Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000090.1:3474380-3477264[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6e-06 9.4e-05 22.8 1.2 1 23 264 286 264 286 0.98

2 11 0.024 1.4 9.7 2.0 1 23 292 315 292 315 0.97

3 11 0.00053 0.031 14.9 1.1 1 23 322 344 322 344 0.98

4 11 0.35 20 6.1 5.0 1 23 351 373 351 373 0.95

5 11 1.3 74 4.3 4.1 1 23 379 401 379 401 0.97

6 11 6e-05 0.0035 17.9 1.0 1 23 407 430 407 430 0.95

7 11 0.016 0.96 10.2 1.2 2 23 436 455 435 455 0.96

8 11 4.2e-06 0.00025 21.5 2.0 1 23 462 484 462 484 0.98

9 11 1.9e-05 0.0011 19.4 1.2 1 23 490 512 490 512 0.98

10 11 0.00012 0.0067 17.0 1.0 1 23 518 541 518 541 0.94

11 11 0.0037 0.22 12.2 0.5 1 21 547 567 547 568 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6e-06	9.4e-05	22.8	1.2	1	23	264	286	264	286	0.98
2	11	0.024	1.4	9.7	2.0	1	23	292	315	292	315	0.97
3	11	0.00053	0.031	14.9	1.1	1	23	322	344	322	344	0.98
4	11	0.35	20	6.1	5.0	1	23	351	373	351	373	0.95
5	11	1.3	74	4.3	4.1	1	23	379	401	379	401	0.97
6	11	6e-05	0.0035	17.9	1.0	1	23	407	430	407	430	0.95
7	11	0.016	0.96	10.2	1.2	2	23	436	455	435	455	0.96
8	11	4.2e-06	0.00025	21.5	2.0	1	23	462	484	462	484	0.98
9	11	1.9e-05	0.0011	19.4	1.2	1	23	490	512	490	512	0.98
10	11	0.00012	0.0067	17.0	1.0	1	23	518	541	518	541	0.94
11	11	0.0037	0.22	12.2	0.5	1	21	547	567	547	568	0.94

Sequence Information

Coding Sequence: ATGGCTAACGTAAAAAGTAGAGCACGCAAAAGTGCGCCTATAAAGAGTAAAGCGCCTAAAAGTACGCCTAAGAAGCAACCTGATAAACCGAAAACAACATTAACAGGTAAAATCAAGAAAAAGGCCAAAAATAATAAGTCTCAGAAAAATGAACACATTGTTATGAAAAGGCCAAGCACCAGAAAGGTTTTGACTACAGAAGAAAAAGTACAATATGTATTAGAAAATGGAAATAAGCTCAAAAAAAATTTTGTTTCTATTAAATCAATCATAACAAAACGTAAACCTGAATCTTATCCAAAACCTACATTTTATACAAAAAATTATGATCCTGAACGACCGTTGATATCAAAATCCGGTCGTCTGAAACAGAAAAATAAACACAATTTGGATGTTCTTGATGCTATATTAAAGAGTGAATTAATGATTGATGATAGCGGAAACAGTACAAAAAAATCAAACAATGTACCAGCTTTGATAACTTTACCATTGCAAAAGAATAATAATAATGATGATGATGCCATATCAGATCAAAATGATTCTCTGGAAGATTTTTCAGATGGCTCCGATGATGACTATCTTATGTCTGAAGAGGACTCCGAATCTGATACCTCTGAAAACTTTGATAGTACAATGGAAACAGATGTGACGGAACAAGTGGAAACAGTGACAGAAGAAGTAGAAACAGATGTGACAGAAGTTAACAAAACTAAAAATAATAAAGAAAAAAAAAAGAAACAAAAACTGTGCATTACGTTGAAAAATGGAGTAATATTAAGGATTCGCACCTTTGAATGTGACACCTGTAAAAGATCATTTAGCAGGAAATGGCTTTTGGATAGACACATGCAAGTGCATCTTGGTATAAAGAAACACACGTGCCCTAGATGCTCACAAGAGTTTAGGGCTCGTTACACTATGCAACTTCATCTGGAAACTCAACATAAAGACACTGAAGAATTATTTGTGTGCAAATACTGTAACAAGTCATTTCTTGTAAAAGAAAGCTTAGATATGCATCTGAACACTCACTTGAATGTTGCAAATTCGTTTAGATGTATTTACTGCAATAAGTTATTTAAGCACAATATCTTGTTATTACATCACGAGCAGCAGCATTTGGTTGATGGATTCTATAAATGCACACTGTGTGACATGAACTATCGGTGTCGCCAGCGCTTGTACGCGCATGTTAAAAGTCACTTGAAAATCAAAGATTATGTCTGTCATTACTGCGGTAAAGGATTTTTAAGACAGGGTACCTTGTCACGCCATCTTGATATTAGTCACGGTGGACAAAGAATTGTCTGTCCAATTTGCAAGAAGAATTTGAAGGGACATTTATCTGAGCATATGCGGACACATGATAAGAAGCTGAAACCTCATAAGTGCCCTGACTGTGGCCAAAGGTTTATTCAGTCTACACAAATGAATGTCCACCGTCGTTCACACACTGGCGCCAGGCCTTACGCGTGCCGAATATGCACCCGCGCCTTCTCTCACTCTAACGCTCTCATGTTACATATTAGACGTCATACTGGAGAGAAGCCCTTCCTTTGTCTTATGTGCCCAATGTCTTTTTCTCAACTACCGCATATGAAAGCACACATGCGCAAAATTCATGGCAAAAATGACCCTTACAAATGCTCTAAATGTGACATCTTTTTCAAGCTCAAAGCACAGCTTGACAGTCATGAGAAGATATGCTCTGTAGGAACTACAGAAACTGTTGGAGGTAAAAAGAAAAAGTCCAAGAATAATGATGAAACAGAAGTGGAGTCGTCGATGTCGCTTTCCCGCATGAGATTCCTGTTGGCGCTACTCCTCACGATGGTCGCTTCGGCAGACAGACTCAAAATCTTAGGTTTCAACAAACGGCTTATAGATGACCTCCTTATTGAATCTTTGGAGGCAATGGACCAAACTCCTTGTAAAGACGACACTCTGTCGCCGCTAAAGCGTCTCAGGATGAACATAGAGATATTGATGGCTAGTACCGTTCCGAAAACGCAAATGGAGACGTTCAAGAGAGAGAATCAGACGACTGAAGACATTCTGGAACTGTTGACGAATGAGCCGGATAAGACGGAAAACCGCCAAGAATTCGAAATGTAA
Protein Sequence: MANVKSRARKSAPIKSKAPKSTPKKQPDKPKTTLTGKIKKKAKNNKSQKNEHIVMKRPSTRKVLTTEEKVQYVLENGNKLKKNFVSIKSIITKRKPESYPKPTFYTKNYDPERPLISKSGRLKQKNKHNLDVLDAILKSELMIDDSGNSTKKSNNVPALITLPLQKNNNNDDDAISDQNDSLEDFSDGSDDDYLMSEEDSESDTSENFDSTMETDVTEQVETVTEEVETDVTEVNKTKNNKEKKKKQKLCITLKNGVILRIRTFECDTCKRSFSRKWLLDRHMQVHLGIKKHTCPRCSQEFRARYTMQLHLETQHKDTEELFVCKYCNKSFLVKESLDMHLNTHLNVANSFRCIYCNKLFKHNILLLHHEQQHLVDGFYKCTLCDMNYRCRQRLYAHVKSHLKIKDYVCHYCGKGFLRQGTLSRHLDISHGGQRIVCPICKKNLKGHLSEHMRTHDKKLKPHKCPDCGQRFIQSTQMNVHRRSHTGARPYACRICTRAFSHSNALMLHIRRHTGEKPFLCLMCPMSFSQLPHMKAHMRKIHGKNDPYKCSKCDIFFKLKAQLDSHEKICSVGTTETVGGKKKKSKNNDETEVESSMSLSRMRFLLALLLTMVASADRLKILGFNKRLIDDLLIESLEAMDQTPCKDDTLSPLKRLRMNIEILMASTVPKTQMETFKRENQTTEDILELLTNEPDKTENRQEFEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -