Basic Information

Insect: Pseudococcus viburni
Gene Symbol: -
Assembly: GCA_033439095.1
Location: JAVBJF010000052.1:463363-468709[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.36 4.8e+02 1.4 4.2 14 43 4 29 2 59 0.86

2 7 6 8e+03 -2.6 10.4 14 39 134 161 115 164 0.87

3 7 0.21 2.8e+02 2.1 0.4 12 29 167 184 162 195 0.80

4 7 3.8e-08 5e-05 23.7 1.5 18 44 213 236 204 236 0.94

5 7 0.016 22 5.7 3.5 17 40 248 268 241 272 0.77

6 7 0.0038 5 7.7 2.5 14 44 278 305 271 305 0.88

7 7 9.2 1.2e+04 -3.1 0.1 23 34 452 463 452 463 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.36	4.8e+02	1.4	4.2	14	43	4	29	2	59	0.86
2	7	6	8e+03	-2.6	10.4	14	39	134	161	115	164	0.87
3	7	0.21	2.8e+02	2.1	0.4	12	29	167	184	162	195	0.80
4	7	3.8e-08	5e-05	23.7	1.5	18	44	213	236	204	236	0.94
5	7	0.016	22	5.7	3.5	17	40	248	268	241	272	0.77
6	7	0.0038	5	7.7	2.5	14	44	278	305	271	305	0.88
7	7	9.2	1.2e+04	-3.1	0.1	23	34	452	463	452	463	0.78

Sequence Information

Coding Sequence: ATGAAAGCAGATACGAATATATTCTGTAACTTGTGCCAGAAAAGCGTCAACTACGAAGGTTTTCAGAATCATGTATCCAGCGATCATCTACCAAAATTAAATCTTACCTGCCCACATTGCGAAAGCCAACAGGCATCTCTAGCAGCTCTTCAATTTCATTTAAACTCCTTGCACAAATCTGACGACTTGGTACGAAATGTATTCCAATTCAGCGATCTATTTACTAGCTGCTCTGATATCAGTTCACATTCGAAGAAATGCGCCGAATGGATCCAGAAATCGTTTTCAATCGATGCAATAAACATCCTAGACAAAAAAGAAATTCGTTCGGTAATTAAGAGAAGTTATACTCACATACACAACGAATACAATAATGATTGCGAATTATGCGACAATGAAGAGAATCACAGCCACTGCGGTTATTGCAGTAGAGAATTTCTACGCAAGTGCCATTTAAAAGTTCACTTATTAAGAAACCATTTATCGTTACCTGACCACATTAAGAGAACTTTGAATATATGCGAAGATTGCGGCAAAATATATCCTACCAAGAACATTTTAAAGCAGCATTACATTACGCACAATAAACGCGTTACTCGAAAGAGGATTAAATATCAAAAGAAGCAAGTACCGcaaacttgtaatttttgtgataaaaaaatctccaataGGAGTAATCTAAAAAGGCACTTGGTAAGGCAGCACAGAACAGAAATTGACGCTCCTCCGAGCTATAATTTATTCACTTGCGATCACTGtaaatgtgaattttcaaataaaagcaGCGTCAAAAGGCATATTGAAAATCTTcatatgataaaaaaatcaatgaaaaaaaatattagttgTTTTCATTGCGATCAGGAATTCAATTCGATTAAGAATCTCAACGCTCATTTAACCATTTCGCACCAAGTCAAGATTAATGAggaaaaactacaattttatcATCTAAATGaattctatACTTGGAAACAAGAAGAAGAAATCCGTACCAATTCTAGATTTATCCAGTTACGTGGTTTGCGAAAACAATGCAATAAAAAGGGCGAGGAAAGATCGGTTTTGAAATTCGTTTGCAATAGATCTGGCATGTTTCATTCGAGATCTAACGGAAAGCGAGCTTATAGGGTCAAAGGATCGagtaaaatagGACGTTATTGTTCGGCTTACATCGACATAGTTTTCGAAGAAAACGGTTCAGTGAACGGTGTTTATTGTTCTACTCATTCTGGGCACGACAACGATCTCAGATATTTAACCCTGACTATGGACGAGAAGCGTGAAATTTACGaGAGAATCAAAAGCGGAGAATCATTCGCGTCGATTTTGAACGAAATCCGAAACGACGTTGGAAAAGAAATCAAACGTAAGCATTTAGTGACCAATAAAGATCTCCACAACATCGTTGCAACATTCAAAAGGATCTCACACGTTTCTCAAGACGATAACTCAGCTCAATCGTCATCTAACCAGCTGGAATCTTCGAACGATCCGTCGATagaaaaatgtgaccaaaatttcaacaatgatCTCGATCTATGTGCCGATTTATGGGTCGAGACGTGTCAACGTATGGTGCATCGTTTCGATCAAAATGAACTTCGTACCAATGCCTTTTGTAAAGATCCCAAGCCGAGAAACACTTGTCTCATTACAGATACCCATAAACAGGACTCTAGTTGCAACGCAGATTTCCATAGAGCTCCTTATCTGATCCACCACGACTACAGTTCTAGCAGTCCACCTAATTGTATGACCGACGAATCCTATAAACCAACGAATTACCATGATTATCAAAACGAGACAGTGAAGAACCTCAACAATTCGACGACGTGCTTCAACAACGTGGCAAAATCTGCAAATGCTAAACAAGTCAAAGAGTTTTGCAACGTTTCGGCCATTTCCAATGGCATTCACCTCAATAAAGACTTCTATCCGATCGATATCGTTGATGTGGATAATCATCGTTCGAAATCCTCTGTCGAATATAACAACGATGCAATTGACGACTCTCAAGCTCATTTTAGAAATACTCATCCATGCGACACGTTGCCTTCCAATACAAACACGATCATTATCCGAAATCAAGATCCATACTCGTACAACTCAGATAAATTACCTTCTACATCAAATTCAGAATCTGAGCACGTCATACATTCCATCGACGATAACGATTTTTCAGACACTGAGGTGGTGACTTGTAACGATACCAGTATTTTAGAAAACGAGTCGAAAACCCTGGCAGAAAATAAAGACGACCATGAAGTATCTGATTTACGAGACAGAGTCAATAGCGTTACAGCATTATTTAATATGGTCGAAAGTGAACTGGACGATCGTAAGAAGAAAATCATTCGTAACTACGTCGATAATATATTCAGAGTATTACAATACAGGTACATCAAACGTAGATCGAAAAAGAAACAAGATTCTCAAAAGCAACCAGCAAATAAAGAAAAGAacctaaaaaatcgattaccaTCCAaggataaaaaacgaaaaaagaaagtTTCTGATATTATACCAAATCAGCTTAGTGATTCATCCGAATTTGTGTCCAAGGTGTCTCATGCTTCACACACAAATCCGTTGAATAGTTCCACTATCGAAAATCTGGCACGAAGGCCAGATGCTGAATTTATGAGGTGGGATCGATATTGA
Protein Sequence: MKADTNIFCNLCQKSVNYEGFQNHVSSDHLPKLNLTCPHCESQQASLAALQFHLNSLHKSDDLVRNVFQFSDLFTSCSDISSHSKKCAEWIQKSFSIDAINILDKKEIRSVIKRSYTHIHNEYNNDCELCDNEENHSHCGYCSREFLRKCHLKVHLLRNHLSLPDHIKRTLNICEDCGKIYPTKNILKQHYITHNKRVTRKRIKYQKKQVPQTCNFCDKKISNRSNLKRHLVRQHRTEIDAPPSYNLFTCDHCKCEFSNKSSVKRHIENLHMIKKSMKKNISCFHCDQEFNSIKNLNAHLTISHQVKINEEKLQFYHLNEFYTWKQEEEIRTNSRFIQLRGLRKQCNKKGEERSVLKFVCNRSGMFHSRSNGKRAYRVKGSSKIGRYCSAYIDIVFEENGSVNGVYCSTHSGHDNDLRYLTLTMDEKREIYERIKSGESFASILNEIRNDVGKEIKRKHLVTNKDLHNIVATFKRISHVSQDDNSAQSSSNQLESSNDPSIEKCDQNFNNDLDLCADLWVETCQRMVHRFDQNELRTNAFCKDPKPRNTCLITDTHKQDSSCNADFHRAPYLIHHDYSSSSPPNCMTDESYKPTNYHDYQNETVKNLNNSTTCFNNVAKSANAKQVKEFCNVSAISNGIHLNKDFYPIDIVDVDNHRSKSSVEYNNDAIDDSQAHFRNTHPCDTLPSNTNTIIIRNQDPYSYNSDKLPSTSNSESEHVIHSIDDNDFSDTEVVTCNDTSILENESKTLAENKDDHEVSDLRDRVNSVTALFNMVESELDDRKKKIIRNYVDNIFRVLQYRYIKRRSKKKQDSQKQPANKEKNLKNRLPSKDKKRKKKVSDIIPNQLSDSSEFVSKVSHASHTNPLNSSTIENLARRPDAEFMRWDRY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01264017;
90% Identity: iTF_01264017;
80% Identity: iTF_01264017;