Pvib002499.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudococcus viburni
Gene Symbol
JARID2
Assembly
GCA_033439095.1
Location
JAVBJF010000017.1:797505-809208[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-23 3.4e-19 69.5 0.0 6 89 1258 1339 1254 1339 0.94

Sequence Information

Coding Sequence
ATGAAAAGAAGATCGTCAGCTACTGGTTTAAATGAACGTTGTACTTCGCCTATCATCAAGCGAACCAAAGTACACgctcagcgaaaatttgctcaaGGCTCGAATAACTACGTCACAACACCTACTAAGCTACCAAAACCGAACGATCCTTCGACCCAACCTTTTTCACCGGAAATCAATAGAGTCGCCGACAACGATGGTcgtgaattgaataatttctcaaatttaccAACTATCGATGATTTTCTTACATTCCTTTGCTATAGAGAAACCGATGTTCTCCCGCAGAGATTAAATTACCTGAATACTCCGCAATTTGAAAGCATTCCGGCGAAAAAGAAACCTTTGAAATCGAATTCTACATCATCATCGTCGTTACCTTCGAGTAAATCTAGTATTGACCATGATAAGGCTAGTGATAAAgttaattcgaatttcaaaagtaaaaagaaaGTTCCTGAGTTTCCGTTACGTTCTAAAGAAATCAAATGTAAACCAATTATCAGCAAGACTTCTCGTTCTTTAGCGATGAAACATAATCAGAGACTTCGAAAAACCGTTCAAACCAAGTTTACCGAAAATAAATTACCGAATTTCAAAGCTAAAAATACGTTGAATAAATTTCCCGCTCCGAAgaATAATAACGACGTTAAAGTGAACAATGTTCGAAATCACAACGTCAGCAGAACGAATGCTGCTAAAGAAACGCCCAAAACCGTAGATCTAGAGATAAAACGTGTTACCAGAAGAAATTCTAATCTTAATgctttagCCGAAAAACCAGAAGTTGTCAAAACACCGGCTAAAAGATCTCAATCGAAATCATCGACATCGGTGACTAAAGAGCTTTCACTAGCCGTCGATAATGCCCACATTCCGGCCAAAAGACTGTCGGCGAAACCGCTTCGAGTTTCTGTAGCAAAAGTAACCACGCCCGTAATCTCGAGCCTTTCGCCAGTAAAAACAAGAAGCACGCGTTCAGCGACAGCGCGTCtcgaatcaaatttaaaaacccCTAGTACGAGTTCTCGACCGACGAGAAAAACCAAAGAAGCAGCTACTTTGTACATGGAGACTCTGGGTAAAGATTTACTACGTGGAGACGAAAGCTTCGACGAGGACGATTTGGCCCTGGAAAGCTACTTCGAGTTACCTATCATCGAACCTGCGAAACCgagaaaagaaataaaagagCCACTAAAGAAACCAAAACCGGCcaattcggtgaaaaaaaatacgtcgaaattgattaaaaaactaGCCGATAAAAAAGCCACGTCGAAAATACATAAGCCGGTTAAGAAAGTAATCAGAAAAGATAGAGCTCAGATTGATAAATTGAATGACGAGTTGAAAAAGATCGTCGAAGATAAACCtctgaaagaaaaattggaaaatattactAAATCGATCGATATCGATAAGGAATTAGAAACCATCGATCAAACTTTGAACGATGCTAAAGCTAGAGCAGTAAACGAATCTACAAAATTATCCAACGAATGTTCTGGAACCAACCGAAAATCATCGACGAATAAACTgccgaataagaaaaaaaataattctgttGGAATAAATCACGATGTACTACCACTGAGAaaagaaaacgagaaaattgaTGTTTGTAAGGAGTACGATggtattgaaaatattgatattCCCGAATTCACGATGAATACTTCTGACGAgcttgaaaatatcgaaaaaattttgctggaagaaaatatcgagaaaccaaaaattaaaaccgaTGTGCCGAAAAAAGATAGTATTATAGTAGAAAACATTGAGAATATTGTTTTACCAGAGGAAAATGAGATTgtcgaagaaaaaatcaaaagttcaatCAAACAGAAGGAAAAAACTGAAGATACTCAGCAAAAGGAAACGATTATAAACTCTACTACGAAAAattGTTCGAAGAAATCGGCTGAGAAATTGCGAAAATCAGAAACACTAATCACCATTAAgaaaaattgTTCGAAGAAATCTGTCGTCGAGAAAATCAAGAAGCCTGGAGTTTCTAAATCACTTATGAAAAATTGTATCGAAAAACCAGTTATTAGAGTCGAAAGAACAGAAGTGCCCAGTTCTACGACTAAaaATTGCTTGAAAAAACCAGCTGAGAGAATAGAAAAACCAGAAGTTCCATTGAAAAAACcaccattgaaaattgataagctCGAGGATTCAAATCTTTCCGTCAAAAACTGTTTGAAAAAACCtgcagaaaaaatggaaaaaccaagtTCAGCTTCCAAAGAAATCATCTGCATGGATCTCGAAGTAGACGAAGAAAAATATCAGACCGAAGTTGAAGAAAATCTACCTCATAAAATTCCTAGTAAATTGAAATCTATCGACGAACCCAAGCCCGATAGTAATTCTACGATCGAAGAACGtaaacatgagaaaaaaatagtcgTGGAACCGGTTTGTAGAACACCAATCGCTAAGAAGAATCTTAATCGTAAAAAACCATCGGTCAAGATAATTCGAGCCAAACCGAGCAAACTGGACGTAGATGAAACAGCTGATACTTCGAAAACGACGCACGTAGAATCAGCAACTGGAAGTAAACCAAACGAAGATCTCGTTATCCATAAAATAGACGACGTTGTAACGAAACCAATGCCTAAGTTAGTTTTCGCCAATGGTAAAGCAACGACCACGGAAGAATGTTTAGATCAACCGATTATCCAAACGATTGCTTCGTCTAGCAACAAAATGTTCTGTTTGGAAAGCAAGAAGATTATTTTTAAGAAGAATAAGACTCCGGTGGTGGCCGATGATAGAGAAGAAAATATTTCTCGTAGAACTGAAGCGTTCTCAGCCGATAATGAGAACAGCGTTTATGCTTTTGAGCCCGATTTACCTACTACTAGTCCTCCATTTAGAAGACTGAAACCAGTTACGCCTCCGAAAAACCTCATTAGTGGTAATTCGATAGCTGTACAGGTAAATTTCGAAAGCAACACTAAAATAGAATGTTCGAGTTCATCGGAGACTCAAGTATCTTCTACTACTGATTGCGATGATCGAGTATTCTACATACCCATACAAACATCTGATACGAATAGTACTCTGGGTGTAGCTGTCAAGCTAGACACAGACGGAGCCAACCAGAAGATCATCATGAGCGCTACATTGGTTACCAAATCACCATCATCTTTCACTACTTCTACCGCTACTACCGTCGCATccaagtCCGTTATCTCTGAACCGAGCACTCCGGAGGTAGCCGAACAACCGGAATTGCCAAAGAAACCGCCACCGAAAGAAACCTCGGATAAAGTAGTAGCCACCGCTGACTCGCAGTCTTCCTCTCAAACTCCTACGGATTCTCCTTCTTCCACTGTTGTTTCtccaaaatgtaataaaaaagtTAGCTCTACTACTAAACCCAGTCAATCGGTGAAGATTGTGAAAATCAACAAAGTCAAGAAGCCATTGCCTCCTAAACCTAAACCGAAACCAGTTCGAGCTAAAAGcaaTAAAAGTAAACCAGCAGAAAATACTAAACCGGTTCAGAGTACTTCTTCGAGTGAAATTCTAGAAGCTCCAACCTTCTATCCTTCTGAAACTGAATTCAACGATCCGTTAAAATACATCGATACCATTAAATCAGTTGCTGAGAAATTTGGACTTTGTAGAATTGTTCCTCCGTCTACCTTCAGAcccgAATGTAAAGTTGCTGATGAAATGAGGTTTACTGCGTATAATCAATATGTACATAAAATGTTGCATCGATGGGGGCCAAATGTCAAAGAAATGATGGCTATTAAAAAATTCCTCGCTACCCAGAATATCCAGCTTACTCAAGTGCCTGTGatTGGTGGTATGGAGGTAGATTTGCCTCGTTTGTACCAGATGGTTCAGCAATGTGGTGGCCTAAAAGCAGTTATTGAAAAAGAAAGGTGGCATCAGGTGGCCGATGTAATGAAAATACCGAAACTAGCTCAAGATCGAATTACTAAATTGGACGATATTTATTGCAAATATTTACTACCTTATGATATTTTATCTCatgACGAAAGAGAGAAATTATTCGAAGAAGTAGAAAAAGACTGGAATGCTCATTTGAAGAATCCCGATGAcgacgatgaaatttttgacgACGTCGACGAATGTATCGTTAAAGGTCGCACGATGCCATTGAGTTGTTTCTATCGTATAGCTCGTAATACGATGATGATGTGTTTCGGTAGTATCGAAGGTCAGAAAGGACCTTCGACCGAAACGATCGAAACTGAGTTTTGGAACCATGTATCTCAACGTAAATCTCACATCTGCGTGCATTCTGGTTCCATTGAAACTGGCGTGCATGGATATGGATTTTCGGTGGCGAAAAACAGCACGTTTCGAAAACATCCGTGGAATTTGAAAGTGCTAACGAATAATTCGGCTTCAATTTTAAGATCTCTTGGTCCAATAATGGgcGTTACTGTTCCTACGTTACATGTTGGTATGCTTTATTCTGCCTGTTGTTGGTATCGTGATCCTCATGGACTACCTTGGGTCGAATATTTGCACACAGGAGCAAATAAAAtttggtatggAATACCAGACGAATATAGTGAGCAATTCAGCAAAGCGATGCGTGTCTTAGTTCCAAGGTACTGTCGCGATAAAAGACTTTGGCCTCCATCAGATACGGTGATGATACCACCTCCATTATTGGCAACTCAGAATGTACCTTTATCCAGAGTTGTTCAACAACCTGGACAATTCATCGTTGTGTTTCCTAAAGCTTTCACTTCTTGTATATCGACTGGTTATATGGTCTCAGAAAGTGTATACTTTGCTCATACTTCCTGGCTGAATTCTGCTAAACAGATATTTTCGgATATGCAAGAAAGTTGCGAACCATCAGTATTTTCTTTAGAGCAATTGCTTATTAGTGTAGCTACAGACGTTCGAGCTAGTCTTGTAATCCTCAGCAAAATCTTACCATTATTGATCGAACTGCGAGATGAAGAAATAGTTTTGAGAAATCAGCTCGTAAAATTAGGCTTGAACACTTCACAGAAAATGCAAATAAACAAGAAACGTAAACTTAAAGCGTCCTTCAATGACGAAGATAATTACGAATGTGAAATTTGTCGAGCTAATCTTTTTGTATCATTGGTGATTAATTCCCACGAAGAAACTAACTATTGTTTAAAACACGCCGTTAATCTTTTGCAAAAGAAACCAGCCCAAGTAAAATACTGTAAATTAATGTGTGCTTATACCGAAGATGAACTGgaagaaatcattaaaaaagttcaagaaaaaatcgaaacaaaaagTCGGAAACCGAACTCGAAGCAGAATTCGAACTGA
Protein Sequence
MKRRSSATGLNERCTSPIIKRTKVHAQRKFAQGSNNYVTTPTKLPKPNDPSTQPFSPEINRVADNDGRELNNFSNLPTIDDFLTFLCYRETDVLPQRLNYLNTPQFESIPAKKKPLKSNSTSSSSLPSSKSSIDHDKASDKVNSNFKSKKKVPEFPLRSKEIKCKPIISKTSRSLAMKHNQRLRKTVQTKFTENKLPNFKAKNTLNKFPAPKNNNDVKVNNVRNHNVSRTNAAKETPKTVDLEIKRVTRRNSNLNALAEKPEVVKTPAKRSQSKSSTSVTKELSLAVDNAHIPAKRLSAKPLRVSVAKVTTPVISSLSPVKTRSTRSATARLESNLKTPSTSSRPTRKTKEAATLYMETLGKDLLRGDESFDEDDLALESYFELPIIEPAKPRKEIKEPLKKPKPANSVKKNTSKLIKKLADKKATSKIHKPVKKVIRKDRAQIDKLNDELKKIVEDKPLKEKLENITKSIDIDKELETIDQTLNDAKARAVNESTKLSNECSGTNRKSSTNKLPNKKKNNSVGINHDVLPLRKENEKIDVCKEYDGIENIDIPEFTMNTSDELENIEKILLEENIEKPKIKTDVPKKDSIIVENIENIVLPEENEIVEEKIKSSIKQKEKTEDTQQKETIINSTTKNCSKKSAEKLRKSETLITIKKNCSKKSVVEKIKKPGVSKSLMKNCIEKPVIRVERTEVPSSTTKNCLKKPAERIEKPEVPLKKPPLKIDKLEDSNLSVKNCLKKPAEKMEKPSSASKEIICMDLEVDEEKYQTEVEENLPHKIPSKLKSIDEPKPDSNSTIEERKHEKKIVVEPVCRTPIAKKNLNRKKPSVKIIRAKPSKLDVDETADTSKTTHVESATGSKPNEDLVIHKIDDVVTKPMPKLVFANGKATTTEECLDQPIIQTIASSSNKMFCLESKKIIFKKNKTPVVADDREENISRRTEAFSADNENSVYAFEPDLPTTSPPFRRLKPVTPPKNLISGNSIAVQVNFESNTKIECSSSSETQVSSTTDCDDRVFYIPIQTSDTNSTLGVAVKLDTDGANQKIIMSATLVTKSPSSFTTSTATTVASKSVISEPSTPEVAEQPELPKKPPPKETSDKVVATADSQSSSQTPTDSPSSTVVSPKCNKKVSSTTKPSQSVKIVKINKVKKPLPPKPKPKPVRAKSNKSKPAENTKPVQSTSSSEILEAPTFYPSETEFNDPLKYIDTIKSVAEKFGLCRIVPPSTFRPECKVADEMRFTAYNQYVHKMLHRWGPNVKEMMAIKKFLATQNIQLTQVPVIGGMEVDLPRLYQMVQQCGGLKAVIEKERWHQVADVMKIPKLAQDRITKLDDIYCKYLLPYDILSHDEREKLFEEVEKDWNAHLKNPDDDDEIFDDVDECIVKGRTMPLSCFYRIARNTMMMCFGSIEGQKGPSTETIETEFWNHVSQRKSHICVHSGSIETGVHGYGFSVAKNSTFRKHPWNLKVLTNNSASILRSLGPIMGVTVPTLHVGMLYSACCWYRDPHGLPWVEYLHTGANKIWYGIPDEYSEQFSKAMRVLVPRYCRDKRLWPPSDTVMIPPPLLATQNVPLSRVVQQPGQFIVVFPKAFTSCISTGYMVSESVYFAHTSWLNSAKQIFSDMQESCEPSVFSLEQLLISVATDVRASLVILSKILPLLIELRDEEIVLRNQLVKLGLNTSQKMQINKKRKLKASFNDEDNYECEICRANLFVSLVINSHEETNYCLKHAVNLLQKKPAQVKYCKLMCAYTEDELEEIIKKVQEKIETKSRKPNSKQNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-