Basic Information

Insect: Protophormia terraenovae
Gene Symbol: ZNF275
Assembly: GCA_951394005.1
Location: OX596076.1:5900057-5903377[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0005 0.048 15.2 0.4 1 23 193 215 193 215 0.97

2 15 1.3e-05 0.0013 20.2 0.2 1 23 221 243 221 243 0.98

3 15 1.1e-06 0.0001 23.6 0.2 1 23 293 315 293 315 0.98

4 15 7.3e-06 0.0007 21.0 0.5 1 23 423 445 423 445 0.96

5 15 0.2 19 7.0 1.6 1 23 451 473 451 473 0.92

6 15 5.2e-06 0.00049 21.5 0.3 1 23 490 512 490 512 0.98

7 15 0.024 2.3 9.9 0.5 1 23 521 544 521 544 0.95

8 15 0.00084 0.08 14.5 4.9 1 23 550 572 550 572 0.98

9 15 0.00041 0.039 15.5 0.4 2 23 579 600 578 600 0.97

10 15 2.8e-08 2.7e-06 28.6 0.7 1 23 606 628 606 628 0.96

11 15 0.0023 0.22 13.1 1.3 1 23 634 656 634 656 0.98

12 15 5.1e-05 0.0048 18.4 1.6 1 23 662 684 662 684 0.96

13 15 1.5e-05 0.0014 20.0 3.2 1 23 690 712 690 712 0.99

14 15 2.7e-06 0.00026 22.4 0.7 1 23 718 740 718 740 0.99

15 15 9.3e-05 0.0089 17.5 1.4 1 23 746 768 746 768 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0005	0.048	15.2	0.4	1	23	193	215	193	215	0.97
2	15	1.3e-05	0.0013	20.2	0.2	1	23	221	243	221	243	0.98
3	15	1.1e-06	0.0001	23.6	0.2	1	23	293	315	293	315	0.98
4	15	7.3e-06	0.0007	21.0	0.5	1	23	423	445	423	445	0.96
5	15	0.2	19	7.0	1.6	1	23	451	473	451	473	0.92
6	15	5.2e-06	0.00049	21.5	0.3	1	23	490	512	490	512	0.98
7	15	0.024	2.3	9.9	0.5	1	23	521	544	521	544	0.95
8	15	0.00084	0.08	14.5	4.9	1	23	550	572	550	572	0.98
9	15	0.00041	0.039	15.5	0.4	2	23	579	600	578	600	0.97
10	15	2.8e-08	2.7e-06	28.6	0.7	1	23	606	628	606	628	0.96
11	15	0.0023	0.22	13.1	1.3	1	23	634	656	634	656	0.98
12	15	5.1e-05	0.0048	18.4	1.6	1	23	662	684	662	684	0.96
13	15	1.5e-05	0.0014	20.0	3.2	1	23	690	712	690	712	0.99
14	15	2.7e-06	0.00026	22.4	0.7	1	23	718	740	718	740	0.99
15	15	9.3e-05	0.0089	17.5	1.4	1	23	746	768	746	768	0.97

Sequence Information

Coding Sequence: atgtcgTCTAGTGATTTAGCTTCCAAATGCCGCACTTGCCTAAGTGCCTCTAATGTTTATCACCAACTCTTCGATTATGTGgaggaaaattataaaattcttgaaatGTTAGATGGTATAGTGCCCCAAATTGATATTAAGACCTCCTCGCAATTTTCCACTTTGGTTTGTCAGACTTGTGTGGATAAATTGTTAACCGGCTATAAATTTCAACAATTATGTATCGAAACCAATAATCGTTTACATGATTTATTGGGCCTGGCGGTGTTTGAGACAGAACcgaaattggaaaaaattttagatcCTTTGACGGGGGAGGCAAGCTTTAAGATGAAAGAAGAAATCGAGGAAGAACAGTTTGAAAGTGAAATACAACCCAGCGATCTTTTAGAGACAATGGGTTCGGATAATGATAATGATTGGGGACCGGAAGATGGGGGTGGTGGCGGCGATGGGAGTGATACTGATTCGAGCAATGAAAAACTTTCCGTTTTAAAAGAAAGATCGGTCAAAAAATCTTCCTTAAAAATGAACATTATGGAAAAACCTTCCAAATTAAATCGCCGTAAAGGTAATTTTCCTTGCTCTGAATGTACTAAAGTGTTTAGTAGCATTAATCGTCTAAAACAGCATACAGCTATACATGAGAGAAAGCGGGCTTTCCCATGTGAAATTTGCAATACTAGTTTTACGGcagaaaagttattaaaagctCATATGCTAACACATTCTAATGGAGATGATTCTACAAAAGATTCAGAGCTTAATGAGTTAAAGGAAATTAAAGTGGTTAATGAAGAAAATAAGTCCGAAGAAAATCAAAATGACCAACAAGATGAAAAAGAAGAAATCCAAGATTCTAAGGAACTGCTCATATTTCAATGTCCCGACTGTCCCAAAGTTTTTGAGAAAAAGGCTTCTTTATCGGCCCACTACAAAGTGCACAAGaaatatagcattaaaaataaaaaattggaacAAAGTGAAGAGGGAAATTCGGCAAATAATAAGGAGAAAGCTAATGATAAGGTTATTGTTAAGGAGGAAATTGAAATTACACCACAAATATTTGAAGAACCCATGGATGATGTTGATAATGAGGGCGCTGATTGGTTTAATAATGATTATGAGGAATCAGACAATGATTCGGATAAGAATATTTTTGCCAAACCCCGAgcaaaagaaactaaaaaaaatattgatttcattgaCACCGGCGTAGGGGAAATAGAAAaACCTAATAGCAGCAATAAAAGAAGTGGTCAATTTCCTTGCAACATGTGCGGCAAAGTATTCGATCGTCCTTATCGTCTAAAACGTCATAGTTCCGTTCATTCTCCCAGCAGACCACATGAATGTGAAATCTGTAAATATCGTTTTGCCACCGTCAACATTCTTAAGTCTCATTTATTTCAGCATGAGAATGAGACTGGTTTATTTCTTAGCTTACAATCTCGTCCGGAAGGCTTTAAATGTCCCGATTGTCCCAGGCGTTTCGAAAAACAAGCCTCTCTTTCGGCTCATCGTCAAATACACACACGTAATGCTACCGAAGCCAATTATCCTTGTATGGTCTGCCAACGCAATTTCATGTCTGTAAGATCTTTAACTGAACATATCACCAATAAACATCCCGAAGTGGAGAAACACAAATGTGATCAATGTGACAAAACATTCGTTTTACATGCCCATTTAGTGGAACATTTAAATCGTCATAAAGGCAATCGAAATCTAGTGTGTCTTGTATGTGAAAAAGAATTTGGCTATACGAATACTTTAAAAGAACACATGCGAACCCATAGCGGTGAAAGTCCTTATTTATGTCCTCAATGTGGTAAAACATTCCGCAGTGCAAGTAATTTACGCCAGCATATGGAAAGACATACAGGTTTGAAGAAGTACCAGTGTCCAGAGTGTCCAAGCCGTTTTAATTGTCGTTCAGATTTGATAAAACATGCCTCTACTCATTCGAATGCTAAGCCGCATGTTTGTGATATATGTGGTTCCCGATTTACGCGAGCGTACTCTTTACAAAAACACAAGCTGCTACATTCGGGAGAAAGACCTTTCAAGTGTGATCAGTGCAATATGActtTTGCTATAGTTTATCATCTACGACGACACATGCGTACTCATACTGGTGAGAAACCTTATAAATGTAAATACTGTGAACGGGCTTATGCCGAAAGTGGCGACTTGACTAAACATTTAAGAACACATGTAGGCGAAAATACCTATATGTGTGATCAATGTCCTATGGCCTTTAAATATCAAGCCGAATTAAGGCATCATCAATCGCAGCATTATAAAATGGCACAAAAACTCTTACAACAGGCACAAAAAATGTCCGAAGAAGCTCAAGAACAAACAATAGAGCAAGAGCAGCAACAACCACAACAGCAACCACTTGAGCAGCAACAACAAACTCAACTAACCTTACAAGATCAGCAGCAGCATCCgcagcagcaacaacataatcaacaattattaaaaaatgaacaTCTACAAAATTTACCATCATTGTCTATATCACGTTATCAGCAGCAAATTCCTTTAATAGATCATAGACAACAATTAGCCGAACAAACACAACAACGTCAGGGGCAAATGGAAGATGTTGTAGCACGAACACAGCAACAAGACAATTTAGATTTTAAAGAATCTcagtaa
Protein Sequence: MSSSDLASKCRTCLSASNVYHQLFDYVEENYKILEMLDGIVPQIDIKTSSQFSTLVCQTCVDKLLTGYKFQQLCIETNNRLHDLLGLAVFETEPKLEKILDPLTGEASFKMKEEIEEEQFESEIQPSDLLETMGSDNDNDWGPEDGGGGGDGSDTDSSNEKLSVLKERSVKKSSLKMNIMEKPSKLNRRKGNFPCSECTKVFSSINRLKQHTAIHERKRAFPCEICNTSFTAEKLLKAHMLTHSNGDDSTKDSELNELKEIKVVNEENKSEENQNDQQDEKEEIQDSKELLIFQCPDCPKVFEKKASLSAHYKVHKKYSIKNKKLEQSEEGNSANNKEKANDKVIVKEEIEITPQIFEEPMDDVDNEGADWFNNDYEESDNDSDKNIFAKPRAKETKKNIDFIDTGVGEIEKPNSSNKRSGQFPCNMCGKVFDRPYRLKRHSSVHSPSRPHECEICKYRFATVNILKSHLFQHENETGLFLSLQSRPEGFKCPDCPRRFEKQASLSAHRQIHTRNATEANYPCMVCQRNFMSVRSLTEHITNKHPEVEKHKCDQCDKTFVLHAHLVEHLNRHKGNRNLVCLVCEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFRSASNLRQHMERHTGLKKYQCPECPSRFNCRSDLIKHASTHSNAKPHVCDICGSRFTRAYSLQKHKLLHSGERPFKCDQCNMTFAIVYHLRRHMRTHTGEKPYKCKYCERAYAESGDLTKHLRTHVGENTYMCDQCPMAFKYQAELRHHQSQHYKMAQKLLQQAQKMSEEAQEQTIEQEQQQPQQQPLEQQQQTQLTLQDQQQHPQQQQHNQQLLKNEHLQNLPSLSISRYQQQIPLIDHRQQLAEQTQQRQGQMEDVVARTQQQDNLDFKESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259358;
90% Identity: iTF_01259358;
80% Identity: -