Basic Information

Insect: Protophormia terraenovae
Gene Symbol: Kr-h1
Assembly: GCA_951394005.1
Location: OX596074.1:25632754-25642067[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0066 0.63 11.7 3.0 1 23 147 169 147 169 0.98

2 8 2.8e-06 0.00027 22.3 0.5 1 23 223 245 223 245 0.99

3 8 3.4e-05 0.0032 18.9 2.3 1 23 251 273 251 273 0.98

4 8 7.3e-07 6.9e-05 24.2 2.8 1 23 279 301 279 301 0.99

5 8 1.5e-07 1.5e-05 26.3 1.3 1 23 307 329 307 329 0.98

6 8 0.00021 0.02 16.4 1.5 1 23 335 359 335 359 0.99

7 8 0.96 91 4.9 3.7 1 23 365 387 365 387 0.94

8 8 2e-06 0.00019 22.8 0.5 1 23 393 415 393 415 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0066	0.63	11.7	3.0	1	23	147	169	147	169	0.98
2	8	2.8e-06	0.00027	22.3	0.5	1	23	223	245	223	245	0.99
3	8	3.4e-05	0.0032	18.9	2.3	1	23	251	273	251	273	0.98
4	8	7.3e-07	6.9e-05	24.2	2.8	1	23	279	301	279	301	0.99
5	8	1.5e-07	1.5e-05	26.3	1.3	1	23	307	329	307	329	0.98
6	8	0.00021	0.02	16.4	1.5	1	23	335	359	335	359	0.99
7	8	0.96	91	4.9	3.7	1	23	365	387	365	387	0.94
8	8	2e-06	0.00019	22.8	0.5	1	23	393	415	393	415	0.98

Sequence Information

Coding Sequence: ATGGTTTATTATCAATCTACACCCTTGATTATAAAATCAGAACAACCTAGTCAGGCACAATTATGTGCACCTCTCAGAAATACCCAACATCATCATGAGCCTCAGCTGCAACATCCCAACTCAAATAGTTATAtacttaataatataaatataactaCAATGCAACAACatcaccaacaacaacaacaaatgtcTCACAACAACATTAATTCTACAAGTATTACAACAACAaatcatcaacaacaacaatatttaacaaatattaaaacagAATTATTACCACCGGGTATAACTTTATATGCCACCACACAACCTGCTTCCTTAACACCAACCTCCGTAACGCCAACACCAACATCCACCTCAGCAAATAATGTTAGCAGCAGTACACCTACATCAACGACCACCGTAGGTCGTAAGACCAATGCCAATAAGCCTCAGTTTAAATGTGAACAATGTGGTATGACTTTTGGTAGTAAATCGGCTCATACTTCTCATACAAAATCTCATATTAAAAATGGTGATTTAATGAGTGGAGCTAATTCCCCTCCTTTGGCGGGAGGAGCAGGAGGTGGAGTGGAGGTAAATGATGCTGGTGTTCCTTTGGGTATACCCAAGACGCCACAAATTAAGCCCAATGCAAATGCAGCCACAAATGGTGGTGATCCTTATCAGTGTAATGTCTGTCAGAAGACATTTGCTGTGCCTGCAAGACTGaTTCGTCATTATCGTACTCATACTGGCGAAAGACCCTTTGAATGTGAGTTTTGTCACAAACTCTTCAGTGTCAAAGAGAATCTTCAAGTTCATCGCCGCATACACACCAAAGAACGTCCCTATAAGTGTGATGTTTGTGGACGTGCTTTTGAACATTCAGGCAAATTGCATCGTCACATGCGCATTCATACAGGTGAACGACCGCATAAATGTTCGGTTTGCGATAAAACCTTCATACAATCCGGTCAATTGGTAATACATATGCGCACTCATACTGGTGAAAAACCCTATAAATGTCCCGTAGAAGGTTGTGGTAAAGGTTTTACTTGCTCTAAACAATTAAAAGTACATTCACGTACTCATACGGGAGAAAAACCTTATCATTGCGATATATGTTTCCGAGATTTTGGTTATAatcatgttttaaaattacatcGTGTACAACATTATGGTTCAAAGTGCTATAAGTGTACAATATGCGATGAAACATTTAAGAGTAAGAAAGAAATGGAAGCACATATTAAAGGTCATGCCAATGAAATGCCAGATGATGAAGAAGAGGCAAATGTTAATGTATCGACTTCCTCAGGAGCTGAAACTAATTCCGGACCAAATTCACCACAATCGCCCAGCTCAAGTATAGGTACCAGCACCAACAGCGCTACTACTACTAGTAATACAGCTAAGCCCCGCAagcaaaaaaaggaaaaattgaGCAGCAGTGCACCATCTATGGGACCTTTAAGTCCCGCTTCTCCAGGATCGCCCATATCCTCTTCCATGTCACCCTCTTCATCATATGCCTCGGGCTCTAGACTTTCGGCCGCCTCTCCCACATCTTCGGTGGCCTCTCCTACCTCTTTAAGCATGGAGGCTGATCATCATAGTCGTGATAGTGGTGTAGCCAGTGGTTCTATACCTTGCAATACTACCCGTCAATTAGCGGCAGTCTCCTTGGTAGATTTAAGTCATCAAGCTAGTTTCCCCATATCTGATGAAATGCCTACAGATTTAAGTGTTAGCCAAAATCATCATCACAACGAGCCAGCTAGCAATAATCAGCAACAAAACTTGACACAACTTAACTATCATTACCAAAGTTCCCCTTCGCCTCAAcatcaacaacagcagcagcatcaGTCCCACCAACAACAGTATCATTATCTAAATAATTCTGCAAGTCCATCACATAATACAGAAATACATCATGCTCCTTTAACCTCTCCCCAGCCGCATCATATACGTTATGAAACACCACAACCCACTATAAATCCTGCTCTTTTAGAAGCTGCCACTATAGCTAGTCGTCGGGAAGATGATGTCCAACAGGCAGCCATACAAATAATGCAATTACATCATTCTCAACAGAAATCGAATAAGCAAACACCAATTTATAGTGAATTACAGCAACAGTTACCGGCTCATCATAATATGCATCACAAACCACTGACAAATCATCACACGGATGTAGTCAAGTCCTTGGTAATGAATAATTTAACAGAGAATTTAATAGAACATTATAAGAGAGATGAAATGGTGAGACATGTGGGAGGAGGTTTGGCCAAGGGTTATGCACAGTACCGAAATTTGAGCCCTCCTTACATGACAATGAAATCATTTTACGTCAAATCTTTATCACCCGAAAACGAAATGATGTTAATGGCTGATCGTGATGTTATGACATTGCCTTTAAGAAAACGCAAACTCTATATGAGTGATTGCGGTGAAACGACCGATCATGATAACTCCAATGCTAATGCTAAAGATCTCAATCCTAAAGTCATGAGACATAGTTCGGTAATACAATTTGCCAAGGCCTCGTAG
Protein Sequence: MVYYQSTPLIIKSEQPSQAQLCAPLRNTQHHHEPQLQHPNSNSYILNNINITTMQQHHQQQQQMSHNNINSTSITTTNHQQQQYLTNIKTELLPPGITLYATTQPASLTPTSVTPTPTSTSANNVSSSTPTSTTTVGRKTNANKPQFKCEQCGMTFGSKSAHTSHTKSHIKNGDLMSGANSPPLAGGAGGGVEVNDAGVPLGIPKTPQIKPNANAATNGGDPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCDKTFIQSGQLVIHMRTHTGEKPYKCPVEGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKSKKEMEAHIKGHANEMPDDEEEANVNVSTSSGAETNSGPNSPQSPSSSIGTSTNSATTTSNTAKPRKQKKEKLSSSAPSMGPLSPASPGSPISSSMSPSSSYASGSRLSAASPTSSVASPTSLSMEADHHSRDSGVASGSIPCNTTRQLAAVSLVDLSHQASFPISDEMPTDLSVSQNHHHNEPASNNQQQNLTQLNYHYQSSPSPQHQQQQQHQSHQQQYHYLNNSASPSHNTEIHHAPLTSPQPHHIRYETPQPTINPALLEAATIASRREDDVQQAAIQIMQLHHSQQKSNKQTPIYSELQQQLPAHHNMHHKPLTNHHTDVVKSLVMNNLTENLIEHYKRDEMVRHVGGGLAKGYAQYRNLSPPYMTMKSFYVKSLSPENEMMLMADRDVMTLPLRKRKLYMSDCGETTDHDNSNANAKDLNPKVMRHSSVIQFAKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01194626; iTF_01259417;
90% Identity: -
80% Identity: -