Pter022292.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Protophormia terraenovae
Gene Symbol
Zbtb41
Assembly
GCA_951394005.1
Location
OX596076.1:5887884-5890659[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0014 0.13 13.8 0.3 2 23 177 199 176 199 0.93
2 16 0.016 1.5 10.5 5.4 1 23 205 227 205 227 0.94
3 16 0.0002 0.019 16.5 0.6 1 20 233 252 233 253 0.97
4 16 1.1e-07 1e-05 26.7 1.4 1 23 261 283 261 283 0.98
5 16 0.13 12 7.7 5.4 1 23 289 311 289 311 0.95
6 16 0.0058 0.55 11.9 0.5 1 23 316 339 316 339 0.95
7 16 0.0015 0.14 13.7 2.2 1 23 345 367 345 367 0.98
8 16 0.021 2 10.1 2.2 1 23 373 396 373 396 0.98
9 16 0.00039 0.037 15.6 2.6 2 23 520 542 519 542 0.95
10 16 0.0031 0.3 12.7 2.5 1 23 548 570 548 570 0.98
11 16 6.5e-07 6.2e-05 24.3 0.5 1 23 576 598 576 598 0.98
12 16 6.7e-07 6.3e-05 24.3 1.6 1 23 604 626 604 626 0.96
13 16 0.77 73 5.2 7.6 1 23 632 654 632 654 0.96
14 16 0.00055 0.052 15.1 0.5 1 23 660 682 660 682 0.98
15 16 0.00041 0.039 15.5 5.7 1 23 688 710 688 710 0.98
16 16 1.4e-05 0.0014 20.1 1.7 1 23 716 739 716 739 0.97

Sequence Information

Coding Sequence
ATGGATCCCTTGCATGATTTATGTTTAACCTGTCTTTCCAAGCCTTTGCTGGCTCATAATCTTAATgatattattttagaaaatcttaaaatattggAAATCCTCAAAAAGCTAATTCCTAATCTCTTGGAAAATCCAGAATTACCGTTGCCTAATTGTATATGTAATGAATGTGTGGATAAACTTGTTATAGCTTATACATTTCAAAAGCAATGTTTAAATTCAGTCgacaaaatatataattcatggaaagaaaattttaaggaaaaagtGGTTAAACAGGAAATAGAAGAACTGGTATTGGATAATTTTGTGCTTAATGAAGATATGAATTCAAGAGGAATTCATAACGAAAAAGAAATTAGCATAGATTCTCTGTCAatagataaagatgataaaccaAAGGCATTTGCTTATAATTCTACGGATTCATTTGCTGAGTGTAAAGGCGAAATATTTGAATATAGTGAAAATGAAGAAGTTAAATTGGAAAATAATAGTGAAAGTACACAACTTAATGCCCGAAATCAAtgcaaactttgtaaaaaagtatttaaactACCAAAAGGTTTAGCATTGCATATGGTTCAAGCTCATTTGCATAGATCTTTGTATCAATGTAAAAAATGCAATAAGGGTTTCAATATGAAAACAGCTTATAAAGCTCATTGTAATAAACACATGGGCATAAAAACTTTTAAGTGTGAACACTGCAACAAAGCTTTTGCTTCTATAACAACTTTAAAACAGCATTTAGTTTGTCATTCCGATGAAACACCATTTTCATGTACAATTTGTGGCAAAGCCTTTAATCGATCGTCTACTTTAAGACAACATTTACAGCGTCATAACAGTGAAAGACCCTACAAATGTGAAAAATGTTCGAAGACTTTTAAATGTATTGCTAATTATTCAAAACATCGTTCATTACATGCTAAAAAGCGCTATAGATGTAAATTTTGTGATTCACTTTTTATCACAGCGGAATTATTGCAGCAACATCAAGCGCTCAAACATGCTGAAGAGAAGCCTTTTAAATGTAGCCAATGTGATCAAGGCTTTACAACCCGCAACAATAAAGATCGCCATGAGAGGTTACATACTGGAGTAAGACCCTTTAGGTGTGAACTTTgttataaagaatattttaaaattgctgaGTTTAAAATCCATATGAAACGAAAGCATAAGAAAAAGTATGACGAGCTGGAGGAGGAGAACGAAGAAAGTGAAAATATAATAGATTATGAAACTTGTTCTTCAGAAATGAATACGAGagattatttaaatgaatatcaAGATTTTGATTTAGAAACAACGCAAGAAAACTCCTCAAAAGATAATTTCACAGATAACGAAGTATCTAACGAACTAATGATAAATAAAGCTTCAATTGATAGTAAAGATGATTTGAAAATCCTTGTGAAAAATGTGAAAGATAAAGATGATAtattgagcgaaaaaataaacaataaaaacagCCCAGAAATATTGCCCAAAAACGAAAACAATAACGAATTAAATAACGAGGTAACAACcacaacaaataaattacaagAATGTAAATtatgtaacaaaaaatttaaacaggCTCATGGTTTAAATTTACATTTGGCTAAAAAACATTTTCGTAAATATCCATTTCAATGTGAGACTTGCAATAAAGGGTTTATGGCAGAAGAACACTATATAAAACATCGAAATCGACATTtgggtataaaaacttttaagtGTGAACAATGTGGCAAAGCTTTTGATTCGAATAGCACCTTAAATCAACATTTAATTTCCCACTCTAAAGAGACACCGTATTTATGTACAACATGTGGTAAAAGTTTTAATCGTTCTGGTACCTTAAGACAACATATGTTACGTCATAGTGATGCTACTCCCTTTCAATGTTCTgaatgtccgaaaaaatttaaatgtcatTCGGATCTTCTTTGTCATATGACAATTCATAAAgcagaaaaaagttatgagtgTGAAATATGTGGTAAACGTTTGGCCACTAGTACATCCATGGTACATCACAAACTAGTACATTCAGGCGAAAAACCCTTTAAATGTGATTTTTGTGATAAAAGctttaattCTTCATCAAATATGAAATGTCATCGAAGAATACATACGGGCGAAAAACCATATAACTGTCCATATTGTGATAAAACATTTCGACAAAGTAATGATCGTAATAAACATGCGAAACGTGTGCATGCAAAAGAATGGACTGCCGCTAATGGGAAGTTGAGTGAAGAAGAGTataaCTTATAg
Protein Sequence
MDPLHDLCLTCLSKPLLAHNLNDIILENLKILEILKKLIPNLLENPELPLPNCICNECVDKLVIAYTFQKQCLNSVDKIYNSWKENFKEKVVKQEIEELVLDNFVLNEDMNSRGIHNEKEISIDSLSIDKDDKPKAFAYNSTDSFAECKGEIFEYSENEEVKLENNSESTQLNARNQCKLCKKVFKLPKGLALHMVQAHLHRSLYQCKKCNKGFNMKTAYKAHCNKHMGIKTFKCEHCNKAFASITTLKQHLVCHSDETPFSCTICGKAFNRSSTLRQHLQRHNSERPYKCEKCSKTFKCIANYSKHRSLHAKKRYRCKFCDSLFITAELLQQHQALKHAEEKPFKCSQCDQGFTTRNNKDRHERLHTGVRPFRCELCYKEYFKIAEFKIHMKRKHKKKYDELEEENEESENIIDYETCSSEMNTRDYLNEYQDFDLETTQENSSKDNFTDNEVSNELMINKASIDSKDDLKILVKNVKDKDDILSEKINNKNSPEILPKNENNNELNNEVTTTTNKLQECKLCNKKFKQAHGLNLHLAKKHFRKYPFQCETCNKGFMAEEHYIKHRNRHLGIKTFKCEQCGKAFDSNSTLNQHLISHSKETPYLCTTCGKSFNRSGTLRQHMLRHSDATPFQCSECPKKFKCHSDLLCHMTIHKAEKSYECEICGKRLATSTSMVHHKLVHSGEKPFKCDFCDKSFNSSSNMKCHRRIHTGEKPYNCPYCDKTFRQSNDRNKHAKRVHAKEWTAANGKLSEEEYNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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