Pter016718.1
Basic Information
- Insect
- Protophormia terraenovae
- Gene Symbol
- -
- Assembly
- GCA_951394005.1
- Location
- OX596075.1:23009351-23017882[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.045 4.3 9.1 1.2 1 23 308 331 308 331 0.93 2 13 0.018 1.7 10.3 1.2 2 23 408 430 407 430 0.95 3 13 0.0001 0.0097 17.4 0.6 1 23 1036 1058 1036 1058 0.98 4 13 9.7e-07 9.2e-05 23.8 0.4 1 23 1064 1086 1064 1086 0.98 5 13 0.003 0.28 12.8 1.6 2 23 1091 1113 1090 1113 0.96 6 13 0.0013 0.13 13.9 0.3 1 23 1120 1143 1120 1143 0.96 7 13 0.015 1.4 10.6 1.8 1 23 1282 1304 1282 1304 0.97 8 13 0.0025 0.24 13.0 0.8 1 23 1310 1332 1310 1332 0.97 9 13 0.0031 0.29 12.7 6.7 1 23 1338 1360 1338 1360 0.98 10 13 9.9e-06 0.00094 20.6 0.3 1 23 1366 1388 1366 1388 0.99 11 13 0.00016 0.016 16.7 4.1 1 23 1394 1416 1394 1416 0.98 12 13 3.5e-05 0.0033 18.9 2.2 1 23 1424 1446 1424 1446 0.99 13 13 0.00051 0.049 15.2 0.9 1 23 1452 1475 1452 1475 0.97
Sequence Information
- Coding Sequence
- ATGATCAACACTTTGCTGGAGCATGTGCCCATCAAAATGGAAGTTAAAGATGTAGATGAGGCTGAAGAAGAACAACGAGCCAATGAAGAAACAGAAAAAGAATTAACAAAAGACGATGTCCAAATGAAGGAAACAGATGAAGACTTAGAAGACgatgatgatgaagatgatgatgataTGGTTGATGAAGACGATGACGAAGATGAGGAGGAGGAGGAAGACGAAGAAGAGTCTGATACTGAAACAGATGCCTTAGAAATTGAAAAAGAGGCTATCATGTTAATAAGCAGTGATGAAGAAGCCGAATTGGAGGCTCAAAGAATACGTTTTCCTgataaaatatttcctaaaaaatcTTCACGCTGTTCTTCACGTAATAGTCAATGTAGTAATAATTCTTCGTCAATAGCCTCCAAAACTGAAACTAATACTACAAAGGTTACCACGCCACAGGAGGAAGACAAGAAACAAAGAATTTCCCCGCGCCTTAAGGCAACAGAGAATAATAAATCTTTAgagaatttaaataaagagaACAATACTtccagcagcaacaacaataattttaacACTAACAATACACTCtcacaaacaaaaaagaaaatagaaaataaaaaattggaaaataataaaactatggaaaataacaataaaaataaacagccacaacaacaacaacaagacaCTAGCAGCAAATGTTTGCTGGACAATAATAACACGGCAGAGGTCAATAACAAAACGTTGGAAAATAATcgtaatatagaaaatttacacaAATCTCCGGGTAATTTATCAGGCTCTAAAAGTCGTCGTGGCAGTAATAATTCTACATGCAGTGTAGCCTCTACTGTGGCCTCAGATTCTGCAGAAACTGAATCCTGTGGCAATATCTATGTCTTTAACTTGCAACAAAAACTTATATTCAATTGTGAATTTTGTGATTTAAAATATGGTGATTTGGACAATTTTTCCCGTCACCTCCATGAAGCCCATAAACTTTTCAATTTCGATGAAGATCCTGAAAAGGAAAATGCTCCCCGCAATTTGCGCAAAAGTCAACGTAATAATGTTACTAAAAATGCTGCCACTGTCAAAAAAGAACCTTTACAAACATTAGAAACTTTAGCAGAACCACCTGTTACTTTGCCTCTGTCTGTTTTGGCGGAACCTCTTAATTCATGTGGCAATGTTTTTTTGCTGAATCATCGTAAATTGTTTTTAGTATGCGGCTATTGTGAGTGTAAATATGCCAATTTggatttatttgaaaaacatttgagACAACAACATCGTATTTTTGAGGGTTGTCACAATGAGGTTAATGTAGTACCCAAGGTAGAGGTCAAAGAGGAGCTATACGTTATTGCGGAGGTAATGCCCCATCAGGATTTAATGAATCCTCAGGCCATGGTCGCTATACCAGCAGATATACCTTTAGATATAAGTATTAATCCGGAAAATGTGCATTTAACCGAAAAAGCTTTAGAGGAGGCCGTTGAGGAATGTAGTAAAGAGGCGAATAAAGAAGAAGAAACTACTCCTGATGTTCCAATAGCTGTTGAGACTTTGGAAACTACTTCTACGACAGCTAAAGTTGTTGAGGAGGTTTCTAGTGCAGCAGAGACTTTAGAATTACCTGTTGCTATGGAGGTGGAAGAGGATAAACCTGTAACGCCTAAGAAAACTAGAGTTAAAAGAAAATCTTCACCCATTAAGCCCTTAACTTCGCCTAATAAAAGACCTAAAAGGAATACaaggaataataaaaaaacaacagatGAGatcACCGTCCCAATTGTAGAAGACCAAGTTCCTGAAATTGAAAATGTTACTCCTGAAACAATAATTCCTTCtacagaaactgaaaaacctaCTGAAACTTCAGAGAGCGGAACTAAAGATACCAGCAAATCTAACAGATCTGTAGTCGAAGCTAAGGAAGCaactattgaaaaattaaatgaagCAAAGGAATCTAAAGAAACTAAGGAACCTAAAGATACTAAGGAACTTAAAGAAACTAAGGAACCTAAAGAAACTAAGGAACCTAGAGAAACTAAGGAATCTAAAGAAACGAAGAAACCTAAAGGAAGCAAGGAACCTAAAGAAACAAAAGAACCTAAAGAAACCAAGGAACTTAAAGTGTCAAATGAACCTAAAGTAACAAAGGAGCCTAAAGCAGCAAACCAACCTAAAGTAATAAAGGAACCTAAAGTAACAAAGGAACCTAAAGAAACCAAGGAACTTAAAGTGTCAAATGAACCTAAAGTAACAAATGAACCTAAAGTAACAAAGGAGCCTAAAGCAGCAAACCAACCTAAAGTAACAAAGGAAGCTAAAATAACGAAGGAACCTAATGAAGCGAAGAAACCTAAAGAAACAAAGGAATCTAAAGAAACTAAAGAACCAAAAGTAACAAAGGAACCTAATGAAACGAAGGAATCTAAAGAAACAAAGGAATCTAAAGAAACTAAAGAACCAAAAGTAACTAAGGAACCTAATGAAGCGAAGGAATCTAAAGAAACAAAGGAATCTAATGAAGCGAAGGAACCTAAAGAAACGAAGAAGTCCACAAGAACAGCAAAATCTAAGAAAACATCTACTGAAACTACATCTTCTCCAGAAACTAAAGAAACTACAGATACAAATAAATCCACAAACTCCGAAGATAAAGTCACAAACTccgaagaaataaataaagctactccaattgaaaatataaaacaacaaaaagaacGTAGAAAATCTAAAGTAATAGAGCCCAAGCAAGAAATACAAAAGAccgaagaaataaaaaaagctacACCAGTTGAAACCATAAAACAACTAAGAGGACGTAGAAAATCTAAACTCATGGAACCTAacaaagaaatacaaaaatcccaagaaatagaaaaagataCACCAGTTGaaactataaaacaacaaaaagaacTTAGAAAATCTAAAGTCGTAGAGCCCAACAAAGATATACAAACTAAACAGGTTGAAAAAACGTATGAAACCAGAAAATCTATAAAAGCTGTAGACACCTCAATACTACTAccaaaaccaacaacaaaatcGGTAGCAGAAACACAAgcagaaataaaatctaaaaagaaATACGAATGCAATTATTGCGGTAAGGACTTTGCGACGAATTGTGCGGTGCAGATACATGAACGCATACATACCGGTGAGAAACCATATGAATGTGATATTTGTCAATGGACCTTTCGATCGAAATCAAATCTTATGGCACATAGAGAATCGCATTTTGGGGAATCGAAATGTGATAGTTGTGATAAAACATATGCACTAAAAAATTCCCTACGAACacatataaaaaacaaacatttggGTGAGAAACATTATTTTACATGCGCCATTTGTGATCGAGATTTTACTCAAAAAGCCTATGTATACTCACATATTGAAAAAGAACATATGATGGTGGTTCAGAatgaagaagaagaaaacataCAAGATGATGACAAACTAGATGAAGAAGAACCTATGGAGGTGGTAGAAAAAGAGGTAGTGGAAAATGAAACTTTAACACTGCCAATGCCAATACCAACAAAAATTCAAACAGAAGCTTTGCCAGAAACAAAATTGCCCTCTGCAAATTTAAGTTATCAAGAGCCTGAAGATGATGATGAAGATCTTGCTGCTGATCCGGTCAATGATATTATGGCACAATTACAAAATGAAGAAGAACAAAACGCCATCACATTTACCATAAATACCTTACCCGATAGTGCAGCTTTAAAATTACCCAATAAATCTACAACACCTACCGAGTCTCTTCCCACTTCTCCACAAGATATTAAACCAACAATAATACAAATCGTTAAACGTTTCGTTTGTGATCAATGTCCACGATCATTTGAAAAACATATGCGTCTAATCGAACATAAACGTTTGCATACCGGTGAAAAACCCTATGAATGTGATGAATGCGGTAAACAATTTCGCATACGAATGCGTCTAAACGAACATAAACTACGACATTCCAaagaaaaaagatttaaatgtGAAATTTGTAATTTACCCTGTTGTACCAAACAGGATTTGAATTTGCATATGCGTCATCATGCCAAAGATCGTCGTTATCAATGTACCATGTGTACTAAGGCTTTCGTACGCGGTTCAGATTTAAAAATTCATGTGCGTGTTCATACAGGAGAGAAACCTTATGTATGCGATATTTGTCACAAATGTTTTCGCGCCAATCAAAATCTTATCGTACACAAAAAGTCTCATATGGGAGATGCTTCGAAAACCTTTCAATGTGAAATGTGTGATAAGAAATTTATGCGTAAAATTGATCGCAAAGTACACATGAGAACGCATACGGGAGAGAAACCTTTCAAATGTGAAATTTGTCAACGTGGTTATTCTTCAAGATTTAATGTAAGAACTCACATTGAAAGAGATCATATGGGCAGTATTAATGGTGAAACCAAACCCACTAAAGCAAAACCGGGACCCAAACCTAAAGCTTTAAGGGAGGAAttggaaaaacaaaagaaactaATAGTAGAATTACAAAATCAATTATTGCAACAAATAAAAACCGATGAAAAAATTATACCCTGTGATGTAGATATGCCACTACAAGACACTTTACAAGATTCCACTATAACACCTTCCTCGCCCATTAGCAGTACTACTAAAGATCCCATACAAAGTGCTTAtgaattgttaaataaattaaaaaccgCTAATACAACTACCTCTAAACCATTAACTATTATACCTTCACCTACACCTTTAGAGGAACCACCTTCCTTTACGAAAGGCAAAAAGACCACCTCAACATTACTACCTCTAACTGTTACACAAAAAATTGAACAACATTCACCAGCACCATCATCTTCCTCTTCCATATCCAACTCAGGTTCTACTACATCTTTATCATGTCTAACAACACCCTCACCACCCAAGACCACAGCCACAAAGGTAGTGTCACAAAAGACTTCATTGGGTATACAACAAGTATCGGTGACAGTTTCCATGCAAGTGGAAAATGTTACAACAACACCAAATCCTCCCACCACCCTTGAAAAAGAGAATGCTGGCATTTTGACAACAAGAACAAGTGATGCGGCGGCGACGACAACGACAACAGCTTCTAGTGTTAAGAAGGAAAGAAAAATCACAAGTTATTTTACAGTGGTGGGTCAAAAGGGTGAAGTTTAA
- Protein Sequence
- MINTLLEHVPIKMEVKDVDEAEEEQRANEETEKELTKDDVQMKETDEDLEDDDDEDDDDMVDEDDDEDEEEEEDEEESDTETDALEIEKEAIMLISSDEEAELEAQRIRFPDKIFPKKSSRCSSRNSQCSNNSSSIASKTETNTTKVTTPQEEDKKQRISPRLKATENNKSLENLNKENNTSSSNNNNFNTNNTLSQTKKKIENKKLENNKTMENNNKNKQPQQQQQDTSSKCLLDNNNTAEVNNKTLENNRNIENLHKSPGNLSGSKSRRGSNNSTCSVASTVASDSAETESCGNIYVFNLQQKLIFNCEFCDLKYGDLDNFSRHLHEAHKLFNFDEDPEKENAPRNLRKSQRNNVTKNAATVKKEPLQTLETLAEPPVTLPLSVLAEPLNSCGNVFLLNHRKLFLVCGYCECKYANLDLFEKHLRQQHRIFEGCHNEVNVVPKVEVKEELYVIAEVMPHQDLMNPQAMVAIPADIPLDISINPENVHLTEKALEEAVEECSKEANKEEETTPDVPIAVETLETTSTTAKVVEEVSSAAETLELPVAMEVEEDKPVTPKKTRVKRKSSPIKPLTSPNKRPKRNTRNNKKTTDEITVPIVEDQVPEIENVTPETIIPSTETEKPTETSESGTKDTSKSNRSVVEAKEATIEKLNEAKESKETKEPKDTKELKETKEPKETKEPRETKESKETKKPKGSKEPKETKEPKETKELKVSNEPKVTKEPKAANQPKVIKEPKVTKEPKETKELKVSNEPKVTNEPKVTKEPKAANQPKVTKEAKITKEPNEAKKPKETKESKETKEPKVTKEPNETKESKETKESKETKEPKVTKEPNEAKESKETKESNEAKEPKETKKSTRTAKSKKTSTETTSSPETKETTDTNKSTNSEDKVTNSEEINKATPIENIKQQKERRKSKVIEPKQEIQKTEEIKKATPVETIKQLRGRRKSKLMEPNKEIQKSQEIEKDTPVETIKQQKELRKSKVVEPNKDIQTKQVEKTYETRKSIKAVDTSILLPKPTTKSVAETQAEIKSKKKYECNYCGKDFATNCAVQIHERIHTGEKPYECDICQWTFRSKSNLMAHRESHFGESKCDSCDKTYALKNSLRTHIKNKHLGEKHYFTCAICDRDFTQKAYVYSHIEKEHMMVVQNEEEENIQDDDKLDEEEPMEVVEKEVVENETLTLPMPIPTKIQTEALPETKLPSANLSYQEPEDDDEDLAADPVNDIMAQLQNEEEQNAITFTINTLPDSAALKLPNKSTTPTESLPTSPQDIKPTIIQIVKRFVCDQCPRSFEKHMRLIEHKRLHTGEKPYECDECGKQFRIRMRLNEHKLRHSKEKRFKCEICNLPCCTKQDLNLHMRHHAKDRRYQCTMCTKAFVRGSDLKIHVRVHTGEKPYVCDICHKCFRANQNLIVHKKSHMGDASKTFQCEMCDKKFMRKIDRKVHMRTHTGEKPFKCEICQRGYSSRFNVRTHIERDHMGSINGETKPTKAKPGPKPKALREELEKQKKLIVELQNQLLQQIKTDEKIIPCDVDMPLQDTLQDSTITPSSPISSTTKDPIQSAYELLNKLKTANTTTSKPLTIIPSPTPLEEPPSFTKGKKTTSTLLPLTVTQKIEQHSPAPSSSSSISNSGSTTSLSCLTTPSPPKTTATKVVSQKTSLGIQQVSVTVSMQVENVTTTPNPPTTLEKENAGILTTRTSDAAATTTTTASSVKKERKITSYFTVVGQKGEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01259393;
- 90% Identity
- -
- 80% Identity
- -