Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000087.1:915942-924335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.22 13 6.7 3.8 1 23 389 411 389 411 0.95

2 9 2.3e-06 0.00014 22.3 0.9 1 23 458 481 458 481 0.97

3 9 3.6e-05 0.0021 18.6 0.3 2 23 487 508 487 508 0.97

4 9 2.1e-05 0.0012 19.3 3.3 1 23 516 538 516 538 0.97

5 9 5.5e-05 0.0032 18.0 0.1 3 23 545 565 544 565 0.99

6 9 2.8e-06 0.00016 22.1 1.4 1 23 574 596 574 596 0.99

7 9 1.1e-06 6.3e-05 23.4 0.7 1 23 602 625 602 625 0.98

8 9 0.046 2.7 8.8 0.4 1 14 631 644 631 654 0.88

9 9 0.085 5 8.0 3.9 1 23 662 685 662 685 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.22	13	6.7	3.8	1	23	389	411	389	411	0.95
2	9	2.3e-06	0.00014	22.3	0.9	1	23	458	481	458	481	0.97
3	9	3.6e-05	0.0021	18.6	0.3	2	23	487	508	487	508	0.97
4	9	2.1e-05	0.0012	19.3	3.3	1	23	516	538	516	538	0.97
5	9	5.5e-05	0.0032	18.0	0.1	3	23	545	565	544	565	0.99
6	9	2.8e-06	0.00016	22.1	1.4	1	23	574	596	574	596	0.99
7	9	1.1e-06	6.3e-05	23.4	0.7	1	23	602	625	602	625	0.98
8	9	0.046	2.7	8.8	0.4	1	14	631	644	631	654	0.88
9	9	0.085	5	8.0	3.9	1	23	662	685	662	685	0.95

