Pvib007974.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- Arid5a
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000088.1:195659-221684[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 7.3e+03 -2.1 0.0 73 88 19 34 10 35 0.80 2 2 6.7e-24 2.4e-20 73.2 0.1 2 89 143 228 142 228 0.95
Sequence Information
- Coding Sequence
- ATGATTGACCGTTTTACTCGCTGGCCAGAAGCTATACCTGTACCAGACATGATGGCCGAAACAGTAGCGAAagcattttatgaaaactggaTAGCCAGATTCGGAGTCCCTGAAAAAATAACGACAGACCAAGGAAGACAATTCGAGTCAAATCTTTTCAAAGCATTAGCTAAGCTACTAGGCATCAAAAAATGCCGAACTACCGCGTACCATCCGATTGCAAACGGAAAAATTGAGAGATGGCACCGCGCGCTCAAGGCCTCATTAATGTGTCACTTGACTAATAATTGGGTGGATAAACTACCGTCTGTATTACTAGGGTTACGGAATTGCGTCATCACTGATTTAAATGCCGCACCTAGCAACCTTCAGACTGGTATCAAACGATTCGATcctaaaaaattgcccaaaccACCGTCAGTGGCTCAACAAgcatttactcaaaatttgtaCGCCTTTATGAAAGCCCGCCTCACACCAATCGGCAGATTACCATTGATTGGTAATAAAGAAATAAATCTGTACGAATTTTACaataaagtaaaattattaGGAAGTTACGCATCGGTAACGAATAATAAACTGTGGAAATACGTTTTCGAAGAACTAGGCGGTGACCGTGGTGATCCTTCGATGGCTACATTGATgcgaaaatattacgaaaaatttttattaCCTTACGAGCAACATATGTTGCAACAATTGAAGCATTCTACGGCCAATCAATCGACCAGCAGCGGTAGTGGAGTTATCAAATCTTGTTTACCCCCTACGCTGAACGCCGATTATCGATACCAAGCGGACAGAAGAAAAGTGGTCACCACAATCAGGCCGATTCCAGGCAGCGTTAGACTCGCGGATAGCAAATCAGTAACAGTGACATCGTCAGCAGCTCAGATGGTGAAACCAGCCTCGCTACAACCGGTGACTGGCGGTAAAGAAAACATTCCTTTATCTAAGAAACTATCCTCCGGTACGAATTCAGACGGTACCGAAGTAGTAATTGATCTCTGTGCCGAAGAGGAAAGCTCGTCGAGGGCAACGCCTCCTCGAAAAAGCAGCTCGACTGAACCCGAAGTGATAGATTTATGCGAAGAGCCCCCCATCAGACGATCCGTTCCGTCAATAGCTGCCACATTACTGCCCAGGAAACGTAAATTGGATATATTGAGAGAAGGAGGCCTCGAGGTGACTCCGGTAGCCAGCGCCGGTGGCTCCAGTTCCATCACCATATCCCGTCGGCTTCCTCCAGCCTCGGTGGCCATATCGGCCATCAAGAGCGGCGAAACATCGCTCGAAGTTATCGATCCTAAGAAAATCCAGAAACCTCGACCGAGTCGAGCACCCAGCCAAGTACTCGATCTCAGGATGATGAGGAACGCTTCCGGCACCAGCGACGACGAAGACTCGGTCGTCAAGAAATTTAGTCCCAATTTAGGCCCCAATATCGAAATATCGTTGGTAGCCAACGATTCGTCGTCGGCACCCAGAAACGGCGCGAGCGGTAATAGTCTGCGGAGAGATGATAAAAAACGTAAATCGATTCCGCTTCCGATTCCAGCTCTTCGTAAAATCTCAACCGGAGAATTATCGGTGAAAAATCTAGCCAATAACGACGATATGTACAATCCAAAGGTTACGTTGACCGGTCGACGAACGTCCTCCGACGTAACGCTCACAAAAGCTCCTAAATCTTCCATTCCAGCCGCTGCCGCTACCGGTGCCGGTGCACAGACCAAGGATAGGCAAACACCATCGCCGTTAGTCCAGCACGTCAACCCATCTTTATATTTGGCCGCGTTTTATAATTCCATATTCCCCGAATCTGGCTCCGATTCGTTTATATCCGCTCACGAAGGAGCCAACGCTAATAATCCATATCAAATACAGCTCACTCAGCAGCAGATTAATTACGTCAAAGGTGCTTTTATGCATCAACCCGGTCAAGAAATCGATATCGATAACGCTACTGACacgtttgctcaaaaatttaccaTTGGCAGTGTTACCAGCAGGTTGCCATGTTTCTGGATCTTGGTAATGCCTGCGACAGCTCCGGCCCCAGGTCTAAGGTacgaattttccaagtttcctTGGCAAGTTGAATTGCCCGATGACGAAGTGGCGTTCGACGTTCCTCCAGCGACGACGCTGAATGGTTCGAGTCGTCGTATTGCATTTTACCGGTACGGTTTCGCGTTTCGACGCGACATAAATGCCTCTTCTTGTTGTATGTCGCATAGCTGTACCGTACCGTGGCTACGTACCCGGTTAAATATCAACAGCTATCTCGGTGACTGCTCTCGGCATCCGTTTTCGCCAGTTGCGATAAAAGTATTAAATGGCCACATTTGTTATCGGTTTAAAGAAATCCAACGGTTTTGCCATCGTGTCGATGGCCATTCCGGTAATCAACTTCGCGAAAAACCATTTCCTCCGTTGTGCCGGTTCcaaaagaaaattcatttcggtCTCCTGCCGCCGCTGTCATCGTTGCTGAGATTGCCTGGCTCCGGTGATCAGATCTTACTGTAG
- Protein Sequence
- MIDRFTRWPEAIPVPDMMAETVAKAFYENWIARFGVPEKITTDQGRQFESNLFKALAKLLGIKKCRTTAYHPIANGKIERWHRALKASLMCHLTNNWVDKLPSVLLGLRNCVITDLNAAPSNLQTGIKRFDPKKLPKPPSVAQQAFTQNLYAFMKARLTPIGRLPLIGNKEINLYEFYNKVKLLGSYASVTNNKLWKYVFEELGGDRGDPSMATLMRKYYEKFLLPYEQHMLQQLKHSTANQSTSSGSGVIKSCLPPTLNADYRYQADRRKVVTTIRPIPGSVRLADSKSVTVTSSAAQMVKPASLQPVTGGKENIPLSKKLSSGTNSDGTEVVIDLCAEEESSSRATPPRKSSSTEPEVIDLCEEPPIRRSVPSIAATLLPRKRKLDILREGGLEVTPVASAGGSSSITISRRLPPASVAISAIKSGETSLEVIDPKKIQKPRPSRAPSQVLDLRMMRNASGTSDDEDSVVKKFSPNLGPNIEISLVANDSSSAPRNGASGNSLRRDDKKRKSIPLPIPALRKISTGELSVKNLANNDDMYNPKVTLTGRRTSSDVTLTKAPKSSIPAAAATGAGAQTKDRQTPSPLVQHVNPSLYLAAFYNSIFPESGSDSFISAHEGANANNPYQIQLTQQQINYVKGAFMHQPGQEIDIDNATDTFAQKFTIGSVTSRLPCFWILVMPATAPAPGLRYEFSKFPWQVELPDDEVAFDVPPATTLNGSSRRIAFYRYGFAFRRDINASSCCMSHSCTVPWLRTRLNINSYLGDCSRHPFSPVAIKVLNGHICYRFKEIQRFCHRVDGHSGNQLREKPFPPLCRFQKKIHFGLLPPLSSLLRLPGSGDQILL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -