Basic Information

Insect: Protophormia terraenovae
Gene Symbol: -
Assembly: GCA_951394005.1
Location: OX596073.1:160692335-160694637[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.3e-07 1.2e-05 26.5 0.6 1 23 504 526 504 526 0.99

2 6 0.0005 0.047 15.2 0.5 1 23 536 558 536 558 0.98

3 6 3.4e-06 0.00033 22.0 1.3 1 23 564 586 564 586 0.99

4 6 1.2e-06 0.00012 23.4 3.3 1 23 592 615 592 615 0.97

5 6 2.4e-05 0.0023 19.4 4.9 1 23 624 646 624 646 0.98

6 6 1e-05 0.00099 20.5 0.3 1 23 651 674 651 674 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.3e-07	1.2e-05	26.5	0.6	1	23	504	526	504	526	0.99
2	6	0.0005	0.047	15.2	0.5	1	23	536	558	536	558	0.98
3	6	3.4e-06	0.00033	22.0	1.3	1	23	564	586	564	586	0.99
4	6	1.2e-06	0.00012	23.4	3.3	1	23	592	615	592	615	0.97
5	6	2.4e-05	0.0023	19.4	4.9	1	23	624	646	624	646	0.98
6	6	1e-05	0.00099	20.5	0.3	1	23	651	674	651	674	0.97

Sequence Information

Coding Sequence: atggaaaataaaatatacccCAACTTGGAAGAAATATGTAGATTGTGCTTGAAAGAAAATGCTGGTACGGTAAGCATATTTCCTAAAGAAAAAAGTTCAGATAAATACGCGGCATTATCAATACCAATGCGTATAATGACTTGTGCCGCGCTCGAAGTCCAAGATTCCGATGATTTTCCCAAGAAAATATGTACTGAATGTCGTTTACAATTGGAAAAATCGTATTATTTTCGTAAACAAAGTCAGGCATCAGATGCAaagttaagaaaacattttcgCCTCATTGGCATGGGCAAAACCAGTAAAGTTTTTCTTAAGTCAGATGAGGACGATGATGATGAATTGGAATTTCAAGACACACTTGATTTCATCAGAGAGCAAGAGGACCAAcaaaaagaaaaggaaaaattaaaattcgataCTTTAATTAATGAATTGAAATTACAAAATGAGCaagatcttaaaaaaattaaagaaaatttaaggtTAAAGTGTCGAGAGGAACTAACACCTGAAATAAGGGAGCAATTGAAGAATGAATTGATACCAGAAATAATTTCCCAAGTGAAGAATGAATTAAGAATTGAAGTAGAAAATGAATTAGAAGATCAACTAAGAAAAGAAATAAGTGAACAATGTTTAAGTGAAGCAAAGGAATCTCTTCGTAATGAGGTGTACGAAGAATGCAGACAATTAGAAATTAAGAATCTATTAGATGACCTTCAGTCATATCtcattaataagaaaaaatcgcTGAATTCTACGTTAACCAAAGAAGTTATTAAAAGAAGTCGTAGTCCAGCCTTTGATAAAGATCCAGCAGAGAAGAGAAAATGCATTGtacaaaattcacaaaaaatagAAGTGATACAAATGTCACTAGATGACCTAAATAAtgagaatataaaaaaaggaagtATTATTTTATCTGACAACATAATAGAAAATAATGTGAATGCAAGCGATGAAGAGTGCGGCAGTGAAGGCAACTTTTTAATTTACGACACTGATGACGGATTTGAAGTTCAGAAGAAAGATAAAACTGAATACACCAATAACGATATGACAGAGACTGAAGTCACAGAGTATGAAGTTGAGGATTACATAGATTCCAATGCAGTTTATGAAAAACTCAATGAAGAAAATATCGACACAAATGAAGAGTCTGCGGAAACGTCAGCAACAACGACTTCATATCGTATTGAAGACAATGAGAATGGAgaaattcagtttttaaaaaGGTCTAATGATAGTATGAATCATGAAATGGATGAAGTGAATGCTAATCATTCGAATGACGATATAATGGTTATAAATTTTCCAGAAGGAATGGAAAATGCATTTGTAGAACAGGCCGAGGAAGTGAAATGTCTGAAAGCCAAAAAtactaaatctaaaaaatcATCTGGCAAAAAAGCTAAGTCGTCAGCAGTCACTACAACAGAAACAACATTTCTTGCAAAAACATATGTAAATCCAAAACAACGTAGTACGGATACACCGAAAATATTCAAGTGTAATGACTGTCCAATGGTGTTTTCCACAAAACCTTCGTTAGAGCGTCATTTACGTAGCCATCAAAAGATTGAAAAGACCGGCATTACTTACCAGTGTCCAGAATGTCAGATAGTTGTTTCTTGTTCTAGTGCTCTTCGACGTCATATGTATGTGCATTATGAAGAGAAACCGTTCACATGTAACGTATGTGAAAAATCGTTTGTGCAAAAAGAGATTCTCAAGAGGCATATGCAAACGCACACAGGAATTAAGCCACATCAGTGTCCTCATTGCGATCGATCATTCGCGCAACGCATTAATTTAACGCAACATATTAATCGTACACACTTGGAAGAGCCGCGTATTCAACAACATCAGTGTCATTTATGCCCGAAACGTTTTAATCATGCGTCTGGTCTAAGTCGTCACTTGGCTACACACAGTGGCGTTAGTTTTCAGTGTAGTGAGTGTGATCGAACTTTTGGCGATCGGTCGGCAATTAAAAGACACATTATTAGTATGCATAGCAATATGAAAAAAGAAGATGCTAAAACAAAAACTCCGTAA
Protein Sequence: MENKIYPNLEEICRLCLKENAGTVSIFPKEKSSDKYAALSIPMRIMTCAALEVQDSDDFPKKICTECRLQLEKSYYFRKQSQASDAKLRKHFRLIGMGKTSKVFLKSDEDDDDELEFQDTLDFIREQEDQQKEKEKLKFDTLINELKLQNEQDLKKIKENLRLKCREELTPEIREQLKNELIPEIISQVKNELRIEVENELEDQLRKEISEQCLSEAKESLRNEVYEECRQLEIKNLLDDLQSYLINKKKSLNSTLTKEVIKRSRSPAFDKDPAEKRKCIVQNSQKIEVIQMSLDDLNNENIKKGSIILSDNIIENNVNASDEECGSEGNFLIYDTDDGFEVQKKDKTEYTNNDMTETEVTEYEVEDYIDSNAVYEKLNEENIDTNEESAETSATTTSYRIEDNENGEIQFLKRSNDSMNHEMDEVNANHSNDDIMVINFPEGMENAFVEQAEEVKCLKAKNTKSKKSSGKKAKSSAVTTTETTFLAKTYVNPKQRSTDTPKIFKCNDCPMVFSTKPSLERHLRSHQKIEKTGITYQCPECQIVVSCSSALRRHMYVHYEEKPFTCNVCEKSFVQKEILKRHMQTHTGIKPHQCPHCDRSFAQRINLTQHINRTHLEEPRIQQHQCHLCPKRFNHASGLSRHLATHSGVSFQCSECDRTFGDRSAIKRHIISMHSNMKKEDAKTKTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259478; iTF_01194653;
90% Identity: iTF_01194653;
80% Identity: -