Basic Information

Gene Symbol
Kdm5
Assembly
GCA_900064475.1
Location
FIZU01010674.1:14956-19731[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-23 3.3e-19 69.5 0.1 3 89 123 205 121 205 0.94

Sequence Information

Coding Sequence
ATGAAGAGCACGTTTAAAAAACAGATGTTCGTCGAAGCTAAAAATCGCGATTTAAACTCCGGTCCAACGTCATCGTCGAAATCAACGAATCCTCTTTCGTTCATCGATCCTGCCACGTACATGTCGAATGGAGAATTCGTATTTCGAGTACCGCCCGAAGCTCCTGTCTTCGAACCGTCTGTCGAAGAGTTCCTCGATCCGTTAGCTTACATCAATAAAATAAGACCGCTGGCCGAGAAAACTGGCATCTGTAAAGTGAAACCGCCGCCCGAATGGCATCCTCCGTTCGCCGTCGACGTAGATCATTTCAAGTTTACACCTCGTATTCAAAAGTTAAACGAATTAGACGCGAATACGAGAgtaaaattgtactttttggaTCGTTTGGCGACCTATTGGAATTACAGCGGCGTTCAAATACGTATACCAGCTATCGAAGATAAAACCGTCGATATGTATTCGCTTTATAGGATAGTCGAATTAGAAGGAGGATTCGATAAGataaacatggaaaaaaaatggtccaagGTGGCGCTTCGAATGGGCTACACGAATGATAAAAACGTCGGCCCGCAATTACGAACGTACTACAAACGCTTACTTCTACCgtacgaaaaattcgaaagaagTAAACTGAAAAATGGCCCAGAACAGGAAGAATCTAAACCCAACCTCGCCACCGCTTCCTCTTCCCCTGGTACCGCCGCTAGAAAAGATTCAGCGGAAACGGTTAAAGTAAAAACTGAACCTGGTGTTCAAGAAATGGGCAGCAAAAATTGCGGTAGCAGTAGACGTTGTACGCGTTCAAATTGCGATGAAAATGGCACCGAGATTTTGGTCAGCGATACGTTCAAAAATCCCACCATGCAGGATAAAAACAAGGAATTGCAAAGGTTGACGTTTTACGGTCCTGGGCCTAAAATATTGGGCTCGAACAAGAAGCAAAATTCGCCCAGTAAGAAGAAATCAGATCCAAATCAACCGGAAGATTTGTTAGCTGATTCGGCATGTATGGTTTGCGGTAACGGCGAATCCGAGGAATGTATTTTGCTCTGCGATGGTTGCGACGACGGGTATCATACGTTTTGTCTCGTACCACCCTTGACGGCTGTGCCGAAAGGCGAGTGGAGATGTCCTAAATGTATCGCAGCTGTGGTCAGCAAAGCTACCGATACCACGTTCGGTTTCGAGCAAGCTGAAAGGGAGTACTCTCTGCAGCAATTTGGCGAAATGGCCGAtcagttcaaatcgaattatttcaacatGCCCGTACACCTCGTACCCACTGAGAAAGTCGAACAAGAATACTGGAAAATATTAGCCTCGATGGATTCCAGCGTCACTGTCGAGTACGGCGCTGATTTACACAGCATGGATCACGGCTCCGGCTTCCCTACTAAAttagcgttgaaaaattccggCGATGAGAATCATTACTATAAATCATACGTCGAATCTAGCTGGAACTTGAACAACATCCCGGTTCTCGAGGGCTCGGTTTTGGGCTACATTAACGCCGATATTTCCGGCATGAAGATACCTTGGATGTACGTCGGTATGTGCTTTTCCACATTCTGCTGGCATAACGAAGACCATTGGAGTTACTCGATCAATTATTTACACTGGGGCGAGCCTAAAACCTGGTACGGCGTCCCCGGATCTCAAGCcgaacaatttgaaaaagttatgcaAGAAACTACGCCGGATTTATTCCGCAATCAACCGGATTTATTGCATCAGCTGGTCACTATCCTGAATCCGAACATACTGATGGATCGAGGCGTTCCGGTCTATCATATCGATCAAGCCGCCGGCGAATTCGTCCTAACATTTCCCAGAGCCTATCACGCTGGCTTTAACCACGGTTATAATTTCGCCGAAGCTGTCAACTTCGCTCCTGTCGACTGGATCCCCCTTGGTCGAGATTGCGTCGAGCACTACTCCAGCCTACACAGGTACTGCGTTTTCTCTCACGACGAGCTTATCTGCAAAATGGCTTCGGTAccggaaaatttgaattccaaGCTGGCCTTGGCCACGCATCAAGACATGCTGAAAATGCTCGACGTCGAAAATAAACAAAGGAAAGCGCTGCTCGAATGGGGCGTCGTTAACGCCGAACGTGAAGCTTTCGAGTTGTTGGCCGACGACGAACGCCAGTGCGCCGAATGCAACACCACCTGCTTCCTGTCCGCCGTCACTTGTAAATGTAGTCCGAAACGAGTGACGTGTCTGCGtcatttcagagatcactGCGGATGCACCGCCATCGACCATACCTTACGATACCGTTACACATTGGACGAATTACCAGTCATGTTGGAAAAGCTGAAAGAAAAAGCCGAATCGGTCGCTTCATGGGCTGCCAAAGTTCACGACGCTTTGGATGTCAACACGCCTAGATATATTTCGTTAACCGGTCTCAAAGAGTTACTCAGCGAAGCTCGAGAGAAACATTTCCCCGACGATTTATCCCTCAATCTATTATCAAAAGCCATCAAATCCGTTCAAGACGCTCTAGCAGTCGACTTCAAAAACATCCTGTCGCGTAAACAAACGCTAAACAAGAAGGTCACATTGACCGAAATTCGCAGCTATTACGAAGAGCTACAACGCATACCTTGCGTACTGCCACAAGAAAACACCGTCAggcatttcttgaaatttttagacgaaCTTCAAATCGATACCGATAAAATATTACGCAAAGAGAACGCCACGGTTAGCGAAGtggaaaatttactcaaacGAGGTAATTTCCCCAACGTCGAAATACCCTCCATAgatacgttgaaaaatcacaaaaaagtcCTCTACCTGATCGaagaattcaaagaaaaaaagaagaatccGTCTCTACTGACACCCGACGTCATTAACCAGCTGATCGCCTGCAGCGCCAGTATACCAAATGCCGAAGATAACGATCGAGTCGTCTCCGTCAAGAAAGATTTGTTGCTGACCAAGGAAAAAGTCGACGCTTGGGAGAAAAAAGCCGCCTCCTGTTTGACCAGCATCGTTACCAATAAGCAACTGACCTACGGTAATAAATTACCGTTgaataaattggaaaagttaCTCGACGAAGCCAACGCGGTAGATGCGTTTTTACCAAGTAAAGAGAAACTGCAATCGACCATTAAGAAAGTGTACGTTTGGAAGGAACGCGTCGATGGTCTGTTCGGGCCGAAAAAAGCAGCCCCGTTTTTAGaagttatcgaaaatctgTTCGAAGAAGCTCAAAGCATGAACGTGCAGTTGGATGATATGTTCAAATTGGAAGAGGTGTTGAACAAAGCGTTATCGTGGAAAAACGAAGTATACAAAATGTTCTTAGGCGAtacgaaattattcaatttgctAGAAGTGCTGATGCCGCGACGTAATTTACAACGAATCTGCAAATATAAGAAAAACGATAAACCGAACGCCACCGAACCGTCTCCCACATTCGGCGCGTTTGATTTCAATATCAAAGAGAACTTCGATCAAGAAAAAGTCGTGTCTTCTTTCAAAGTGGCCGAAAAAAGAGAATTCGAATTAATGCGCTCTCTCAGggtgaaaaatacgtataaaaagaAGCAAAGCGAATCGACGTTCTGCGTTTGTAATATGCCATCGACGGTGTACATGAAGGAGTGTATTTTATGCAAAGATCTTTTCCACGATCAGTGCTTGAAACTGTTGGCCAATTATTGGGAAGATAAGAAATCAAATTATCGCATATTCTTATGTCCGTTCTGTCAACGATCGAAAAGACCTAGCTCGACAATCGTAATGAACTCGTTaatcaaattgcaaaaaatacaaatccGCACGCTCGAAGGTATCGCCATGCAATGCCTACTCGATCGCGAATCCAAATGGAGAGAATCGGTGAACGAGCTGCTAAGTACACCCGAGCTAAGCGTGCTGACCAAAAATAGCACCGATCCGATTTCCAAGCTGGCCAAACACAACGCTCCGGTCGTTTTGAGCAGCGAGAATAAAAATAGCTTAGAATCGTTACTCTTCCGAGGATTCCTGCTCGAATTAGATTTACCCGAAAACGAGAtaatattcatgattttgcatAAACTAGACGCCAACGCCGATACGACCAATCAGAACGCTAATTCGAACGCCTGCAAACCATTCAGCCAGCACGCCAGCTTAGATAAATCCAGAGTCGAACTTGAACTAACCAACGAAACGTCGTCGTTAAAGAACGAGCTAACATCTGTCGCCATATTATCCAAAGAACGTAAACGTAAACACATTACGCAGCAGGAAAACAACGAAAACGATCTGTATTCCAAGACTTTCGCACCCCCTGCGGCCaccgaaattaaaaagaaagagaCGACGGTTCGTAAACGAGTCCGAAAACAGAACATGTCGCCGTATAAAAGAGCTTCGGCCGCCGAAACCAGGCAGCAACGAGAAATCGCCGAGAAGAATCTTTCCTCCGTTATTTGCATATCGTCGCCGGAAAGAGGCGATAAAACAGACGACGACGTCGATGACGAAGAAGAAAGCGAATGCGTGGCTACGAAATGCCTAAAACCAACCGGAGAGTTGGTCGAATGGGTGCAATGCGATTATTGCAAGAATTGGTTGCACATGGTGTGCATCGGAGGgacgaaaatcgaaatcgataacCAGACCGAATTCATGTGCACGTTGtgtaaaaatgtggaaaaagcCAAAAACGAAGAGGACGACGATGACGAGGAAGATGACGATGTTGTGTTCGTCGAATATGCCCCAAATAGTACCACTCTATGTTCCTCGTAG
Protein Sequence
MKSTFKKQMFVEAKNRDLNSGPTSSSKSTNPLSFIDPATYMSNGEFVFRVPPEAPVFEPSVEEFLDPLAYINKIRPLAEKTGICKVKPPPEWHPPFAVDVDHFKFTPRIQKLNELDANTRVKLYFLDRLATYWNYSGVQIRIPAIEDKTVDMYSLYRIVELEGGFDKINMEKKWSKVALRMGYTNDKNVGPQLRTYYKRLLLPYEKFERSKLKNGPEQEESKPNLATASSSPGTAARKDSAETVKVKTEPGVQEMGSKNCGSSRRCTRSNCDENGTEILVSDTFKNPTMQDKNKELQRLTFYGPGPKILGSNKKQNSPSKKKSDPNQPEDLLADSACMVCGNGESEECILLCDGCDDGYHTFCLVPPLTAVPKGEWRCPKCIAAVVSKATDTTFGFEQAEREYSLQQFGEMADQFKSNYFNMPVHLVPTEKVEQEYWKILASMDSSVTVEYGADLHSMDHGSGFPTKLALKNSGDENHYYKSYVESSWNLNNIPVLEGSVLGYINADISGMKIPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEQFEKVMQETTPDLFRNQPDLLHQLVTILNPNILMDRGVPVYHIDQAAGEFVLTFPRAYHAGFNHGYNFAEAVNFAPVDWIPLGRDCVEHYSSLHRYCVFSHDELICKMASVPENLNSKLALATHQDMLKMLDVENKQRKALLEWGVVNAEREAFELLADDERQCAECNTTCFLSAVTCKCSPKRVTCLRHFRDHCGCTAIDHTLRYRYTLDELPVMLEKLKEKAESVASWAAKVHDALDVNTPRYISLTGLKELLSEAREKHFPDDLSLNLLSKAIKSVQDALAVDFKNILSRKQTLNKKVTLTEIRSYYEELQRIPCVLPQENTVRHFLKFLDELQIDTDKILRKENATVSEVENLLKRGNFPNVEIPSIDTLKNHKKVLYLIEEFKEKKKNPSLLTPDVINQLIACSASIPNAEDNDRVVSVKKDLLLTKEKVDAWEKKAASCLTSIVTNKQLTYGNKLPLNKLEKLLDEANAVDAFLPSKEKLQSTIKKVYVWKERVDGLFGPKKAAPFLEVIENLFEEAQSMNVQLDDMFKLEEVLNKALSWKNEVYKMFLGDTKLFNLLEVLMPRRNLQRICKYKKNDKPNATEPSPTFGAFDFNIKENFDQEKVVSSFKVAEKREFELMRSLRVKNTYKKKQSESTFCVCNMPSTVYMKECILCKDLFHDQCLKLLANYWEDKKSNYRIFLCPFCQRSKRPSSTIVMNSLIKLQKIQIRTLEGIAMQCLLDRESKWRESVNELLSTPELSVLTKNSTDPISKLAKHNAPVVLSSENKNSLESLLFRGFLLELDLPENEIIFMILHKLDANADTTNQNANSNACKPFSQHASLDKSRVELELTNETSSLKNELTSVAILSKERKRKHITQQENNENDLYSKTFAPPAATEIKKKETTVRKRVRKQNMSPYKRASAAETRQQREIAEKNLSSVICISSPERGDKTDDDVDDEEESECVATKCLKPTGELVEWVQCDYCKNWLHMVCIGGTKIEIDNQTEFMCTLCKNVEKAKNEEDDDDEEDDDVVFVEYAPNSTTLCSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01490762;
90% Identity
iTF_01263140;
80% Identity
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