Ppyg017618.1
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000196.1:283093-285576[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.011 1.1e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 20 3.1e-07 0.0032 17.6 15.9 3 19 186 202 185 202 0.95 4 20 1.5e-06 0.015 15.5 12.7 1 19 237 255 237 255 0.91 5 20 0.87 8.9e+03 -3.0 1.9 6 10 280 284 279 284 0.87 6 20 8.1e-10 8.3e-06 25.9 11.3 1 19 290 308 290 308 0.99 7 20 0.4 4.1e+03 -1.9 0.7 5 10 332 337 332 339 0.91 8 20 1e-05 0.1 12.8 19.8 3 19 345 361 337 361 0.86 9 20 2 2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 20 6.7e-05 0.68 10.2 20.3 1 18 395 412 395 413 0.97 11 20 8e-10 8.2e-06 25.9 11.8 1 18 422 439 422 440 0.97 12 20 0.00021 2.1 8.6 6.4 9 19 488 498 486 498 0.89 13 20 0.012 1.3e+02 2.9 6.6 4 12 510 518 508 518 0.90 14 20 0.41 4.2e+03 -1.9 3.4 14 18 547 551 547 552 0.85 15 20 0.8 8.2e+03 -2.8 3.1 8 12 568 572 567 579 0.64 16 20 5.3e-06 0.055 13.7 4.8 1 11 588 598 588 599 0.97 17 20 2 2e+04 -7.4 4.2 6 10 616 620 613 620 0.66 18 20 0.00017 1.7 8.9 13.9 3 18 629 645 628 646 0.86 19 20 1.1e-05 0.12 12.6 13.0 1 16 687 701 687 706 0.89 20 20 2 2e+04 -4.1 1.3 6 10 736 740 735 740 0.85
Sequence Information
- Coding Sequence
- ATGGCACGAAGGTATAGGGATGCTGCTGCAAAATTGCAACAAAATGTTCAAAAACATTTGAAAGAAATGAAGGATCTGTCATCTTCTGAGGATGAGGATCCTTGTGAAAGTAGCGTCTTAGAGGGAGTGTTCCAAAGCTACTGGCGCGGTGGTGGTGACACTCACATGCTGAACAGAACCAAAAACCTCTTAGAAGAAGTTATTAGTGGCCGCTCAGTCACTTGCCTCATATGTATAGCGTCAATCAAAAGAACACACGCCATCTGGACCTGTCACCATTGCTTTTCCTATTTCCATATTTCGTGCATACAAAAATGGTCAAATGACAGCATTAGCTTACGAAGCGAGCAATCCCAGGCTCCAGTAGCTGTGTTTAAACAACAAAAAATTGAGTGGTGCTGTCCTAAATGTAGACAGTCATATTCTAAGGAGGAAATACCGCGAAAATATAGATGTTTTTGTGGGAAAACTGATGATCCACCATACCACCCTTGGCTTATTCCTCACACTTGTGGAGAGGTTTGCGGAAAACTTCTCTCAGCTGGAGAAAACTGTAAACATAAGTGCTTGCTTCTATGCCACCCTGGTCCTTGTCCACCTTGCCCTCAAACTGTCAACCGAGTTTGTTTTTGTGAGAAGGAAAGCAAGAAAGTGAGATGTAGCGCCGCCAAATGGTCTTGTGGACAAATTTGTAAAAGGATGTTGACATGTGATACCCACAAATGTGAAAAAGTATGTCATGAAAATTCCTGTCCCCCATGCAGTTATACTAGTATACAGGCATGCAAATGCGGTGCGCAAAAAGCCAAAAGACCTTGTAACCAACCACATTGGCAGTGTGAAAAGCCATGTAATAAATCTTATTCCTGTGGGTACCATAAATGTGATAAAATCTGCCATTCTGGTGATTGTGGAGTCTGTCCCAAATCTGGAATGTCTTCATGTCCATGTGGAGCCAATAAACGCTATGTCCAATGTCCAGATATTATTGAAACCTGCAAAAGTACTTGCGGCAAGAACCATAAAGATTGTGAACATAGCTGCCCAGAAAAATGTCATAATGGACCGTGCCCACCTTGCCAAGTGTTAACAGAAAAGAAATGCTATTGCTCAACTCATTCGAGATCCTTACCATGCAGCAAAGAGTATAAATGTGAAACAAAATGTAGAGGTGTAAGAGCTTGTGGCAAACATGGATGTGGACGAAAATGTTGTAACGGAAACTGCCCTCCATGTGAGAAAATATGTGACAAACCTCTTCAATGTGGAAGACATAAATGCACAAATATCTGCCATCTTGGACCATGCTACCCATGCAATAGGGAATCAAAAGTCACTTGTAGATGCAAAGAAACATACATAACAGTACCATGTGGTAGAGAAAGACAAACTAAACCGCCAAAGTGCAGCTTACCTTGCAAAATTAAATACAAATGTGGTCATAGTGACGAAAACAAGCACTCCTGCCATTTCGGGGACTGTCCGCCTTGCAAAGCAATTTGTAATAAAGCATATCCAAAGTGTGATCACCAATGTAAAGCGGTGTGTCATGAATATGTGGCAGTGCTGTTCAAACAGGTTGAAAAGCCTGCTACGCCTTGGGAGGTGCAACCCCCAAAAACTAAGATAATGACCTTGGAGTGCCCACCGTGCGACACGCCAATACAAATAATTTGTTTTGGTGAACATGAGACTGATGATCAACCTTGTCATTCCGCATGTCGGAGGCCTTGCGGTAGACAATGCGGGAAACCGTTAGCTTGTGGAAATCACAAATGCTCTTTACTCTGTCATCTCCACTCACCCGACCCAGAATATCCAAACGTGCCTTCCAGTTGTAAGCAATGTGAAAGAGAATGTTTAGTTCCTCGTCCCGAAAAATGTACACACAAATGTTCTATTAGAGCGTGTCATCCAGGTAAGTGTCCTCCGTGTGAAATATTAGAACGGTTAGCATGCCATTGCGGCGTTACAGAGATTTACTTGCGTTGCCGAGAAATATCTGTAGCTAATGAGGAAATGCTGTCATGTAAGCAACAATGTCCAAAAATCTTGGATTGTGGACACCGCTGCCGGAACACTTGCCATCCAGGTGCTTGCGGCAAGCAAATTTGCACCAAAAAAACCAAAGCACATTGCCCATGTGGTAACCTAAAAAAGGAAGCTCCTTGCAATTCGGTTCGAAATGGAGACGCAAAAGTCCAATGTGACGAAACCTGCGAAGCGAAGAAGATTGCTATCAAATTGGAACAGGAGAAAGAAAAACAGAGGCAAAAAGAGTTGGAGGAAGAAAGGAATCGCAAGGAGTTGGCGGAATATGAGTGGAAGTTGAGTGGTAAGAAAAAGAAATATAAGGAGAAAAAGACGGTTGTCAACAAGGATGATAGAGGTTTGTTGAGGAAGTATTGGGTACCAATATTATCATTTCTAGTTTTAATGCTAGCTGGTTTTTACTATATATTTTATGTAGGAGATGTCAATTAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEDPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEVISGRSVTCLICIASIKRTHAIWTCHHCFSYFHISCIQKWSNDSISLRSEQSQAPVAVFKQQKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPPYHPWLIPHTCGEVCGKLLSAGENCKHKCLLLCHPGPCPPCPQTVNRVCFCEKESKKVRCSAAKWSCGQICKRMLTCDTHKCEKVCHENSCPPCSYTSIQACKCGAQKAKRPCNQPHWQCEKPCNKSYSCGYHKCDKICHSGDCGVCPKSGMSSCPCGANKRYVQCPDIIETCKSTCGKNHKDCEHSCPEKCHNGPCPPCQVLTEKKCYCSTHSRSLPCSKEYKCETKCRGVRACGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCTNICHLGPCYPCNRESKVTCRCKETYITVPCGRERQTKPPKCSLPCKIKYKCGHSDENKHSCHFGDCPPCKAICNKAYPKCDHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLECPPCDTPIQIICFGEHETDDQPCHSACRRPCGRQCGKPLACGNHKCSLLCHLHSPDPEYPNVPSSCKQCERECLVPRPEKCTHKCSIRACHPGKCPPCEILERLACHCGVTEIYLRCREISVANEEMLSCKQQCPKILDCGHRCRNTCHPGACGKQICTKKTKAHCPCGNLKKEAPCNSVRNGDAKVQCDETCEAKKIAIKLEQEKEKQRQKELEEERNRKELAEYEWKLSGKKKKYKEKKTVVNKDDRGLLRKYWVPILSFLVLMLAGFYYIFYVGDVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -