Pvib010385.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- ncor1
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000129.1:913219-923579[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-08 7.6e-05 23.2 0.0 4 43 588 627 586 629 0.97
Sequence Information
- Coding Sequence
- ATGGTCAGCGAAGATCGTATTTCAGCGTTGTTTTTGGACAATGTGTTTGATAATTTTGTGAGACGAGCTCGTCGCGAGGACTATGTCTGCGAAGGTATTTTTACATGCGTTGCGCTGGTGTATATGCGACGTCGCGGGCGCCTTGCTGTGGCTCGCGAAGAGGCGGAGTTTTGTCTGAGTGAACGCCATTTGGTTGTCGTTGCGGCAGCGAGGACCAGAAAAAGGGACGAGGAGGTTGGCGCTTGGACCGGGCCGGGCCGGGCGCACCTTTTCCCAGTGGTCGAATGCGTTTTGGTACCGGTCGTCGGAGGACCTTTATCGAATCCGGCTACATTACCTCTCGGTGGCAGTGGTAGTTTTAAAGTTTCTTCCGCTCAAGGTCCTTCAATATCTTACCCAAGTTACCCCGGAAGCAGCGAGTTGTCTTCTAGATATGTTCAGCCTAGTTCACAATATAATAGTACCGATAGACCTAGTTCCAACAGTACGAGCTCCTATAACGAAAATAATCATAGTTCGCCTGTGATCGGTAGAGGCGACCGAAATAGCACTAGTAATACCTCGTTGGGTGAATACATGCCTCCGAAATCGAGAGCCGTTTTGAATTCGGATCACAGGAGTAGCCATCCGAGCAATCGGATTAATTCGACTGAAAGCTATTCGGAAAGTATACTGAACACTTACCACGTAGATCATGGAGCGCCGCCGAATAAAAGGATTAAATATAACGAAGCGGTTAAACCGGAACTCCAGCAACCTCTCAGAGTGGATACCTCGGAGAGACCGGTGTATAATCCGCCGGTGGAAGCGATCTCGCCGACATTGCCGCCGCCACCACCACCTCCCCCGGCACCGCCGCCCAATTCGGTGCAGCAAAATGCAAACTCTCCGGAGACTTCCGCCGCCGCTGGATCTGCGGCCGCTGCTACGGAAACGAATGATAAACAAGACGAGGCTGTGATCAATGTAGATTCTTATAGTTGTAGTAATAATCCTACCGAGTTAATCGACCTACTCACCAAAATCGAAGACGAAATTCGCAAAACCGATCAGCAAATTCAAcaattgaaaaagaaacagAAAGAGATGGAAGAGAATACGAATTTCGCCAACGCCGCCGATAAAGTTGAACCGGAATGCGAAGAGATAGTATTACCAAAATTGATTCAAGTCGCGAAACATATTTACGACGAGAACTGGGATAAAGCTCGTATTTCACATCAGTTTTTCGTCAAATTCGGCCCATTAGAAGATTTAcCTGTTTATAACCAAGCTCCAGATACCGAAATATAccatgaaaataagaaaaaATACGCCGATTTGAAACCttttttaatcgataaaatCAGAAAAGAGAAACAAAGCAAGGAAGCTAGAGATCAAAATATCGCGATGACGTATAACAAAATGAGCGCCGATTGGAAACGTAAATTAGAAAAGattgaaaattcgcaaaaacGTAAAGTTAGAGATTTAAAGAATAGAGAAGTTTTCGAGAAAGTGTTTCCAGAGTTACGTAAACAACGCGAAGATAAGGAACGATTTAGCAGATCCGGCGGCCGAGTCAGAAGTGAGGCTGATTTGGAAGAGATCATGGATGGATTGCAAGAACAAGAGTTGGAAGACAAGAAAATGAGATCATACGCTGTGATTCCGCCTTTGATGTTAGATTCGAAACAGCGAAGGTATTCGTTCATCAATAACAACGGCCTGATCACGGATCTACCAAAAGTTGCCAAAGAAAACGAGTATTACAACATCTGGACGGAATCGGAGAAGGAAATATTCAAAGAGAAATTTCTCCAGCATCCAAAAAACTTCGGCGTCATCGCTTCGTACCTGGAAAAGAAGACGGTCTGCGAATGCGTCGCGTACTATTACCATAGCAAGAAAACCGAACACTATAAACGTTTACTAAGAAAATCGCGACGAACGAGAGCTCGCAATCTGCAGGGTAAGGCCAGCGGAGCGAACGCCGGCGGTTTGGCGAATCCGGGCGATATATTGTACAACAACACACCAGGCGTTACGACGCGTCTGCAACGCGAGCAAATCCAACAACAACAAAGACTGGAACAGCCGCAGAATCTGTCTGTCGCCGCGACCAACACGACCAGCAGTAATATTACTAGTATGGCGAGTAGTGCGTCGGTGACGGCCAATACGACGCCGGCTACAGCTTCGACGACATCCACAGTTACCGAAATAACACCTATGGATACCAGCACCGGTACCACTGGCAGTACGACGACCACCGGAGCAACGGCGGCTGAAAGTAGCGTAGAAATTTCAACTACTACGTTCCTGAATGGTGCCGAAGCGACGACAACTACTGTTGCTAGTTCGAATACAGAATGCTCGGCGAATGGTGCTGCAAAAACGACGAGTTCGGAGACGCCGACCAATAACGATACGATCGAAGCTGCAAAAGTCGTACCTGATACAGTATTAGATGGCCGGTCTGCCATTAGTCCGGTGTCGCCGGCTGGTAATGCTGTGACTAACGAAGCTGTGAAAAGtGAAAGTAAACCTGATATTaagaagaaagaaagaagaaaagacgataaaaagaaaaacgatACAAATACTCAAGTCGGTGATACGTCAGAAGAAGATACCTTACCATCTGAAAGTAAGATACGATTTTTACGTATTCGCCTACgcgaaaatattagaaaaaaatag
- Protein Sequence
- MVSEDRISALFLDNVFDNFVRRARREDYVCEGIFTCVALVYMRRRGRLAVAREEAEFCLSERHLVVVAAARTRKRDEEVGAWTGPGRAHLFPVVECVLVPVVGGPLSNPATLPLGGSGSFKVSSAQGPSISYPSYPGSSELSSRYVQPSSQYNSTDRPSSNSTSSYNENNHSSPVIGRGDRNSTSNTSLGEYMPPKSRAVLNSDHRSSHPSNRINSTESYSESILNTYHVDHGAPPNKRIKYNEAVKPELQQPLRVDTSERPVYNPPVEAISPTLPPPPPPPPAPPPNSVQQNANSPETSAAAGSAAAATETNDKQDEAVINVDSYSCSNNPTELIDLLTKIEDEIRKTDQQIQQLKKKQKEMEENTNFANAADKVEPECEEIVLPKLIQVAKHIYDENWDKARISHQFFVKFGPLEDLPVYNQAPDTEIYHENKKKYADLKPFLIDKIRKEKQSKEARDQNIAMTYNKMSADWKRKLEKIENSQKRKVRDLKNREVFEKVFPELRKQREDKERFSRSGGRVRSEADLEEIMDGLQEQELEDKKMRSYAVIPPLMLDSKQRRYSFINNNGLITDLPKVAKENEYYNIWTESEKEIFKEKFLQHPKNFGVIASYLEKKTVCECVAYYYHSKKTEHYKRLLRKSRRTRARNLQGKASGANAGGLANPGDILYNNTPGVTTRLQREQIQQQQRLEQPQNLSVAATNTTSSNITSMASSASVTANTTPATASTTSTVTEITPMDTSTGTTGSTTTTGATAAESSVEISTTTFLNGAEATTTTVASSNTECSANGAAKTTSSETPTNNDTIEAAKVVPDTVLDGRSAISPVSPAGNAVTNEAVKSESKPDIKKKERRKDDKKKNDTNTQVGDTSEEDTLPSESKIRFLRIRLRENIRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00194256;
- 90% Identity
- -
- 80% Identity
- -