Sequence Information

Coding Sequence: ATGTTGCATAACACCGGGCCTTATGGGCCGAACGAGCCGCCAGTAAATATGGGAGCGCCCGTCAACATGACCCAAATGGGTGGTCATATGAATCTCGCTCATAACATTAATAATTTGAGCAAAATTGCCCAGCAGGGTGTGCCACCACCGAGCGGGCACTACAACCTGCCGGAGTATCCGCCGTACAGCCATTCTCCTTTAGGTATGCCTCCACAAATGCCTCAGTTTCCAAGCTATCAGCCACTGGGATTTCAACATGGCTATATGAATCAAAACGCGAATTCTATCAACGATTTGTCATGGCAGAATGGTATGTTTCCTATGAATTTAAATATGCAAAATGAACATAACGCTAATATGATGAATTATGCATACGATAAGAGATTAGCAGACTCAGTTAGACAAGAGAAAGAGCAAAATATGAGAAAAATGGAGTTGAATATACCCCAGATACCAAATAAGGCTTTCGCCAAACACATGGATAACAGCTACATGCATAATGATTTGTACCAAAACTCTCACAATCTAGATTTAAGTATGAAAACGCAGGAGAAATTCCAATTGGATAATACACGTAGGAAAAACATTGAACATACAGTGAAATTAATTGAAAACATACTTATACAGTCGTCCAAACCTAGGGAAGAGTCTCCTGAATTACCTGACGAATTGGATATTCCTGACGATGCTAGCAACGAACCTTCAGATATGACAATAGTTAACGTCAGAAATTTAACGAAACCTACAAAGGTACTCGAAACAACGAGCGTAGATCCGTTAGCTCTATCTCCTAACAATTCAACTAAAGAACAACTAAATACGGATAACGAAGACAATGAAAAGTCTAATTCTACTGCTGACATCGACAAAAGGGAGTCCGAAGAAGACTCATCTTCTGAAGAAGAAGTAGATGTGAAACCTGTAGGAATTACGGAAAAAATTAGTCCGCAAGAAAATACTGAAATTGTCGACCCAGGAGATACAGGCATTGTTATAAAAATTGAGAAAGCTAGTTGGGCTGATACGGAATGTTTTACACCGTTTTTAAAAGATTATCATGGGTTTCAAGGAGATGAGCCAATGAACTGTAGAGTTATTGACGGAGAAAACAGCATAAACGAAGCTGTTGCTGCTTATAAAAATGCCATAAAACCCGAAGGTGTCTTCGAATGCCCGCACTGCAGTCTCCTTTTCAAGCACCCAAAGAGATTTCTTATCCACAACAAATGGCATACTTTTGGCCTTACCAACGAAAAAAGGAATGAAATAGCTAAAATACGTGAACAAAGACGGTTTCAGAGGAAGGAAGCTAAGATTCTTGAGCGGATGCAGTCTAATGAGATTACGGACGTTCCTGTGGATGGAAAGGTGTTTCCGTGTAAGGATTGCGATAAAGTTTTTAGTGCTAAAGGTAGCTTGAAGAACCATAGACAGAGGACTCATCCTACCCGCGTCCGTGAATGTAAAATATGTCACAAAGTTATAACCAGTTGGACGGCTCTGCGCGCGCATATAGCAACTCACTCCGCCGACTCGGGCCCGGGGTACCAATGTAGCGAATGTCCCAAGCGATTCAAGTACTCACACTCGCTCGCTAAACACTCGGATACGCATTTGGAAAAGACTCACGGTTGCGCGGAATGTCCCAAGAAGTTCGGTTCAGCTGCCCTTCTGAAGATGCATATGAAAACCCACGAGCGGATGCTGCGCGGCGCTACCTACAGATGTACTTATTGTGGAAAGGGATTCTTTGAGTCTTATAGCTTACAGGTACACGAAAGGACACACCGCAATGAGAGGCCATATACCTGCGAGATCTGTAACACCAGCTACGGAACCAACTCAAGCCTCAAGAGACATATTAAAGTGTCCCACAACAAAGCTAAACCATACCAATGCACGGTTTGTAAGAGGAACTTCTCCACGGAGTCCATCAGAGATCGGCATGAGGTCCGCGTCCACGGCAACCCTGAAGACTTCAAGTTTCCTTGTAAACAGTGCGCTTGCAAATATACAAAATTAAAAGATCTTCAAAAGCACGTCTACAAAATGCATCCGAAAGGTAAAAGGAAGAAAAAGGTTAAAAGTGACTCGGAATAA
Protein Sequence: MLHNTGPYGPNEPPVNMGAPVNMTQMGGHMNLAHNINNLSKIAQQGVPPPSGHYNLPEYPPYSHSPLGMPPQMPQFPSYQPLGFQHGYMNQNANSINDLSWQNGMFPMNLNMQNEHNANMMNYAYDKRLADSVRQEKEQNMRKMELNIPQIPNKAFAKHMDNSYMHNDLYQNSHNLDLSMKTQEKFQLDNTRRKNIEHTVKLIENILIQSSKPREESPELPDELDIPDDASNEPSDMTIVNVRNLTKPTKVLETTSVDPLALSPNNSTKEQLNTDNEDNEKSNSTADIDKRESEEDSSSEEEVDVKPVGITEKISPQENTEIVDPGDTGIVIKIEKASWADTECFTPFLKDYHGFQGDEPMNCRVIDGENSINEAVAAYKNAIKPEGVFECPHCSLLFKHPKRFLIHNKWHTFGLTNEKRNEIAKIREQRRFQRKEAKILERMQSNEITDVPVDGKVFPCKDCDKVFSAKGSLKNHRQRTHPTRVRECKICHKVITSWTALRAHIATHSADSGPGYQCSECPKRFKYSHSLAKHSDTHLEKTHGCAECPKKFGSAALLKMHMKTHERMLRGATYRCTYCGKGFFESYSLQVHERTHRNERPYTCEICNTSYGTNSSLKRHIKVSHNKAKPYQCTVCKRNFSTESIRDRHEVRVHGNPEDFKFPCKQCACKYTKLKDLQKHVYKMHPKGKRKKKVKSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -