Plon002070.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_900064475.1
- Location
- FIZU01002985.1:35313-37208[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.2e-11 1.6e-08 34.9 0.0 1 42 345 388 345 391 0.91 2 5 2.3e-10 3.1e-07 30.8 1.3 3 44 399 449 399 451 0.94 3 5 5.9e-06 0.0077 16.7 0.0 1 42 457 497 457 500 0.92 4 5 6.2e-17 8.2e-14 51.8 0.4 2 45 509 553 508 554 0.95 5 5 8.4e-15 1.1e-11 45.0 0.8 1 43 573 615 573 616 0.94
Sequence Information
- Coding Sequence
- ATGGAAACGGAAAACGAATACGATGACGAACACGACAATACTAACTGCGAGCTTGTATCTTTACTTATGAACGATAGCAGAAACCCGAATCAGGATGCAGTTGAAGAATCCGACGAAGAAACACTCGATTATGTCAGTCTGTCTAAAGTTCCTTACAATGACTACATCGTACCTTGCGACGACGATATTCGAACGGATTTCTCCGAAGACGATGATAATGGTAGTGAAATAATTAGAGAAATAGAATTGATCACTCCAACCGTATCGAGCGAATTTAATCAGAGCGATAATCGAGGTTTGAACGACTTCATCATTAATTGTATTcaagacgaaaaaataaaaaatgaattaataacTCTGAACATTCAACTCGAAAGGAATATTGAAAGTTGCAATAAGGTTGCAGCTGAAGCAACAGCGgcattgcttgaaaaaaaggcGCTAATGAAAGAATACAaaataatcgaagaaaaactTCAGCAAAGGCGTCCGGCTGAAAACgctaaattaagaaaaataaagaagaaaaagggTAAACATTGCGCCGAAACTGGACACAATCGCCATACGTACTTTTGTCGCTTCGGTATgccttattttaaaaacagagATCGTTATCCGGCCGATTATAATTACGATTTGAGAGAATTAAACAGTCGAAATCAAATCACACTTTCTAAATTACCCAAAACgcgtagatttttaaaaaacgatgcTCCTGTTTTAAATACGTTGATTTtacaacaattgaaaattaaacgtgTTGATCAGCTCAATGGATATTTAAAAGatgtgaacaaaaaaatacaattagcGGAGCACGATGACGATGGTCATAGTGAACTATCCGAACGGAAGAGAAAAATATTAGATGCTATAAAAGAAACCCCTAACGTGTTCAATTTAGACGATACCAAAGATTGGAATTTGAAGGTAGATTTTACaacattgattaaaaatgataactaTCACAGATTCAATTCCGAAGATTTTGAAAGATTGTGGAATCTACTAGCGAATCCTCAACTATCTCGAACAGAGTTCACCTCCGAGGAAACAACAAAACTGAAAGACCTAGTTGTCAAGCACGGTGCTCAAGATTGGGACCGCATTGCTCAACTTTTAGGTACCAATAGATCCGCATTCATGTGTTTTACAAAATACGTATCGGTAACCAAAAAAGGGAAATATATACCTTGGACGAGGGAAGAAGATGAGTTATTGCTTAAACTCGGatctaaattgaaaaccaGTAAACAGTCTGGTTCGATGTACCATTGGTGGAGAAATATTCGTAGACACTTTCCAAATCGTACCTATAACCAAATACATGCTCATTGGTCTTACGTCTTAGctcctaaattgaaaaaaggtcgTTTCACCCAAGAAGAAAATGTTGCCATACAGAGATACATGAAACAGAATAAATCGTACAGCGAAATTGCCAAGCTTATCGGTAATCGATCGTGTGTCCAGATTCGAGCTCATTTGAAACATAACGAATGCACGGATCGTATTAAAAATGGTCCGTGGACCAGAGACGAAGAAAATACATTACTCGAATTGATCAGAGAACACGGTGATAAAAACTGGGTCACAATTAgcaaattaatgaaaacaaGAACGAGAACTCAATGCAGATTGAAATATtcgcaaatgaaaattaatcaaaatgcTAATCCTCGCAGCGAGTCGTCTTCCGAGGAAGGTTTTCGTAAAGGGCGATGGACTGACGAAGAAAACGAATTATTTACTAAATTGCTCGAAAAGTATGGTCGTAAATGGGCACTTATTagtaaagaaatgaaaaccaGGACTCGTTTGCAATGCTCAATCAAGTATAAAACTGATTTGATTGTGAAGCCGAAGCAAACTGATGCAAAAAAAGTATCTtga
- Protein Sequence
- METENEYDDEHDNTNCELVSLLMNDSRNPNQDAVEESDEETLDYVSLSKVPYNDYIVPCDDDIRTDFSEDDDNGSEIIREIELITPTVSSEFNQSDNRGLNDFIINCIQDEKIKNELITLNIQLERNIESCNKVAAEATAALLEKKALMKEYKIIEEKLQQRRPAENAKLRKIKKKKGKHCAETGHNRHTYFCRFGMPYFKNRDRYPADYNYDLRELNSRNQITLSKLPKTRRFLKNDAPVLNTLILQQLKIKRVDQLNGYLKDVNKKIQLAEHDDDGHSELSERKRKILDAIKETPNVFNLDDTKDWNLKVDFTTLIKNDNYHRFNSEDFERLWNLLANPQLSRTEFTSEETTKLKDLVVKHGAQDWDRIAQLLGTNRSAFMCFTKYVSVTKKGKYIPWTREEDELLLKLGSKLKTSKQSGSMYHWWRNIRRHFPNRTYNQIHAHWSYVLAPKLKKGRFTQEENVAIQRYMKQNKSYSEIAKLIGNRSCVQIRAHLKHNECTDRIKNGPWTRDEENTLLELIREHGDKNWVTISKLMKTRTRTQCRLKYSQMKINQNANPRSESSSEEGFRKGRWTDEENELFTKLLEKYGRKWALISKEMKTRTRLQCSIKYKTDLIVKPKQTDAKKVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -