Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000085.1:743105-751475[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.002 0.11 13.1 0.9 1 23 372 394 372 394 0.98

2 11 0.01 0.59 10.9 0.3 2 23 402 424 402 424 0.95

3 11 0.013 0.75 10.6 0.3 1 23 428 450 428 450 0.95

4 11 0.017 0.99 10.2 0.3 1 23 455 478 455 478 0.97

5 11 0.17 10 7.0 0.1 1 22 516 537 516 541 0.92

6 11 0.001 0.059 14.0 1.0 2 23 560 582 560 582 0.94

7 11 2.6 1.5e+02 3.3 0.5 2 23 597 619 596 619 0.82

8 11 0.00014 0.008 16.8 1.0 2 23 633 654 633 654 0.97

9 11 0.00021 0.012 16.2 0.2 2 23 660 681 659 681 0.97

10 11 0.0003 0.017 15.7 2.6 1 23 687 709 687 709 0.97

11 11 4.4e-06 0.00025 21.5 0.6 1 23 715 738 715 738 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.002	0.11	13.1	0.9	1	23	372	394	372	394	0.98
2	11	0.01	0.59	10.9	0.3	2	23	402	424	402	424	0.95
3	11	0.013	0.75	10.6	0.3	1	23	428	450	428	450	0.95
4	11	0.017	0.99	10.2	0.3	1	23	455	478	455	478	0.97
5	11	0.17	10	7.0	0.1	1	22	516	537	516	541	0.92
6	11	0.001	0.059	14.0	1.0	2	23	560	582	560	582	0.94
7	11	2.6	1.5e+02	3.3	0.5	2	23	597	619	596	619	0.82
8	11	0.00014	0.008	16.8	1.0	2	23	633	654	633	654	0.97
9	11	0.00021	0.012	16.2	0.2	2	23	660	681	659	681	0.97
10	11	0.0003	0.017	15.7	2.6	1	23	687	709	687	709	0.97
11	11	4.4e-06	0.00025	21.5	0.6	1	23	715	738	715	738	0.98

Sequence Information

Coding Sequence: ATGGTGTCATATTGTTGCGTTAGAGGATGCAGCAACAATAGCACCAATAAGAAGAAAGATCCGACTTCTTTAATATCGTTTCACGCATTTCCTTCTAATCAAGAACTTAAATGTAAATGGTTGAGAGCCATAGGGCGTCCAAATTGGGTTCCTCCTAGCCATTCTCGTGTGTGCAGCGCACATTTTAATTACGATCAGATCAATTACGATGGCTGCAGAGTAAGAATAAAGGAGGATACAGTCCCTGTCAATTTTTTACCTCTTAACTCTAATTTTGAAGCATCAGAAGTGGAAGCATGCAGGACATGTTTGGCTACAGACGTCAAAATGTACAGTCTACGAGGTACAGACCTGGGACGCTGTATAGATTCTATCTCTGGATTTAATAAAAACTACAATATTGACGGCCTACCACAGTACATGTGTTATCAATGCGCACCACATTTGATCAAATGCAACAAACTCTTAGAGAAAAGTATGGTTGCTCAGGCGGCATTACTTGATATATTTGCCAAGAATGGACAGATAACTAAAAGTCTGATAAAAGAACAAGATAGAAATCAGCTTAACTTGTTGTCTTCTTTAGACAATTATTTAACGACGAACGAATACTATATCATATATGACGATAGCAACAACTCTTCATGTCTTATGAAAACTAAATCCGATACATATGAAAATAATAGTCATTTAAAAAATGAAAGTGAATCTCTGAATGGAGAGACAGACTTAAATGTCTTCAAGACAGATCCAGATATTAAAACTAAAGTAAACTATGTTAAAGAACCCAAATCAAATGAAATGGTTGATGAGGATGTTGTAAATAGTATTAATGATGATGATGATGATCTAGAAGAAGGTATCATGGAAGATTCCCAAATGATTACTAACCTGGATGATGATTTGAAAGAAGATCCTAGTTCCAACGCTGTCAAGCAGAAAAAACGTCATGGAAAAGTAGACAAAAAGAAGTCGGTCAGAAAAAAAGTTAAAGGTTTGACTCCGGATGAAACTGCTATGTTGAAATATTTTGACATCGTAAAGTTATCGTTCGATGAACAAATTCAAGAATGGGAGAAGAGTACAGCCCGTCCCGTAACGAGTGAGACAGTGTACCAATGTGATGTGTGTTACAAAATGTTTGCAAATGTCACTGCTTACCACAGTCATGTAGCTACACACGATCCAAGTCTAGGGCGAGCCGAGTGTCCAGTATGTAAGCTTCGATTCAAAACCGCAACATTAGCGACATCTCACGCTAAACGGGCGCACAGCAAGAAGTTTATCTGCAAGTCTTGTCCCAAAACATTCAATAATGTGGGAGTGGCCAAGAAGCACCAGCTGTGGCACGCGGGCCACGTGTACGCATGCGCGGGCTGCTCGTTCCGCTCGCGCCACGCGTCGGCGCTGGGCGCGCACCGGCGCCGCGCGCACGCCGCCTGCGCGTGCGCACTGTGCGGCGTGCCCGCGCTCAGCGCGCAAGGCCTGCGCCTGCATACACACGCTAAGCATCACACTGCCAAGGATTCTAACATAACTAAGGACTACAGTTGTGTAGAATGTGACATAGACTTTGTGTCGGAGGGAGCGAGGCGGGTCCACTTACTGACATCCAATCAACATAAAACAAAGTCTAATTTGTGTGAACCCACATCAGGCGATCCGTCACTCAGAAATACTTGTACTAAATGTGGTACAATATGTTCGTCTCGGAGCGAGCTCGTGGCCCATTCGAGGGCAGAGCACCCGCGACCCAAACAGCGCTGGAAGGATGACTCTTATCCCACCACTTGTGAACTTTGTGGTGAAGCAGTAAGTACTCGCAGGAAACATTGGCTGCACGTCCTCCGTCAGCATCCTAAACACATCGACACGTACCGCCCTGTCATCACCGCCGTCTGCGACACCTGCGGGAAGGGCTTCCAGAACTCCACAAAGCTCCGCCTGCACCAGCTGCGGCACGGCAGCCCGTCCGTGCGCTGCGGCCGCTGCGCGCGCGTGTTCTACGACAAGTACGCGCTGGCCCGCCACGCGCGCACGCACGACGCGCGCCGCGCGCACCCCTGCCGCACGTGCGGCCGCGCCTTCGCTCTGCGCACCAACCTGCACCGACACGAGCGGGTACACACAGACATCACTCCTTATGAATGTACAATGTGCGGCAAGAAGTTCAAATATTCATCGGGCGTGAATTTACACGTCCGCACTGTGCACTACAAACTGCCACATCCGCCTCGAAAGAAGAGAAAATGCACGAAAGATACGAGTGATTTGTAA
Protein Sequence: MVSYCCVRGCSNNSTNKKKDPTSLISFHAFPSNQELKCKWLRAIGRPNWVPPSHSRVCSAHFNYDQINYDGCRVRIKEDTVPVNFLPLNSNFEASEVEACRTCLATDVKMYSLRGTDLGRCIDSISGFNKNYNIDGLPQYMCYQCAPHLIKCNKLLEKSMVAQAALLDIFAKNGQITKSLIKEQDRNQLNLLSSLDNYLTTNEYYIIYDDSNNSSCLMKTKSDTYENNSHLKNESESLNGETDLNVFKTDPDIKTKVNYVKEPKSNEMVDEDVVNSINDDDDDLEEGIMEDSQMITNLDDDLKEDPSSNAVKQKKRHGKVDKKKSVRKKVKGLTPDETAMLKYFDIVKLSFDEQIQEWEKSTARPVTSETVYQCDVCYKMFANVTAYHSHVATHDPSLGRAECPVCKLRFKTATLATSHAKRAHSKKFICKSCPKTFNNVGVAKKHQLWHAGHVYACAGCSFRSRHASALGAHRRRAHAACACALCGVPALSAQGLRLHTHAKHHTAKDSNITKDYSCVECDIDFVSEGARRVHLLTSNQHKTKSNLCEPTSGDPSLRNTCTKCGTICSSRSELVAHSRAEHPRPKQRWKDDSYPTTCELCGEAVSTRRKHWLHVLRQHPKHIDTYRPVITAVCDTCGKGFQNSTKLRLHQLRHGSPSVRCGRCARVFYDKYALARHARTHDARRAHPCRTCGRAFALRTNLHRHERVHTDITPYECTMCGKKFKYSSGVNLHVRTVHYKLPHPPRKKRKCTKDTSDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01260175;
90% Identity: iTF_01260175;
80% Identity: iTF_01260175;