Basic Information

Insect: Pseudococcus longispinus
Gene Symbol: Hivep1
Assembly: GCA_900064475.1
Location: FIZU01044823.1:3322-22779[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00024 0.023 15.5 1.2 2 23 240 261 239 261 0.96

2 8 0.017 1.6 9.7 2.9 1 21 267 287 267 292 0.88

3 8 0.0014 0.13 13.1 0.2 2 21 643 662 642 663 0.94

4 8 1.1e-05 0.0011 19.7 2.6 1 23 1265 1287 1265 1287 0.99

5 8 5.5e-05 0.0052 17.5 4.0 1 23 1293 1317 1293 1317 0.92

6 8 1.4e-05 0.0014 19.4 0.6 2 23 1586 1607 1585 1607 0.97

7 8 0.0015 0.15 13.0 0.8 1 20 1613 1632 1613 1637 0.91

8 8 0.001 0.096 13.6 2.4 1 23 1659 1683 1659 1683 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00024	0.023	15.5	1.2	2	23	240	261	239	261	0.96
2	8	0.017	1.6	9.7	2.9	1	21	267	287	267	292	0.88
3	8	0.0014	0.13	13.1	0.2	2	21	643	662	642	663	0.94
4	8	1.1e-05	0.0011	19.7	2.6	1	23	1265	1287	1265	1287	0.99
5	8	5.5e-05	0.0052	17.5	4.0	1	23	1293	1317	1293	1317	0.92
6	8	1.4e-05	0.0014	19.4	0.6	2	23	1586	1607	1585	1607	0.97
7	8	0.0015	0.15	13.0	0.8	1	20	1613	1632	1613	1637	0.91
8	8	0.001	0.096	13.6	2.4	1	23	1659	1683	1659	1683	0.93

Sequence Information

Coding Sequence: ATGTACTTAGTTGTAGGTGTATCCGAGTCGAGCACATTTATGACGAGGTTGATATCTGTTACAggaattaaaatcgaaaacgagccggaaaacgatgaaaatgaacCGAACGACGGTAAATCGGAAAATACCAGAATTGATGCTCAAAAgacaaacaatgaaaattGCACGCTGCTGGACCAAGCATCGACGAACGCTCCGGAAAATATATCGAATTCGTTGGCGAACGCGACCACCAACGGCAGCAACAAgtatttgcataaaaaattcaaaaaaatggtcgcCTTATTGTCGGACGACTGCACGTCACCTGCGACGGGGGCGGCCGCCGCAGTCGCAGCCACCGTCGATCAACCCAATCGAGTCGTTTCATCGGCAATGGTAAGAGAATCAACACCCTGGGCCATAACCGCGACCACCACATCATCGACCATCAATACCTCCATCACCAGCACGCCGGCTATCGAAAATCATCGTCAACTGCAGCAACACCACCCATCATCGATCAATGCAACAGTAACGACAACAATGCAATCTAGtcttccaaaaatggcaacgTCAGCAACTCCACCGACGCCGCCACGTATCGATGGTAAATTGACGACGGTGCCGGAGTCGGCGGGGAATCATTTGGTCGTGAATCGAGAGTGCAATTCGACCAGCCCTTATAAATCGAACTCAGAAGACGACGGGGTGGCGACGGTCCAAGCCAAATGCGTGTGCCCGTATTGCGATCTCGTGTGCAGTAAACCTAGCGTACTAGAGAAGCATTTACGAGCACATACAAACGAACGGCCGTATCCTTGTCTTCCTTGCGGATTTTCGTTCAAGACGCGCAGCAATCTTTTGAAGCATTGCCGCACCTCTAGATCGCATTCGTTAAAACTGGAAGAAGCTGGAGTCGAAAACAATACGTCGATGGTGTCTCGAGGAGGTCTGCAATTGGACGAAGATTGCGACGAGACGGAAGACGACGCGATGGTTTCGACGACCTCGTCGACCACTTCGTTGGCTTCGATAAAAGATAGCAGCGAATCTAGCAGCAACGACGAGAACAAGGCGTTCTCGACCGAGAACGTACCACGAACCGGTATCTACAAGCCTAAGTTCCATAAAGCCATTTACACTCAGAACAACGCGGTGGCACCTTGTGCGACGGCGACCATCGCTTCTAAAAGCATCTCAGGTACGGTCGAACCTTCGACAATGAACAAGCTCGGTTTACAACTGAAAATACCAGCGTCCGGCAACGCAGCTCATAACTCATCGGCTTCGTCGACGCCATCGACACCGTCGCCATTTACCAGCGGCTCGTCGCCCAGTCCGGAATTCCTCCATAGGCACATTAGCAAACTAATCAGCGAGAATCAGGCCATCGTCGAGACAACCGATCCGTTCTGGTCGAAGAAGTTTTACCAAAGGAGTAAAGAAGGATCGCCATCCAGTCCTTTATCCAATTCGTCTTCCTCTAGTATAGATTCATCCTTCAAGAAGATACCAGCCGGAGTGGTGATCGTTAAGCCATCGACGGAGCTAAATATCGAAGATAAGCTACCGGTTGAGTCGAAATTAGCCCATGCTTTGCTTCAACCAAGGGTCGTCAAGGCAGCTACGGCCATTGTACCAGGTGCAAGTGAAACTTTCGCGATATCTTCGGCATCCTCGACAGTTTCGGTGGTCGTCGAAGACACCCAACCGTTGAATTTATCCATTTGCAAAGATACCAGACCGAAAAGTTACCTAGACGAGGAGGATGATAAGACTGCGACGCAAGCCGAATACGGTAGATTGATGGCTGCCAACGAACCAGCTACCAGATTCGTACCCAATGGTAGATTATGCTCGGCAGGCGAAGTGTACCCGAAGGATACTCATCACCATCATCAGGGCTTCGTTAAAGCCACGACTTCGGCCACGTTGCCGGACACGTGTTCACTATGCGACGAAACTTTCGATAACTACGATAAGCTGAAGACTCATATATTGTATCAATGCAAAGGCAACAAGAATCATAGTTTAAGTAGCACCGCTAGTATTAGTAATCAGCTGGGCAGCGTTAACCATAAATCTACTGGCTCCGGCAACGACGCCAGAGTATTCCTAAGAGTAGGGCCATCGGATCCATCGTCGATACCGCTCCATCAGCTGGCCAAAGCCAACGCGAATCAATCGCCCGGCCCGCGATTAGGTAACACGCCGTTGATAGGCGGGTACAAGAAATTATCGGTCATTACGACAACTGGTGGACCAGGTCCTTCGTTAGAGAAGTGCACGACGACCAGTACGAAAAACAACCAGCACCACGTATTGATCGAGCAGCATAAAACCGTGACTAGTTTGAAATCGCTGGAGGAGTTATCGAACGCGCCGATGAAAGGAGCCAATCATTTCGTATACAATGCGGCCCTAATGGACGACGCCGTCGATAAAAGCTCGTTAAAAGTAGCCACAGCAGAATGCAAAGAAGAGGCCAAAAACTCGATCATCGTCTCGAAAACAGCCTGCATTGCCGAAGACACAAAACTGATCTCGATTAAGTGCGCCTCGATGGTGGCAGCCAAGCCGAAGGACGCTTCCGGTGTGTTCAAATCTAGCTCTGGCCTAGCCGTCGATCTTGCCACTTTAAGCAAAACTACCTCATCGGCCACCGTTCCGAAAATCAGCCAGTTTGTTATACCTGTTGTTCAGGGCGTACCTAATCTTGCCACCATACAAAGTGTCCAAGCCGCTGCGCTTTTGGCAGCTACTACCAATTCGGATATTCACTCGATGTCACCGATTTCTGCTGCCGCTGCCGGATACAAGACGCCGACAACTCCGACGGCAGCATTACCTAAGGCTAAATCCACCCATGTTAACGGCGGAGTGGTGACTATATTGCATGGAGGCAAAGTGATCCCATATGTGCCCGGGATGCCCGGTCCCCAGTCGGCTGCTGCAGCGTTTTTACAAGTCGATGGGTATGAGAAAAAGAGCTCCGAAGCGGTTAAAAGGAAGTATGATGATGGTGGACCGATTAATGGGATGATTAAGCATCCGAATCATCAAAGGATAGAAGAGCTGCCCAGTCCTAGTACTCCTcagggtgccaaaattttccacggcGTTAAAATTAAAGAAGAGATTGTCTCTAGTatTTACCTAGACCAAGAGAAAGACACCAGCGGAGCGAAATTCGCTCGACCTTGTTCGTTACCATTGAAACCGGGCACATTCGTACCGAAAAAGCTGCAACCCGGCACGTCGTCCGTACTACCTCTTATCAGTCCGGAAACTCCTCGTCCGAATAAATCCTACGGTCAGCTGTACATCGGCGGAAACGCTTACACTTATCTCGGCCTGAAATGCTCCACTCGCAGTACATTCTGTACCCTTCATAAATCGCAACCGACTTACGTACCTCTCAGTCCCGAACATAATAAAGTGTCTATGTACTCGAATTGGAAAATACGATCGGATGTCGATCCTTATCTACGCGGCGTTCCTCCTACGAAAGCGATGTCTTGTTATGATTCACGTCAGCGATACTCGTCGTACACAGTCGTCCATACAAAGATGAAAGATGCCGTAACTCATTCGTCGTATTGGTTCAACAGATCGAAACCCCACGCAGATCATGATACCGCCATCAAGCAATGTATCGATAACGAAAATAAAGACAATATACAAATGCAATCACAGAGTGATCTACATGCAAGGAACGAAGATGGTTCGAAATGTAATAGATTCCTCGTCGGGGGTATCGAGTCGACGGACGATTATACTTATATTAGAGGACAAGGGCGAGGAAAATACGTTTGTTTGAAATGCGGTATTCGGTGCAAAAAGCCATCCATGTTGAAGAAACACATAAGAACACATACGGACGTACGTCCTTATATTTGTAAACATTGCGTATTCAGGTTTAAAACTAAAGGTAATTTGACCAAGCATATGAAATCAAAGGCCCATTATAAGAAGTGTATGGAGCTGGGAATCGTACCGGTGCCAACGGTGGTCGATGATTCGTACGTGGACGAGGAAATACTTTCGAAACAGGTGACCGAGGATCCAAAATGCCAACTAGAAAGAGAAGTGGCTCGATCGTTGCTATCTCTGTCGAAAATGTCCCACCAGACGGTCTCCGAACAATACGCCAACGCCGGATTAGTACCACTGAACGCCCGACCAAACACATACCCTTATAATTTCTCAGCTAATCCTCATTTGTCGTCTAAACCTCACACGCCAACTTTAACACTAATCAGTGAGCAAAAAGAACAAGAAAAGgTATCTAAAAACACAGGCTTAGCTCGCGAACTCCAACCAATAGTGACCTCAAACGCTGTAATCAAGCCGAAAAGCGAATCGTCACATACCAACGAAAGATATTACTTCGGATCAGCAGGCACCGACAAAGAACACGTACCAATGGAAACGAACGAACCTCCTGTGCCTGAACTCGTCGTCAAAGAAGCATCACCCATGATCACCGGTAAAAATACGTTCGTTGATCGTTGCAGTGGCGGAGGTGGAGGTGGCGGTATGAGTGCCAAGATCGAGACACTGGAACGAGGCAATGATATCGAATCAAAAGAGAATCTGGCTCTGACACCGACGCCCGATGGAGAAAAAGCAGAAAGTTCTACTTCAGTGATCATTTCAGTCGGATCGCCGAATTCTAATTTTAACGCTAGCTCGCCCAAGAAACTCAAAGCTGAGTTTATATCTCCGTGCAGTGGACCTTTAACTAACGTATTGGAAGATGGACGTAGTAAATGTGctatttgtaataaaatattcagtaAGCAGAGCCAACTCAGGTTACATGTAAATATTCACTACTTCGAGCAACCGTTCAGATGTGAATCGTGTGCTGTGTCGTTTCGCACGAGGAATAATCTTCAGAAGCATTTAGGATCGAATTCGCATTTGAATAAAgtGAGCATGAATTCAGCCACTGGCGGCCAAACTTCTACCAATAACCCTAGACCATTCAAATGCGACGATTGCAACATTGGATTCAGAATACACGGCCATTTGGCCAAACATTTGCGTTCTAAAATGCATATCATGAAGCTAGAGTGCCTGGGGAAATTACCATTTGGTACTTACGCCGAAATGGAACGATGTGGGATcaatatgaatgatatcgataCGACCGACTGTGAAAATTCATTGGAAAGTTTGCAGaGAATAGCAAAAGGAGTGGTGAACTCAGTTATGTACGTGAATAATACCgacgaagaaaataaaatgggTGCTGATTCGTCGTTCTAA
Protein Sequence: MYLVVGVSESSTFMTRLISVTGIKIENEPENDENEPNDGKSENTRIDAQKTNNENCTLLDQASTNAPENISNSLANATTNGSNKYLHKKFKKMVALLSDDCTSPATGAAAAVAATVDQPNRVVSSAMVRESTPWAITATTTSSTINTSITSTPAIENHRQLQQHHPSSINATVTTTMQSSLPKMATSATPPTPPRIDGKLTTVPESAGNHLVVNRECNSTSPYKSNSEDDGVATVQAKCVCPYCDLVCSKPSVLEKHLRAHTNERPYPCLPCGFSFKTRSNLLKHCRTSRSHSLKLEEAGVENNTSMVSRGGLQLDEDCDETEDDAMVSTTSSTTSLASIKDSSESSSNDENKAFSTENVPRTGIYKPKFHKAIYTQNNAVAPCATATIASKSISGTVEPSTMNKLGLQLKIPASGNAAHNSSASSTPSTPSPFTSGSSPSPEFLHRHISKLISENQAIVETTDPFWSKKFYQRSKEGSPSSPLSNSSSSSIDSSFKKIPAGVVIVKPSTELNIEDKLPVESKLAHALLQPRVVKAATAIVPGASETFAISSASSTVSVVVEDTQPLNLSICKDTRPKSYLDEEDDKTATQAEYGRLMAANEPATRFVPNGRLCSAGEVYPKDTHHHHQGFVKATTSATLPDTCSLCDETFDNYDKLKTHILYQCKGNKNHSLSSTASISNQLGSVNHKSTGSGNDARVFLRVGPSDPSSIPLHQLAKANANQSPGPRLGNTPLIGGYKKLSVITTTGGPGPSLEKCTTTSTKNNQHHVLIEQHKTVTSLKSLEELSNAPMKGANHFVYNAALMDDAVDKSSLKVATAECKEEAKNSIIVSKTACIAEDTKLISIKCASMVAAKPKDASGVFKSSSGLAVDLATLSKTTSSATVPKISQFVIPVVQGVPNLATIQSVQAAALLAATTNSDIHSMSPISAAAAGYKTPTTPTAALPKAKSTHVNGGVVTILHGGKVIPYVPGMPGPQSAAAAFLQVDGYEKKSSEAVKRKYDDGGPINGMIKHPNHQRIEELPSPSTPQGAKIFHGVKIKEEIVSSIYLDQEKDTSGAKFARPCSLPLKPGTFVPKKLQPGTSSVLPLISPETPRPNKSYGQLYIGGNAYTYLGLKCSTRSTFCTLHKSQPTYVPLSPEHNKVSMYSNWKIRSDVDPYLRGVPPTKAMSCYDSRQRYSSYTVVHTKMKDAVTHSSYWFNRSKPHADHDTAIKQCIDNENKDNIQMQSQSDLHARNEDGSKCNRFLVGGIESTDDYTYIRGQGRGKYVCLKCGIRCKKPSMLKKHIRTHTDVRPYICKHCVFRFKTKGNLTKHMKSKAHYKKCMELGIVPVPTVVDDSYVDEEILSKQVTEDPKCQLEREVARSLLSLSKMSHQTVSEQYANAGLVPLNARPNTYPYNFSANPHLSSKPHTPTLTLISEQKEQEKVSKNTGLARELQPIVTSNAVIKPKSESSHTNERYYFGSAGTDKEHVPMETNEPPVPELVVKEASPMITGKNTFVDRCSGGGGGGGMSAKIETLERGNDIESKENLALTPTPDGEKAESSTSVIISVGSPNSNFNASSPKKLKAEFISPCSGPLTNVLEDGRSKCAICNKIFSKQSQLRLHVNIHYFEQPFRCESCAVSFRTRNNLQKHLGSNSHLNKVSMNSATGGQTSTNNPRPFKCDDCNIGFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERCGINMNDIDTTDCENSLESLQRIAKGVVNSVMYVNNTDEENKMGADSSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01263888;
90% Identity: -
80% Identity: -