Plon013130.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- Dnttip1
- Assembly
- GCA_900064475.1
- Location
- FIZU01011587.1:1509-3761[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 8.9e-05 22.5 0.1 1 38 426 462 426 469 0.93
Sequence Information
- Coding Sequence
- ATGGTTGTGAATAAATTACAAAGAGGTTTTTCGTGGGATTCCTATACTCGATTCGTAAATTCAAATAACaatgttttaaataataattggGTCAATAGTGACAGATTTTCAGGAAATGAATCTGTCACTATTAGCGAACCGCTGGTTGAATGGaaaaacacattCCATATGCGACAAGtaaccttggaaaatttggctGATATGGGGGTCAACGAAAATGGAGGGAAAAATGCTGTGAAGGCAGCAAAAATGCGAGgtagaaatgttgtaaatgcGGCCAAATCACTGGATTTATTgagacaaaatattcaatcagCGATTAATAACGATATCGATcgtgttattaaaaaatacttagaTATGTATTTTGTACCAGCAATTAGTAACATTCGGGGTAACCTAGGACAAGGTAGCGTTAATGAAGAACATGTTAGAGAATTATGTCGTACGATGTTAGATGAAGCTAAACACTTGTACCTTAATTCACCTCTTTCCAGAAGTGATTCTCCTTTTAATGCTGCTGCAGATACTGGAGCTTTGATTGAATCTAGATTTGGCAATAGTCAAGATGATAATGAAGATAACAAGcgtatgtttatttttggaaaacgtaAAGAACCagacaatttaaataattccaATTCTACTCAATTACTTTTACCTCATTCGAAGAGAAAAACCATCATAAGTGTGACACCAtgtatatttaaaaatgatcctTCAAGAATCACTTCCAAAACATTGTTTATCATGTCATCGAGAGTTAATAAaGTGTTAGGTTATGGAGGTTTGCGAGGAAAATTGTTCATCAAACATCCTGAATTGTTTCGTTATTGCGTAGATTTAGAAGATAAAGAATGGTTGATAAGACATAAATTACATTATCTGTCACACAACTCATCCGGTTCCtcgtatattttaattttagacgATATTAGGGagcttttgaatttagaatgCTATAGaaataatccTAGCGTATTACGACATGAACTGAAAGGATTCGAAGCTCCGGAAttcatgctgaaaaaaatgcgattcgCCATTACTCGTGGAAAAACGACGAGGAATTTAGAAACCGTCCATCAATTAAATTTATCCAGTCCAGGAAATTCTTCCCTAACGTTGCCAAGTTCTTCGTTTAATAGTTCGATTTCGGAAAATCATACTCTGATGGATCAAGATCCTTCTCAAAATGTAGCTAGTGGCGTTATACAGCCCACCAATGTTTTAAtacaagttaaagagaagaaaaaagtgCCGAAGAGTAATTGGACGGAAGATGCGATGCAGAAGGCTTTGAGACTGATTTCAAGAGGAAGGTCTCAACGTTACGTTGAAAGGAAATTCGGCATTCCACGAAGAACGTTGCGAAATCGTCTCAAAATAGCTGCtacttcgagaaaaaatttctga
- Protein Sequence
- MVVNKLQRGFSWDSYTRFVNSNNNVLNNNWVNSDRFSGNESVTISEPLVEWKNTFHMRQVTLENLADMGVNENGGKNAVKAAKMRGRNVVNAAKSLDLLRQNIQSAINNDIDRVIKKYLDMYFVPAISNIRGNLGQGSVNEEHVRELCRTMLDEAKHLYLNSPLSRSDSPFNAAADTGALIESRFGNSQDDNEDNKRMFIFGKRKEPDNLNNSNSTQLLLPHSKRKTIISVTPCIFKNDPSRITSKTLFIMSSRVNKVLGYGGLRGKLFIKHPELFRYCVDLEDKEWLIRHKLHYLSHNSSGSSYILILDDIRELLNLECYRNNPSVLRHELKGFEAPEFMLKKMRFAITRGKTTRNLETVHQLNLSSPGNSSLTLPSSSFNSSISENHTLMDQDPSQNVASGVIQPTNVLIQVKEKKKVPKSNWTEDAMQKALRLISRGRSQRYVERKFGIPRRTLRNRLKIAATSRKNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00725441; iTF_01472393; iTF_01263289; iTF_01490908; iTF_00194238;
- 90% Identity
- iTF_01263289; iTF_01490908; iTF_00194238; iTF_00725441; iTF_01472393;
- 80% Identity
- -