Pvib011233.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- -
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000145.1:827935-833905[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.4e-13 3.2e-10 40.3 0.1 3 44 91 131 90 131 0.97 2 6 1.7e-13 2.2e-10 40.8 0.7 3 43 186 225 185 226 0.97 3 6 2.3e-11 3e-08 34.0 0.1 2 44 327 368 326 368 0.96 4 6 0.00099 1.3 9.6 0.0 4 44 438 477 436 477 0.89 5 6 4.3e-15 5.7e-12 45.9 0.1 3 44 547 587 546 587 0.98 6 6 1.1e-11 1.4e-08 35.1 0.2 2 44 634 675 633 675 0.97
Sequence Information
- Coding Sequence
- ATGTTGACGGATAATATAAATATGAATGTCGAAGAAGAGGTGATTCTATGGGTCACGTCGGATCTTGTCGGAACGACTCCAGGGACTGCGGAAGTAGTTGAAACTTCGACGGTATCTGAATCTGCTATACCAGTCGCTTTGATCAGTCGGACTCACGATGAGCTAGATGATAGCCAAATCACTGAAACTTCGTACGAAGAGTGTAAAGGAGATTTCTGCGTTGTCGACGTGTCGCCACCTAAGGAGAAGAAATCGAGAAAACGAGGACTTGTTTGGCAGTATTTTACGCCAACGGAACAAGAACGAGCTCAGTGTTCATTCTGCCCGGCTGTGATATCGTTTAAAGGCAAATCTACGAATAATTTATTGAGACATTTACGTACTAAGCATTCAGATACTCCTACCGTTAAGCAAGAAAGGATCGAAAACTTTCAATCAGAAGATGGGTCGACGTATTATATTCTCTCTACCCCTGATCAACTGCAGCTTACTTCGAACGATgacaattttcaaACCGAAGATGGCGAAGACAAAGCTAACAAACGTCGAGGCGGTGTTTGGAAATACTTCATACTCGGTACGAATTCCAGAgctaaatgtaaattttgcgGAACCGTTATCTCGTTCAAAGGCGGCTCTACAACGAATCTCCTTCGTCACATGAAATCCAAACACACCAATATCAAAGTGCCGAATAAAGTTAAATCGGATGACTCGTTCGAGCTCTCTTCGACGAAAACTTTCTCTATTCAACATTCATTCGCCGAAATAGTCAACGAGTGCGTGAAAAGCGACGACGAGAATGATTTCACTGTTCATACGGTATACGACAGTCAAGGGGACGATATCGATCCCATCAGCACCGAAAGTATTACTACGTTGGCTTCGATGGATCCTCATTACTCGCACGAAATCGACGTTCAAGTTTGTATGCCTGAAGATGTTCACGAGACAACCAAAGAACGTCGCAAATCAGCCGTAGCttggaaatatttcgaaatggaGAACGAAGAACGTGCCAAATGTGGGGTATGCTCGGCGGTAATCTCGTTCAAAGGCGGCTCGACTGGAAACCTTTTACGTCATTTGAAAACCAAACATTCCGAACTCGATTTAACGCCTCCGGAGAAGAAAGAAGAATACGAAGAACCGGCGCCGGAAATCAAAGAAGAAACTTTCGATGATATTGAGAATCAAGAATTGGCCAAGTTCGTTCATCTGCTTAATCCGAAGTATAAACTGACCGGAGCAATAATACCGAAATTGAACGAAaaagaaatgCCGAAACGTATTCGTAAAAGAGGCGCTGCTCTGAGCTACTTTACAATCAACGATAACGAATCTGGTACTTGCCAATTGTGTTCTGCCGACGTTTTACTTAAAAATGGTTCCAAGGCTCCTTTATTGCGGCATTTGAAAGCCAAGCATCCGGATATCGATACCGTCCTGATATCCGGTGGAAATCAATCCGTGCTATCTGATGAATCAGTACAGGATATTCAGACTGATATGGAAACCGAAATTCAAACTAGTCTGAATATCGAAAATATTGAGAATATTCCTATGCAAGTTACCGGATCGTCTGATGAATCGcaacaaaaaGAAAAGGTAACCAGAAAAATGCGTAAGAGAGGATTAGTCTGGAATCATTTCGCACCACTCGAAGATGAAAAAGCGAAATGTATCACGTGTCCGGCAGTCATCTCGTATAAACGTGGCTCTACTTCTAATCTTCTGAGGCatatgaagaaaaaacatcCTGAAATTGATGTCAAAGATGAAGATCCATTGAAAGAAGAAGAAGTTGCAGAAAATGTTGTTGTTAATGATGAAGAAGAGGAAATGACTGATTATGAAACTcccGACGGTTCGAAGAAGAAAGTTCTCCGTAAACGAGGCCGCGTCTGGAACCATTTCAAACCAACTGCGCCGGATAAGGCGAAATGCGGTATATGTTCGATGATAGTAGTCTATTTGAAAGGCTCTACTACAAACCTGCTTCGTCATATGAAAAAGAAACATCCATCGATTGACCTATCTAAGGAGAAACCATTCAACAAGAAATTAGTTTACCCCAAAGAAACCGCTTTGGTCGAAGCTCCGCCGAAAGAACCATCTCCCGCCGATTTCCTCGGCGACACTGGCCCGAGCGATAAAGTGAACGCGATCTTCAAACGATCGGAAATCGTATTCCGGAAACATTTCGATAAATTCTTAAATCGCCCGGTCTCCGTAACGAAAAGTAAAATGTACGACGAGCAGTTGGCCAAAATGATCGTAAAACAGTATTGCCCTTTTACCATCGTCGAAAGcgaagaatttcgaaaattcgtccAAACTGTGAACCCTGGATACAGTTTACCCAGCCGCAAAACAATCTCGTCCAGATTGATACCAGAATTATACGAAAAATGTGCCGAAGAAGTTCGCGAAAATTTACGTAATATACGTTACGTAACCATTACGACGAACGGTTGGACATTGGTGAATAACGAATGCTATATCTCGATTACCGCTCATTTCATCGACGATAATTGCCTATTCCAGTCGTACCTGCTGGATTGCTTCAAATACGAAGAGAAACATACCGCTGAGAATTTGGCCGCCGAAATCAAGAGTATTCTGACCGACTGGGGCCTAATCCATAAGGTGAACGCTGTTGTCAGCGATAACGCTGCTAATATCACCGCAGCTATTCGATTAAGATCTTGGAGACATATTCCTTGCTTCGCGAATATGCTGAATTTAGTCATTCAAGCGGGTCTGTTCGAAATACGCGAGACTCACGATAAAGTCAAATCGCTGATCGATCATTTGAAAAAGAATCCGTTGGTGATGAAGAAACTCCATAGTACTCAGACTGAAATGGGCCTAGCAGAGACGAAGCTCAAACAAGACGACATTTCCAGATGGGAATCAACGTACGATATGTTCGGTCGACTTGTAACGTGTCGAAGTGCACTTCCATCGGTGGTCGAAGCTTTCGGTGAAACTGTGCCCATGTTGAGCGACCACGAAttggaaattatcgaaaaaaccTGCGAACTGTTGAAACCGCTGTTCGATATTTCCAACGAAGTAAGCGAAAAGAACATTACCATATCGAAGGTCATACCGTTGAGTAAATGTATCGGAAATTATCTGCAAAGAACGTTGAAAGACGATTTCCTCATGAAGGAGATCCATCAAATGGTTACTAAAATGTCGGACGAGGTGACGCTGCGATTCAGCGATGTCGAAGATAACACCTTGTTGGCCGAATCAACGTTGCTCGATCCTCGATTCAAGAACCAGGCTTTCACTAACGAAGAATCGTACGCGAATACGTACCATTCGATTTTGCAAAAAGCCAGCAGCGCCAAGGTATCCGAAAAAGCCGACGAAGAGAAACGAAACGGCGCCGAAGGTAAGAAGTCGTCGATTTGGGAAGAATTCGATTCCAGAGTTGTTCACGTCAGCGATGTAGCCAATCCGGAGAACGCTGCGGCCAGCGAAATGGATAATTACCTGCAGGAAGCGTTGATTGCCAGAAACGCCGATCCGCTGGTGTGGTGGAAGGAGAGAAAATCCGTGTATCCGAGATTGTTCGAGATTATGAAGCAGAGATTGTGTATCGCAGCGACCGCCGTATCGAAGAATTTTACCAATAGCGGGCAACTCGTGTGCGAGAAACGTAATAAACTCAGTTCGTCGAAGGTATCGATGGTGTTGTTTTTGAATCATAATTTGTAA
- Protein Sequence
- MLTDNINMNVEEEVILWVTSDLVGTTPGTAEVVETSTVSESAIPVALISRTHDELDDSQITETSYEECKGDFCVVDVSPPKEKKSRKRGLVWQYFTPTEQERAQCSFCPAVISFKGKSTNNLLRHLRTKHSDTPTVKQERIENFQSEDGSTYYILSTPDQLQLTSNDDNFQTEDGEDKANKRRGGVWKYFILGTNSRAKCKFCGTVISFKGGSTTNLLRHMKSKHTNIKVPNKVKSDDSFELSSTKTFSIQHSFAEIVNECVKSDDENDFTVHTVYDSQGDDIDPISTESITTLASMDPHYSHEIDVQVCMPEDVHETTKERRKSAVAWKYFEMENEERAKCGVCSAVISFKGGSTGNLLRHLKTKHSELDLTPPEKKEEYEEPAPEIKEETFDDIENQELAKFVHLLNPKYKLTGAIIPKLNEKEMPKRIRKRGAALSYFTINDNESGTCQLCSADVLLKNGSKAPLLRHLKAKHPDIDTVLISGGNQSVLSDESVQDIQTDMETEIQTSLNIENIENIPMQVTGSSDESQQKEKVTRKMRKRGLVWNHFAPLEDEKAKCITCPAVISYKRGSTSNLLRHMKKKHPEIDVKDEDPLKEEEVAENVVVNDEEEEMTDYETPDGSKKKVLRKRGRVWNHFKPTAPDKAKCGICSMIVVYLKGSTTNLLRHMKKKHPSIDLSKEKPFNKKLVYPKETALVEAPPKEPSPADFLGDTGPSDKVNAIFKRSEIVFRKHFDKFLNRPVSVTKSKMYDEQLAKMIVKQYCPFTIVESEEFRKFVQTVNPGYSLPSRKTISSRLIPELYEKCAEEVRENLRNIRYVTITTNGWTLVNNECYISITAHFIDDNCLFQSYLLDCFKYEEKHTAENLAAEIKSILTDWGLIHKVNAVVSDNAANITAAIRLRSWRHIPCFANMLNLVIQAGLFEIRETHDKVKSLIDHLKKNPLVMKKLHSTQTEMGLAETKLKQDDISRWESTYDMFGRLVTCRSALPSVVEAFGETVPMLSDHELEIIEKTCELLKPLFDISNEVSEKNITISKVIPLSKCIGNYLQRTLKDDFLMKEIHQMVTKMSDEVTLRFSDVEDNTLLAESTLLDPRFKNQAFTNEESYANTYHSILQKASSAKVSEKADEEKRNGAEGKKSSIWEEFDSRVVHVSDVANPENAAASEMDNYLQEALIARNADPLVWWKERKSVYPRLFEIMKQRLCIAATAVSKNFTNSGQLVCEKRNKLSSSKVSMVLFLNHNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01472610;
- 90% Identity
- iTF_01264066;
- 80% Identity
- iTF_01264066;