Basic Information

Insect: Pseudococcus longispinus
Gene Symbol: zfh1
Assembly: GCA_900064475.1
Location: FIZU01049896.1:52040-64600[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.6e-05 0.0015 19.2 1.0 2 23 28 49 28 49 0.97

2 7 3.1e-06 0.0003 21.5 7.5 1 23 58 80 58 80 0.99

3 7 2.2e-05 0.0021 18.8 1.5 1 21 86 106 86 107 0.95

4 7 0.018 1.7 9.6 6.3 1 21 357 377 357 378 0.92

5 7 2e-05 0.0019 18.9 2.2 1 23 694 716 694 716 0.91

6 7 0.00055 0.052 14.4 9.3 1 23 722 744 722 744 0.98

7 7 0.0016 0.15 13.0 4.4 1 21 750 770 750 771 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.6e-05	0.0015	19.2	1.0	2	23	28	49	28	49	0.97
2	7	3.1e-06	0.0003	21.5	7.5	1	23	58	80	58	80	0.99
3	7	2.2e-05	0.0021	18.8	1.5	1	21	86	106	86	107	0.95
4	7	0.018	1.7	9.6	6.3	1	21	357	377	357	378	0.92
5	7	2e-05	0.0019	18.9	2.2	1	23	694	716	694	716	0.91
6	7	0.00055	0.052	14.4	9.3	1	23	722	744	722	744	0.98
7	7	0.0016	0.15	13.0	4.4	1	21	750	770	750	771	0.96

Sequence Information

Coding Sequence: ATGGATTTTTATAACGCCGCATGTGGTAATTTCGAAGTATTCGGAGTCGCGGCTCGATTGATGGGAGACGACACCAGCAGGtCGTGTAAAGTATGCAACAAAACTTTCGCCAATGTTTATAGACTTCAGCGACACATGATCAGTCATGACGAGAGCGCCGTTTTACGTAAATTCAAATGTCCTCATTGTGAAAAAGCCTTCAAATTTAAGCATCATCTAAAAGAACACATTCGTATCCACAGCGGCGAGAAACCATTCGAATGCAACAACTGCGGTAAACGATTCTCGCATTCTGGATCTTATTCGAGTCACATGACGTCGAAAAAATGCCtaataatgaatttaaaagtcaacaatCGAAATAGAAACAACGACACCAAGGTATCAAACGGACCTCAACAGACCGCCGCCAATTACCCGGCCAGTAATCGTATCAGTCCTAGCAAGCATCAAAAATCCATAACTAATTTAACCAACAACAATCACAACAACAATAACAATAacaacaataataataaaaataccgCTAACAATAACAACAATATCTTATTCGCGCCGATATTACCAAAGTACAACGAAAGTCACGGTATTCTGCTACCCAATTATGCCAATTCGGCAGTCACCAACAACATACATTCGTTCTATTTGCACTCGAGTTTGGCAATGAATCAGCATAATTTGCCGTACGCGTTTCCGCCTTCGTTGAATCACCTATTGGAGCAATTCTCGATGGCACCATTGAACGCAAATTACCAAGAGACCAAAGATAGAGACGACACCAATGGCGATGGTATTCTGCAAAACGGTGACTTACTGGGCAGcattaaaaaagaaacgaaatccGAAGAAGAAGACGAAGACGTATCGATGAAATCGCCCCAATCGATGGAAGAAAAAAGACCCGATTTGGAAGCGGTCAAACGTATCCTGGAAACGGTCAACGTCAATGTTACCAAACACCTGTTTGGCACAAATGTGCCGAAATTATCGTCGACATCGTGCAGTTCTGGATGCCCGAGCGTTTCCAGCGAAGTACCATCGCCCGCTGTCGACGAACCGGCCAACGAACATTGTTGTAAATTCTGCTCCAAGACTTTTACCTCTTACGGTGAGCTGCAGCAGCATGAGAAGCATTCGTGCGGCAGAGACGAAAAGAAACCCGAAGGATTGGCCGCCAAGCTGGTTGATGTGGTGTCTAATCATCGAGAAGAAACCAACGGTACGTCGAATTGCAATAGCGACAGTGAAGAAGATACTCCAGGCTGTGGAAAAGAATACATGATGACCGAAGACGAGGATTCAGAAACAATGGACAGTCGTAAAGTACGCGTACGTTCGCAAATCTCGGAAGAGCACCTCATCATCCTGAAACAATACTACGCCCTAAATCCGCGTCCGAAACGCGAAGAACTGGaaaaaatctcgcaaaaaGTTGGCTTCCCTGTCCGCGTGGTTCAAGTCTGGTTCCAAAACAACCGAGCCCGAGATCGCCGAGAAGGAAAACTGGTGTATTCGCAGTACACGCCGACATATCCGGCGTTCGGTTTAAATCCTAATAGCGAATTTTACCAGTCACCTACTTCGTCACCGCAGATCGCCACGGATCAGCCTTTAGACTTATCGACGAAGAAATCGTTCAACTCTAGTCCAATGACTTCGCCTTATCGGTACGATTCGGACGAATGCGGTGCCGTGAATTTATCGAGAAAGTCGCCTTCTACTCATCAAAATGTGCATTATGGCGAACGCAATCAGACACCTCCGTTGGTCGACAGCAAACTGTCTAGAGGGTTACCGCAGAGAAATCTTACACCGAATGGTACTCCGGCAGGGTTTTTTAGTATGGATCGTATTATCTATGTTAATTCGTCGCAGTCGCCGGTTACGTCCAGTAGTCCTAATTACAACGGTAGTTGTAGCCCGAATTCGTCTGATTCGTGGAAACAGGATTACCTGAATTCCAACGAAAGTCACGATCTGAAATATGGCGAAGATTCGATCGACGGTCAAACCGTCGTGACGCCAACCAAGAAAGCAAAGCTAAACAGTAACATCGTCGACTCAGAAATAGAGGGTCAGTTCTCGTGTGAATTTTGTGacaaaacttttacaaaacaaAGCTCTTTAGCAAGACATAATTATGAGCATTCAGGTCAACGTCCTCACAAATGTGAAATCTGTTCGAAAGCTTTCAAGCACAAACATCACTTAGTGGAGCATAAACGTTTGCACAGCGGCGAGAAGCCATTTCAATGTACAAAGTGTCTGAAACGATTTTCACATTCGGGATCCTACAGTCAACATATGAATCACAGATTTTCTTACTGCAAGCCATACAGAGAATAA
Protein Sequence: MDFYNAACGNFEVFGVAARLMGDDTSRSCKVCNKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHIRIHSGEKPFECNNCGKRFSHSGSYSSHMTSKKCLIMNLKVNNRNRNNDTKVSNGPQQTAANYPASNRISPSKHQKSITNLTNNNHNNNNNNNNNNKNTANNNNNILFAPILPKYNESHGILLPNYANSAVTNNIHSFYLHSSLAMNQHNLPYAFPPSLNHLLEQFSMAPLNANYQETKDRDDTNGDGILQNGDLLGSIKKETKSEEEDEDVSMKSPQSMEEKRPDLEAVKRILETVNVNVTKHLFGTNVPKLSSTSCSSGCPSVSSEVPSPAVDEPANEHCCKFCSKTFTSYGELQQHEKHSCGRDEKKPEGLAAKLVDVVSNHREETNGTSNCNSDSEEDTPGCGKEYMMTEDEDSETMDSRKVRVRSQISEEHLIILKQYYALNPRPKREELEKISQKVGFPVRVVQVWFQNNRARDRREGKLVYSQYTPTYPAFGLNPNSEFYQSPTSSPQIATDQPLDLSTKKSFNSSPMTSPYRYDSDECGAVNLSRKSPSTHQNVHYGERNQTPPLVDSKLSRGLPQRNLTPNGTPAGFFSMDRIIYVNSSQSPVTSSSPNYNGSCSPNSSDSWKQDYLNSNESHDLKYGEDSIDGQTVVTPTKKAKLNSNIVDSEIEGQFSCEFCDKTFTKQSSLARHNYEHSGQRPHKCEICSKAFKHKHHLVEHKRLHSGEKPFQCTKCLKRFSHSGSYSQHMNHRFSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01490845;
90% Identity: iTF_01262335;
80% Identity: iTF_01262335;