Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000178.1:468636-475102[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.2e-06 0.00024 21.5 0.3 1 23 357 379 357 379 0.97

2 7 0.00037 0.022 15.4 0.3 1 23 385 407 385 407 0.95

3 7 0.00015 0.0088 16.6 3.0 1 23 413 435 413 435 0.98

4 7 0.00024 0.014 16.0 4.1 1 23 441 463 441 463 0.99

5 7 8.2 4.8e+02 1.7 0.2 14 23 486 495 482 495 0.84

6 7 2.6e-05 0.0015 19.1 7.2 1 23 501 523 501 523 0.98

7 7 4.4e-05 0.0026 18.3 0.4 1 23 529 552 529 552 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.2e-06	0.00024	21.5	0.3	1	23	357	379	357	379	0.97
2	7	0.00037	0.022	15.4	0.3	1	23	385	407	385	407	0.95
3	7	0.00015	0.0088	16.6	3.0	1	23	413	435	413	435	0.98
4	7	0.00024	0.014	16.0	4.1	1	23	441	463	441	463	0.99
5	7	8.2	4.8e+02	1.7	0.2	14	23	486	495	482	495	0.84
6	7	2.6e-05	0.0015	19.1	7.2	1	23	501	523	501	523	0.98
7	7	4.4e-05	0.0026	18.3	0.4	1	23	529	552	529	552	0.95

Sequence Information

Coding Sequence: ATGTTGGATCCAATGGATACAATCGACATGAAATCATGTCGTATATGCTTGACAAATAAAAAACCACTATGCCCTTTATTCAGATATAAGTTGTCTGGTAATTATGCTGAAATGCTCACAGCTATTGCTGATGTGAAGGTTTCCTCTAATGATGGCTTACCAGAAAAAATCTGCCTTAAATGCTGCACAACATTGGAAAAGGCGTACCTACTTAAAACAGTGGCTGAGAGATCTGAAAAAAAGCTGAGAAAGATATTAGCAAGAGAAAAAGATAATAAACCAACCAAAAAAATTGCATTTGATTCTTTCACTGATATTAAAAGTGAGATTGGGCCTTTGACTATAAAACCTGAACCAAAATGGGAAATGGAAATAGAAGTTCCAGAAGGAAGTAAGCCTGTTGAAACAATGGATGGTAAAGACATTGTTATAGCTAATACAGTAATAAGAAAGGTTGATCCTAATGCGGAAGAGGTACATGAAATTGATTGTTCAGATGATGTACAATTAACATGGAGATCATCAAGGACTAATTATGTTCCTAAAACTGATCCAGATgctgaatatttggatgatgatgtgtttcaagatgatgatgatgatgattatgtaccacctgttgaaaagcctaaaacgaaatttaagaaaccaaaactctctgatattaaggtgttcaaaggcaaaactattgtgagaaaagtaaaagtgctgaagaaatttaaagatgaatacaacactgattcaggtagatccagagatgaaaataaaacacgatctacgacaatcacttgctatccaattttaaaaaatggtacaagaggctcacctattcttttgaggagaccgaaagatgcaacggtattgaaggttcactctggatataagtctaaaactccatcatcttcatcctcatcagagccatctggcaaagttgtacgcagagaaaagccagtaagaatggtaaggagtgcagttgccaaacaaagagagaaactagtgtgtccagtatgtggaatactcacctatacattgggcaatcatatagccacacatcaagaaaagaaaagatacacatgcgctcaatgtccaagatcgtttgcccaaaagagcaatttattggtccatgccaaacaacatactggaattaaagatcacatttgtgaaatatgtggtgctggattttatagccaaaaatctttggttagacacaacttaattcataaaggtgaaagaccattttcctgcaatttatgtacaaagagatttattgctCGTTGTGATCTGAATCGGCACCTGCGCATACATTCGGGGTACAAACCCTTCAAATGTAACACTTGCACAATGTCGTTCAACGCGAAACATCAGTTGCAAAACCACGAGAGAATGCACACCGGGGAGCGGCCGTACACATGTCAGGTGCGTGGTACTTTACGATCTCTTCTCACGTTCCAGATGGCTGGTCTGCGCCGCCATATGGCGATACATACTGGCGACAAACGGTTCAACTGTGACTTCTGCAATAAAAAGTTCACACAAAGCCACCATCTGCAGAACCACTTGCTTACCCACACTGGTGATAGGCCCTATACTTGCGAGGTGTGCAACGTTGCTTTCAGTTACAAAGTAAACTTAAACAACCACGTCTTCAAAGTGCATGGCATTAATCTTAAATTCAAGTCCATCCATAATGTGACTGAAGATATTTTGCGACGCGAGATGGGCATGATGAATGAGACAAGAGTCGCAATATCCCATATCATACCGCAGTTGGGAGAAGTGCCAACGCCAGCCGCTCACGAAACTGTACTGTCGCTATCTTGA
Protein Sequence: MLDPMDTIDMKSCRICLTNKKPLCPLFRYKLSGNYAEMLTAIADVKVSSNDGLPEKICLKCCTTLEKAYLLKTVAERSEKKLRKILAREKDNKPTKKIAFDSFTDIKSEIGPLTIKPEPKWEMEIEVPEGSKPVETMDGKDIVIANTVIRKVDPNAEEVHEIDCSDDVQLTWRSSRTNYVPKTDPDAEYLDDDVFQDDDDDDYVPPVEKPKTKFKKPKLSDIKVFKGKTIVRKVKVLKKFKDEYNTDSGRSRDENKTRSTTITCYPILKNGTRGSPILLRRPKDATVLKVHSGYKSKTPSSSSSSEPSGKVVRREKPVRMVRSAVAKQREKLVCPVCGILTYTLGNHIATHQEKKRYTCAQCPRSFAQKSNLLVHAKQHTGIKDHICEICGAGFYSQKSLVRHNLIHKGERPFSCNLCTKRFIARCDLNRHLRIHSGYKPFKCNTCTMSFNAKHQLQNHERMHTGERPYTCQVRGTLRSLLTFQMAGLRRHMAIHTGDKRFNCDFCNKKFTQSHHLQNHLLTHTGDRPYTCEVCNVAFSYKVNLNNHVFKVHGINLKFKSIHNVTEDILRREMGMMNETRVAISHIIPQLGEVPTPAAHETVLSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707349;
90% Identity: iTF_00050302;
80% Identity: -