Basic Information

Insect: Protophormia terraenovae
Gene Symbol: -
Assembly: GCA_951394005.1
Location: OX596077.1:130891660-130901650[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00067 0.064 14.8 1.0 1 23 120 142 120 142 0.98

2 15 1.8 1.7e+02 4.0 1.0 1 23 148 171 148 171 0.93

3 15 4e-06 0.00038 21.8 0.8 3 23 414 434 412 434 0.97

4 15 0.16 15 7.4 0.5 1 23 487 510 487 510 0.96

5 15 5.6 5.3e+02 2.5 2.8 2 23 570 591 569 591 0.93

6 15 0.0085 0.81 11.3 2.6 2 23 768 789 767 789 0.96

7 15 0.19 18 7.1 3.2 1 23 795 818 795 818 0.96

8 15 1.2 1.2e+02 4.5 0.1 2 23 853 875 852 875 0.95

9 15 0.0043 0.41 12.3 0.5 1 23 889 912 889 912 0.97

10 15 2.9 2.7e+02 3.4 6.0 1 21 1092 1112 1092 1113 0.94

11 15 0.031 3 9.6 8.5 1 23 1131 1153 1131 1153 0.98

12 15 3.7e-05 0.0035 18.8 0.8 1 23 1158 1180 1158 1180 0.96

13 15 0.035 3.4 9.4 7.2 1 23 1186 1209 1186 1209 0.94

14 15 0.002 0.19 13.4 0.5 1 20 1214 1235 1214 1238 0.90

15 15 3.9 3.7e+02 3.0 4.7 1 19 1244 1262 1244 1267 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00067	0.064	14.8	1.0	1	23	120	142	120	142	0.98
2	15	1.8	1.7e+02	4.0	1.0	1	23	148	171	148	171	0.93
3	15	4e-06	0.00038	21.8	0.8	3	23	414	434	412	434	0.97
4	15	0.16	15	7.4	0.5	1	23	487	510	487	510	0.96
5	15	5.6	5.3e+02	2.5	2.8	2	23	570	591	569	591	0.93
6	15	0.0085	0.81	11.3	2.6	2	23	768	789	767	789	0.96
7	15	0.19	18	7.1	3.2	1	23	795	818	795	818	0.96
8	15	1.2	1.2e+02	4.5	0.1	2	23	853	875	852	875	0.95
9	15	0.0043	0.41	12.3	0.5	1	23	889	912	889	912	0.97
10	15	2.9	2.7e+02	3.4	6.0	1	21	1092	1112	1092	1113	0.94
11	15	0.031	3	9.6	8.5	1	23	1131	1153	1131	1153	0.98
12	15	3.7e-05	0.0035	18.8	0.8	1	23	1158	1180	1158	1180	0.96
13	15	0.035	3.4	9.4	7.2	1	23	1186	1209	1186	1209	0.94
14	15	0.002	0.19	13.4	0.5	1	20	1214	1235	1214	1238	0.90
15	15	3.9	3.7e+02	3.0	4.7	1	19	1244	1262	1244	1267	0.92

Sequence Information

Coding Sequence: ATGGGTGAAAAGAAATTTGTACAGGATTACTCCATGGTGTGTCGGACATGTCTGCAATCAAATGTGGAAATGGTAAATTTAAGCGCGCTTATTAATGATAATATTCGAGaagaaaacacaaaaatttcctatatgGAATGTTTAAAAATGTGCATACAACTCGAGGAGTCCCTAGATGTCGAATTGCCAGAAAGAATTTGTTTAGAATGTGCCTCTGCCCTGCAAGTGGCCTATTGGTTTATGAAAAATGCCAGCCAAGCACAGGAAttgttgaaattaaaattacgTGAAATCAAGCGTAAAAAACAGCAAATTGAAATAGAGgCTGCTGCAGAGGAATTAAAAAAGCCTAAAAGATATCGTTGCAAAATTTGCAATGTTAAGGTGGAAACCAAGAGAAATCTCAAAGATCATGTTAAATTACATTTAGACATTATTGTTTATAACTGTCAATTATGTTCCTTTGAATCAAATAATCGCAATAGCTTAAGTGATCATTATATCCAAAGCCATGCTGTAGAAGCATCAAAGGAACAATTGAAACCAAAAACCAAAACATCAAACTCGACATCATCCCCTTCAATGCCTGCGATTTCTACAACCCACGATCAAATGATGATGGGTGCCATTAATaatgaacattttcaaatattaaacgAAGATACAACACAACCATTACTACAACCGCCGCCAccaacacaacaacaacagtcGGCTTATGAAACATTTGCAACGCCTCTTACTGCAACAAATACATCATGTACCACCACCGCCGATGCTCCCATGCAAGTCTCCACAATTATAACAACAAATATTCCTAATTTTAGCACAATATCAGCTGCACCTTTTACTGCATTGGAGAGTGAACTAAATACGGTTGCAAATAATGATCTTAATGTTGCTAACGAATTTATGGTTATGGCTGATGGTAGTTTAGAAAAAGTCATGAACAAAGGTGTTGTTATTGAATATATAAATGTCCCCAATAACAGTAACAATTTAGCTTTGGACAATGGCATAGTTTTAGACAATATATTACAAATGCAAAATATTGACAATAATACTTTAATCCTAGAACCACAACAACAAAATGATATTGTCCAAATGGATGTAGATGATTTGATAATAGAGGATCCGGGTGATGTAATTGAAGAAACTACagtttccgaACCTATTCCTCCTCCTCTTGATGAGGAAATAATACCTGTATCTATTATAGAGCAGCCGAAAAAGATTAATTGTAAGATTTGTACCAAAGATTTTGTGACCCAGGAACAATTAAAGAATCATATGTTAACGCACAATGAAATTCCCCACTTTTTTTGTGATCaatgtaaattttatacattCTTTAAAATCGATCTACATCAACATTACAAAAGCAAACATAATTTACAACCGACCAACAAACAATTACAacccaaaaataaacaaaaatcaacGACTGTTGATGAGTTCTATGCCTGTGATTTATGTTTTTATGAAGCCGAATCAAAGATTGACCtaaaaaaacattacaaaatTAAACACAATGTTGAGGCAAATGAAATACATTTAAAGCCATCAAAAGTGGCAAAAATAAATGCCAATTTATCACCGTTAACAGCAAAAGCTAGGGCCGCATCAATAGTAAACAAAGCAACAACCTCCgctaaaaatgttaaaatacaACCGCTTGAAACAACACCCGATTATCCAAATGGTTTGAATTGTCGCAAATGTCATGAGGTGTTCTATTGGCGCAATAAACTCTACGAACATTATAAGTTGCATAATGCTGAGGAAGCGGCTCTTAAGCAAGAGAGACAACTtataaaagttcaaaataagCTGTCAACCACAACGAATTTATATCAGCAAAACAACAAGACTAAAGCTACAAAAACACCAACAATTCAAACGCCCTCATTAATAGTGGCACAATCTCCGTTGGAAACAACCAGTTTAGATACATTAGCATTAAATGTCACTACGCCCAATAGCAATAGTACCACTATAAATTCAACTTTAGCACCACTGACACCATCTTCTAGCTCTACATATACTTTACCTTCGGATGCCATACCACAAATTGTAGAAACCGAACAGACTATAGAAAATGATATGGATTTCGATTTTAATGGGGATGATGCTTTATTTGGTGATTTTGATGATGATGTGGATGTAGAAAATGATTCAGATGATAACGATACTGAATTTCGTAATGTTTTGTTAACATCGGATGATGATTTTGAAGATATGTTACAGGAACAAAATAGTTTGAATGTGGTAGATGCAGCTACAGTCACCACAACTCAATCGTATTGTGCTCATTGTCAAAAGTCATTTTTAAGTCAATATCAATTTGAAAATCATATGTTTGTTCATAGAGGGCTGGCTCCTTATCGTTGTGAAATGTGTACAAATCTCTACAACACCAAACGTTGTCTAATACGCCACTATAAAGCTGTACACAAAAGTGTACCAACCCGCGACATGATCCAAGCTAAAGGTGATAAAGtgTGTGGAGATAAGACCTCTTTACAAGATTTAAAACTGGAAGAAACCACTActttaatttGTGCTAAATGTCCTTATgagtcttccgattttaatgatATTAAATTGCATCTTAATACTAGTCATAATGTATGTGATGAATCTTATATAATGAAAAAGCTACCCTATGAATGTCCCCGTTGTATACGTTCATTTgccaacaaaataaaacttttaagacATTTAGAACGTAATCATAGTTCGACACCTATAAATCAACATCAAATACGTTTCGATAGTATGGACAATACAACGCCATTAGCTTCGTCATCATCATCGTTATTGACGTCAACTGCGTCATCTGCTTTTGTAATAGCAACAAGTACAGCGGCTACATCAATAACGACAACAATAAATAATCATGTAAATATGATGAAAACAGAAATTAGTGAAACAAACGCAAGTTGCGGATTCCATAATGTATTCATTAAACAAGAATatcaacaagaacaacaacaacaatacccTAATCCCGACACAACAACAGCAACTACAACAAACAGAAACAAATTATCAATTGAAGATGCCATAGCACCCAAAGATATTATGGTCTCACACTACCCAGAATCTTCTACCAGCTCAACAACATCCTCAGCAACAGCTCTGGCTTATAATGAAACCTTTATCAACAGCAAACATAACCCCTCCATTATCAGCTTCATGCCTTCTAGCTCAACAGACATCAACCCAAATTCATCAACCGCCCTAGACGATAACAACTATGAACAAcctttatttaaatgtaaaatctGCCTTTTAACTTGTTGCAATCttgaaacatttaataaacattCAAAACGTATCGAATGCCGTGAATCAAGCCCAAACACTCCTGGTGGCAATCGTATGCTCTTCGAATGTGAAATTTGTCATTGTAATTATAAGACcatgtatttattaaaacatcATTTAAAACGTCATATAGGACGAAAATTTTTCTGCCCAAATTGtccaaaaacatttataaataaagtgGAATTGGAAGCTCATAAACATGTTCATAGTGGTGAAAGACCTCATAAATGTGATGCGTGTACAAAATCATTTCGTTACGTTCATCATTTGAAGCGTCATAAAGATAGTGTGCATTTGGGAAAACGTCATGAATGTACAGAACCAAATTGTGGTCGTAAATTTACTACATTGGCTCAATTGAAGGTGCACGTATGGACTCATAATGGTATTGTGCCGTATAAGTGCCCATTTTGTTATCGTTTGTTTAAAAAGAGATTGTTactTCGTGAACATTGTTATAAAATCCACACAATTAATTTAAGCGAAGAAGAAATGGCTGAAATTTTCCGCAACAGTTTGGGCTATACAAATCCTCACGATTTTACTGTAACCATTGGTAATGGCAAAATGCTAAGGCGTGGTGATTTAGAAACTATGGGTGCTACTGGCGTTATAAAATCTTCATTTaaataa
Protein Sequence: MGEKKFVQDYSMVCRTCLQSNVEMVNLSALINDNIREENTKISYMECLKMCIQLEESLDVELPERICLECASALQVAYWFMKNASQAQELLKLKLREIKRKKQQIEIEAAAEELKKPKRYRCKICNVKVETKRNLKDHVKLHLDIIVYNCQLCSFESNNRNSLSDHYIQSHAVEASKEQLKPKTKTSNSTSSPSMPAISTTHDQMMMGAINNEHFQILNEDTTQPLLQPPPPTQQQQSAYETFATPLTATNTSCTTTADAPMQVSTIITTNIPNFSTISAAPFTALESELNTVANNDLNVANEFMVMADGSLEKVMNKGVVIEYINVPNNSNNLALDNGIVLDNILQMQNIDNNTLILEPQQQNDIVQMDVDDLIIEDPGDVIEETTVSEPIPPPLDEEIIPVSIIEQPKKINCKICTKDFVTQEQLKNHMLTHNEIPHFFCDQCKFYTFFKIDLHQHYKSKHNLQPTNKQLQPKNKQKSTTVDEFYACDLCFYEAESKIDLKKHYKIKHNVEANEIHLKPSKVAKINANLSPLTAKARAASIVNKATTSAKNVKIQPLETTPDYPNGLNCRKCHEVFYWRNKLYEHYKLHNAEEAALKQERQLIKVQNKLSTTTNLYQQNNKTKATKTPTIQTPSLIVAQSPLETTSLDTLALNVTTPNSNSTTINSTLAPLTPSSSSTYTLPSDAIPQIVETEQTIENDMDFDFNGDDALFGDFDDDVDVENDSDDNDTEFRNVLLTSDDDFEDMLQEQNSLNVVDAATVTTTQSYCAHCQKSFLSQYQFENHMFVHRGLAPYRCEMCTNLYNTKRCLIRHYKAVHKSVPTRDMIQAKGDKVCGDKTSLQDLKLEETTTLICAKCPYESSDFNDIKLHLNTSHNVCDESYIMKKLPYECPRCIRSFANKIKLLRHLERNHSSTPINQHQIRFDSMDNTTPLASSSSSLLTSTASSAFVIATSTAATSITTTINNHVNMMKTEISETNASCGFHNVFIKQEYQQEQQQQYPNPDTTTATTTNRNKLSIEDAIAPKDIMVSHYPESSTSSTTSSATALAYNETFINSKHNPSIISFMPSSSTDINPNSSTALDDNNYEQPLFKCKICLLTCCNLETFNKHSKRIECRESSPNTPGGNRMLFECEICHCNYKTMYLLKHHLKRHIGRKFFCPNCPKTFINKVELEAHKHVHSGERPHKCDACTKSFRYVHHLKRHKDSVHLGKRHECTEPNCGRKFTTLAQLKVHVWTHNGIVPYKCPFCYRLFKKRLLLREHCYKIHTINLSEEEMAEIFRNSLGYTNPHDFTVTIGNGKMLRRGDLETMGATGVIKSSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259609;
90% Identity: iTF_01259609;
80% Identity: -