Basic Information

Insect: Pseudococcus viburni
Gene Symbol: zfh1
Assembly: GCA_033439095.1
Location: JAVBJF010000038.1:223546-274129[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00031 0.03 15.2 0.2 2 21 75 94 74 95 0.94

2 9 0.00057 0.055 14.4 0.2 1 23 104 126 104 126 0.96

3 9 1.3e-05 0.0012 19.6 0.6 2 23 133 154 132 154 0.97

4 9 3.8e-06 0.00036 21.3 7.5 1 23 163 185 163 185 0.99

5 9 2.7e-05 0.0026 18.6 1.5 1 21 191 211 191 212 0.95

6 9 0.16 15 6.7 4.3 1 21 460 480 460 481 0.92

7 9 2.5e-05 0.0024 18.7 2.2 1 23 797 819 797 819 0.91

8 9 0.00069 0.066 14.2 9.3 1 23 825 847 825 847 0.98

9 9 0.0019 0.18 12.8 4.4 1 21 853 873 853 874 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00031	0.03	15.2	0.2	2	21	75	94	74	95	0.94
2	9	0.00057	0.055	14.4	0.2	1	23	104	126	104	126	0.96
3	9	1.3e-05	0.0012	19.6	0.6	2	23	133	154	132	154	0.97
4	9	3.8e-06	0.00036	21.3	7.5	1	23	163	185	163	185	0.99
5	9	2.7e-05	0.0026	18.6	1.5	1	21	191	211	191	212	0.95
6	9	0.16	15	6.7	4.3	1	21	460	480	460	481	0.92
7	9	2.5e-05	0.0024	18.7	2.2	1	23	797	819	797	819	0.91
8	9	0.00069	0.066	14.2	9.3	1	23	825	847	825	847	0.98
9	9	0.0019	0.18	12.8	4.4	1	21	853	873	853	874	0.96

Sequence Information

Coding Sequence: ATGGTGGTTAGTTTCGGTAAAATGTACTCTTCTCCGGCTAATCCTAGCTATAATTTCGATAGTTATTCGCATCGGTTAATGAATTTAGCCAGTTTATGGGGCTATGGTGgatTTCCTTTGGCACCCTCGGTGACCAGTAATCCTGTGTTTAAAGAGAGTAACCTGCCTTTTGACAATTCTTCGGGTGATCCCGAACCGTCGGAATATTCGTCTTCGGCTGTGAAATGTCCTCATTGTTTTAAAACTTTCGCAACATACGATGTATTGAAAGAACACATACAGATATGTCGATCCGAAAGGCCAGTCGCGTTTCCTTGCGTACAATGCAACGCAGCCTTTTCAACGCGAGATCAGCTGGATAAACACGAACAATTACATTCGCCTAATGCTCAAGTGtcGTGTAAAGTGTGCAACAAAACTTTCGCCAATGTTTATAGACTTCAGCGACATATGATCAGTCACGACGAGAGCGCCGTTCTACGTAAATTCAAATGCCCTCATTGTGAAAAAGCCTTCAAATTTAAGCATCATCTGAAAGAACACATTCGTATCCATAGCGGCGAGAAACCGTTCGAATGCAACAACTGCGGTAAACGATTCTCGCACTCCGGATCCTATTCGAGTCACATGACGTCGAAAAAATGCCTAATAATGAATCTAAAAGTCAACAATCGTAATAGAAACAACGACACCAAAGTATCCAACGGGCCTCAGCAGAACGCCGCCAATTACCCGGTCAGCAATCGTATCAGTCCGAGCAAACATCAGAAATCCATTACTAATTTAATCAACAACCACAACAACAATAAcaataacaataataataaaaataccgCTAACAATAACAATAATATCTTGTTCTCGCCCATATTACCAAAGTACAGCGAAGGTCACGGTATCCTACTACCGAATTATGCCAATTCAGCGGTCACCAACAACATACATTCGTTATATTTTCACTCGAGTTTGGCGATGAATCAGCATAATTTGCCTTACGCGTTTCCGCCTTCGTTGAATCATCTTCTGGAGCAATTCTCGATGACTCCTTTGAACGCCAATTACCAAGAGACCAAAGATCGAGACGATACCAAAGTTGATGGCATTCTGCAAAACGGCGACTTGCTGAGTAGCattaaaaaagaaacgaaatccGAAGAAGAAGACGAAGACGTATCGATGAAATCGCCCCAATCAATGGATGAAAAACGACCCGACTTGGAGGCGGTCAAACGTATCCTCGAGACAGTCAACGTCAATGTTACCAAACACCTATTCGGCGCAAATATACCAAAGTTATCGTCCGCCTCGTGCAGTTCCGGATGTCCAAGCGTTTCCAGCGAAGTACCATCGCCAGCTGTAGACGAACCGGCCAACGAACATTGTTGTAAATTCTGCGCCAGAACGTTTGCCTCGTACGGTGAACTGCAACAGCATGAGAAACATTCGTGCGGCAGAGACGAAAAGAAACCAGAAGGATTGGCGGCCAAGTTAGTCGATGTGGTGTCTAATCATCGAGAAGAAACCAACGGTACGTCGAATTGCAACAGCGACAGTGAAGATGATACGCCAGGCTGTGGAAAAGAGTACATGGTGACCGAAGATGAGgacTCTGAAACCATGGACAGTCGCAAAGTACGCGTACGTTCGCAAATCTCGGAAGAACACCTGATCATTCTCAAACAATGTTACGCCTTGAATCCGCGCCCCAAACGCgaagaactggaaaaaatttcgcaaaaagtAGGCTTCCCGATTCGCGTGGTCCAGGTCTGGTTCCAAAATAACCGAGCCCGAGATCGCCGAGAAGGCAAATTGGTGTACTCGCAATATACCCCGACCTATCCTGCGTTCGGCTTACCCCCGAGTACAGAATTTTACCAATCGCCTACGTCGTCACCGCAGATCGCAGCAGATCAACCTTTGGATCTATCGACGAAGAAATCGTTCAACTCTAGTCCAATGACGTCGCCGTATCGGTACGATTCGGACGAATGCGGCGCCGTGAATTTATCTAGAAAGTCGCCTTCCGCCCATCAAAATGCGCATTATGGCGAACGCAATCAGACACCTCCATTGATGGATGGTAAACTATCGAGAGGGTTACCGCAGAGAAATCTTACACCGAATGGTACTCCGGCCGGATTTTTTAATATGGATCGTATCATCTACGTTAATTCGTCTCAATCGCCGGTTACGTCCAGTAGTCCTAATTACAACGGTAGTTGTAGTCCGAATTCGTCTGATTCGTGGAAACAGGATTACCTGAATTCCAACGAAAGTCATGATCTGAAATATGGCGAAGATTCGATCGACGGTCAAACCGTCGTCACGCCGACCAAGAAAGCGAAGCTAAACAGTAACGTCGTCGACTCAGAAATAGAGGGTCAGTTCTCGTGTGAATTTTGTGACAAAACTTTTACAAAACAAAGCTCTTTAGCAAGACATAATTATGAGCATTCAGGTCAACGGCCACACAAATGTGATATCTGTTCGAAAGCTTTCAAGCACAAACATCACTTAGTCGAGCATAAACGGCTGCACAGCGGTGAGAAGCCATTTCAATGTACAAAATGTCTGAAACGATTTTCACATTCGGGATCCTACAGCCAACACATGAATCACAGATTCTCCTACTGCAAGCCATACAGAGAATAG
Protein Sequence: MVVSFGKMYSSPANPSYNFDSYSHRLMNLASLWGYGGFPLAPSVTSNPVFKESNLPFDNSSGDPEPSEYSSSAVKCPHCFKTFATYDVLKEHIQICRSERPVAFPCVQCNAAFSTRDQLDKHEQLHSPNAQVSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHIRIHSGEKPFECNNCGKRFSHSGSYSSHMTSKKCLIMNLKVNNRNRNNDTKVSNGPQQNAANYPVSNRISPSKHQKSITNLINNHNNNNNNNNNKNTANNNNNILFSPILPKYSEGHGILLPNYANSAVTNNIHSLYFHSSLAMNQHNLPYAFPPSLNHLLEQFSMTPLNANYQETKDRDDTKVDGILQNGDLLSSIKKETKSEEEDEDVSMKSPQSMDEKRPDLEAVKRILETVNVNVTKHLFGANIPKLSSASCSSGCPSVSSEVPSPAVDEPANEHCCKFCARTFASYGELQQHEKHSCGRDEKKPEGLAAKLVDVVSNHREETNGTSNCNSDSEDDTPGCGKEYMVTEDEDSETMDSRKVRVRSQISEEHLIILKQCYALNPRPKREELEKISQKVGFPIRVVQVWFQNNRARDRREGKLVYSQYTPTYPAFGLPPSTEFYQSPTSSPQIAADQPLDLSTKKSFNSSPMTSPYRYDSDECGAVNLSRKSPSAHQNAHYGERNQTPPLMDGKLSRGLPQRNLTPNGTPAGFFNMDRIIYVNSSQSPVTSSSPNYNGSCSPNSSDSWKQDYLNSNESHDLKYGEDSIDGQTVVTPTKKAKLNSNVVDSEIEGQFSCEFCDKTFTKQSSLARHNYEHSGQRPHKCDICSKAFKHKHHLVEHKRLHSGEKPFQCTKCLKRFSHSGSYSQHMNHRFSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01490845;
90% Identity: iTF_01262335;
80% Identity: iTF_01263251;