Plon005587.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- bab2
- Assembly
- GCA_900064475.1
- Location
- FIZU01058808.1:16148-23078[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-13 5.6e-10 39.1 0.0 2 44 414 456 413 457 0.93
Sequence Information
- Coding Sequence
- ATGCAACAGCAATACTGCCTCCGCTGGAAtaaccataaaaataatttgctaACGGTGTTCGGCGAATTATTCCGGAATGAAGACTTCACAGACGTGACGTTGGCTTGCGAAGGTGGCTCGGTGATCAAATGCCATAAAATGGTTTTGGCGGCGTGTTCGTCGTATTTCCAAAATCTCTTCTCCGATCTGCCATGCAGTCATCCGGTGGTCGTATTGAAGGATACGAGGTATAGCGAAATACAGGCTATACTCGAGTACATGTACAAAGGCGAGGTTAGCATAACGCAAGATGAAGTCGAACCTTTATTACGAGTCGCCGAAGCTTTGAAGGTCAAAGGTCTTGTTGGCGAGAATAACTATCGCAATAATAAGAACGAATACACGTGCAATAACATCAGAACCTCATCTTCATCGTCGCCGTCACCTTACAACATATCCAATCGTTCGAATATCGGACGTAGTTCGTCATTGATGGCCATGCATAATGATCTAAGTAGTGCTCGAGGTAACGCCAACGATAACGAAACCATCGACCATAGTCCAACTGAAAATCAATTCTACAACGACCACCGAAATAATTCCTCGCCGCCTCATTCGATCAGCATGCACAGATCGTTCCATAAAAACGCGTCTTGTTTTTACGGAAAACCCACCAATTCTGCAGACGTACCGGATAACAGGATACCGCCACTGCCCATCTGGCCTATGGCTGGTTTACCAGTGGCCAGTTTTCCTACGCCGCAAACCACCACCGCTGCGATGTTGAATAGCTGTCATGAAGCGGTCATCGCTGCGAGTAATGCTAGCATGCCTCCTTTGAGGCGGAAAAAGTTGTCTAGTTTGCTTAATATGAGCAGCGAAAGAGAAACAGGTACGCCGATTTTACGTGAGGCTCTCGGTCAAGGTGAAACTGATTCTTCGCAGCCTATGTCTCTAGTCCGTCACGATGGCCAAGATCACGAGCTCCAGCAAAATGGTCCTAATGTACCGCAAGATCTTTCTTATATGAATAAGAGTATGAAAACGGAAACAATGTCCGAAGATGGTCATTCGCCGTACATGGAAAATTCCTCATTTACAGATGAAGATTTCAGTCAAGAAAGGggtagCAAAACCATGCATTCATCACCTTCATCGCCACAATCATATTACATGGAATCGAAAGGAAACAATCCGTCGGCTTTAGCAAACTGCGTACAATCTCAGAAACCAGAATGGAAACGCTACAAGCAATACACCAAAACGGACATTTCATTGGCCATCGAATCAGTTCGCAACGGTATGACCGCATTAaaagcatcgaaaaaattcggcgTTCCTTCCAGAACCCTTTACGATAAAGTAAAAAAGCTCGGCATTACGACCACCCGACCATCTCGTCGAACGAATGGCAGCACTGGGGCAGCTTTCCCATACGGTGTAAGTGGCGCTGGCGGTAATATGCTGCTGGGAATGGATGAAAATAGTTCGCAAGGGGGTATGCTGGAACATGGATTTTTCCAACATGTGTTAGAAAGCGGTACAATGAAAATAGAAAGTTTGGATCGTGCAGCGGTGCCTTCAACGTCGATATCCTTACAATCGCATCCATATCTGCAGCACAATTTAGAAATGGAAGAACGTATGAAATCTTTGGAGGCTGAAAAACGCATGAAAATGGAACGAGAAGATGTATCCTTGGAGCACGAAAATACCACCGGTTTGTCTTCGTCACCGATACCCAATAATAGATCTCCAAGTCCTAATCCTAATCGTATTCAATACATCCAACGCAGCGAGAGTCTAACTCCTTCGCCACCATTGCCCCCATCAGTGCCACCGGCTGATGAAGATGATTACCAAGATCAAGTCGAAGATTTATCCATGTCCAGGAAACCAGAACAGCAGTCCAGAGTTATCGTGTCACCTATAAATCAAACCACAGCTGCAGCTATGTTAGCTACGTGTAGCGGAGATAGCGGAAGGGATTGA
- Protein Sequence
- MQQQYCLRWNNHKNNLLTVFGELFRNEDFTDVTLACEGGSVIKCHKMVLAACSSYFQNLFSDLPCSHPVVVLKDTRYSEIQAILEYMYKGEVSITQDEVEPLLRVAEALKVKGLVGENNYRNNKNEYTCNNIRTSSSSSPSPYNISNRSNIGRSSSLMAMHNDLSSARGNANDNETIDHSPTENQFYNDHRNNSSPPHSISMHRSFHKNASCFYGKPTNSADVPDNRIPPLPIWPMAGLPVASFPTPQTTTAAMLNSCHEAVIAASNASMPPLRRKKLSSLLNMSSERETGTPILREALGQGETDSSQPMSLVRHDGQDHELQQNGPNVPQDLSYMNKSMKTETMSEDGHSPYMENSSFTDEDFSQERGSKTMHSSPSSPQSYYMESKGNNPSALANCVQSQKPEWKRYKQYTKTDISLAIESVRNGMTALKASKKFGVPSRTLYDKVKKLGITTTRPSRRTNGSTGAAFPYGVSGAGGNMLLGMDENSSQGGMLEHGFFQHVLESGTMKIESLDRAAVPSTSISLQSHPYLQHNLEMEERMKSLEAEKRMKMEREDVSLEHENTTGLSSSPIPNNRSPSPNPNRIQYIQRSESLTPSPPLPPSVPPADEDDYQDQVEDLSMSRKPEQQSRVIVSPINQTTAAAMLATCSGDSGRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262630;
- 90% Identity
- iTF_01262630;
- 80% Identity
- iTF_01262630;