTGACTGCTTCCCGCCGAGTAGGTTTAACTTGCTCGAACTGTCACACGAGCACGACATCGTTATGGCGTAGAAACTCGGTTGGCGAACCTGTATGTAATGCTTGCGGTCtctattttaaattacacaacGTAAATAGGCCATTAACCATGAAAAAAGATAGCATACAGACTAGAAAAAGAAAACCAAAGGGCGGAAAAGGTGACCATTCGGCGCCGAAACAAATCAAACTCGAGCAAAATGGTTCAGAACCAGAATATATGATCATCTCGTACGATCAGTTTTCCCTTTAA
- Protein Sequence
- MHKRCSIAHDEDDLNLQFIDKPQRAPYYQFHPKDETGTLSKVREELIEEECETSEHPPGQQPPQSATPQAPPPAHQAQQPQSQQHTPEDGEIISEQSSVTVREDEETGLEQQQLSDTGSDRGSTVGAGDVGQNGDSNTRRNSKTPPSPMHGRAVHITPPASVVVEQEIVDESKVPSNIVIREHGGEFHMSYVPKDEQVIRYADVNHLEKLRYPENLEPSQSPEMTYPHSQQDEHPIRFPDVDNLEKLRYPENLEQSQSPEMVYHQQQQQQNLLFQCHSNANNNITKEELPMSPHFHLSPNESALSAVAAHAAAAHHQSHFHLSQHDNSAHDHQIVSSNYPSVIRFGFGGILANSSDTMFEVDIKPDINKNWESTMFSRSSSIYGNNAHSVPPQYFSPASPVNSDGNVHNLNANNALWTTQISSDENYSPTNTKPSIASIQTSSGSLNGSLPAITQRYSSHIPTFSRCSPSYSTTPGFMSSAADSTPWSAPPGLANYPNTDGQISNYVTMQVSSRGRNAGALTSFSAASSLAAPDEMDYYAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLTASRRVGLTCSNCHTSTTSLWRRNSVGEPVCNACGLYFKLHNVNRPLTMKKDSIQTRKRKPKGGKGDHSAPKQIKLEQNGSEPEYMIISYDQFSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -