Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000112.1:1642009-1648254[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.77 45 5.0 0.2 3 23 110 130 108 130 0.95

2 17 1.2 68 4.4 0.0 2 23 134 156 133 156 0.94

3 17 0.0043 0.25 12.1 0.9 2 23 389 411 388 411 0.95

4 17 0.051 3 8.7 0.1 1 20 419 438 419 440 0.94

5 17 0.0068 0.4 11.4 0.9 2 23 450 471 449 471 0.94

6 17 0.0095 0.55 11.0 1.6 1 23 519 542 519 542 0.95

7 17 0.059 3.4 8.5 0.4 2 23 619 641 619 641 0.86

8 17 5.1 3e+02 2.4 2.6 1 23 646 669 646 669 0.94

9 17 5.5e-05 0.0032 18.0 1.8 1 23 675 697 675 697 0.96

10 17 1.1e-05 0.00063 20.2 1.3 1 23 704 726 704 726 0.98

11 17 9.3e-05 0.0054 17.3 2.3 1 23 731 753 731 753 0.96

12 17 0.0013 0.074 13.7 1.3 1 23 759 781 759 781 0.98

13 17 3.1e-07 1.8e-05 25.1 2.6 1 23 787 809 787 809 0.98

14 17 0.0006 0.035 14.8 2.6 2 23 816 837 816 837 0.98

15 17 0.00088 0.051 14.2 0.8 2 23 845 867 844 867 0.97

16 17 3e-05 0.0018 18.8 0.2 1 23 872 894 872 894 0.97

17 17 0.0016 0.091 13.4 2.4 2 23 901 923 900 923 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.77	45	5.0	0.2	3	23	110	130	108	130	0.95
2	17	1.2	68	4.4	0.0	2	23	134	156	133	156	0.94
3	17	0.0043	0.25	12.1	0.9	2	23	389	411	388	411	0.95
4	17	0.051	3	8.7	0.1	1	20	419	438	419	440	0.94
5	17	0.0068	0.4	11.4	0.9	2	23	450	471	449	471	0.94
6	17	0.0095	0.55	11.0	1.6	1	23	519	542	519	542	0.95
7	17	0.059	3.4	8.5	0.4	2	23	619	641	619	641	0.86
8	17	5.1	3e+02	2.4	2.6	1	23	646	669	646	669	0.94
9	17	5.5e-05	0.0032	18.0	1.8	1	23	675	697	675	697	0.96
10	17	1.1e-05	0.00063	20.2	1.3	1	23	704	726	704	726	0.98
11	17	9.3e-05	0.0054	17.3	2.3	1	23	731	753	731	753	0.96
12	17	0.0013	0.074	13.7	1.3	1	23	759	781	759	781	0.98
13	17	3.1e-07	1.8e-05	25.1	2.6	1	23	787	809	787	809	0.98
14	17	0.0006	0.035	14.8	2.6	2	23	816	837	816	837	0.98
15	17	0.00088	0.051	14.2	0.8	2	23	845	867	844	867	0.97
16	17	3e-05	0.0018	18.8	0.2	1	23	872	894	872	894	0.97
17	17	0.0016	0.091	13.4	2.4	2	23	901	923	900	923	0.96

Sequence Information

Coding Sequence: ATGACCTCAGACGAGTCGGATGATGAACCTCTATCTGTTATAGCGGCAAATAAAAAATTGAATCCTGATCTGTACATAGATGTTGTATCAGAAGTTCCAAAAAAGAAGAAAAAGAAATTACCTCCGCCTAAACGGCTCTCGATCACTATAAAGCTTCAAAACAAAAATCCTTCAACACCGCCAGTAATTGAGCGGCCCACTGATGTGTGGCTTTACTTGAAGGATCTTAACCCTGCAGGTCCGTACAGTTGCTTGCTATGCTCAGATTGGTTTATAAATCGATCCAAAATGATAATTCACTATGTCTTAAACCATAAAAAAGACTTCTGTGGCATTTGTCGATATTTCGTACCTGACAGAGAGTCTTGGTGGAAACATGTAAAGTTTCACACTCCTTGGCCTTGCTCCCAATGTGTTGAAAATTTTGAGGCAGAAGAAGTGTTACGGAACCATCTTAGAGCTATCCACAATCTAGTACATTGTAGACTTTGCCACTTTCGCGTTCTTGATGGTGAACCATATCATACACATTTATTTCAAAAACATAATGTCACTAATGCAGGAAATAAAGATGAGGAGTCTTTGTGGGAATTGGAATATGATGGGACTTCAAATTTTATTTGCATGCTTTGCTCTAAAACAAATATCCAAACCCGGATGTTCTTTCAGCATTATATGGGCTACCATCATTTCACACTTAAATGCTTTACTTCTCTTATCTCTGGTAGAGATCCACCTTTCACAGTATCTGGTGCTGATTTAAGAACTCAATTTGTTGAAGAACAATTAAAAAACCATGCTACGTTTGGTTATGTTGACTCTAGTATTAAGCCGAGTATTACAGAACCTGAACAAACCGATACTAAAGATTTAATAAAAGTTCTTATACCAGAAATTAAACAGGAAGTAATAAGTGCTGACAATAATTCTAAAAATGATGATGATAATGAAAAAGATAAAAGGAAGGATGAAGAATTGGAAGATATTTATAAAAATTATAATGGTGACAATGACTTTGATGTGACACTAATGGAGCTGATAGTCATACAAAAATGCTACTATGATTATATAAGTGACATATTGTCAGATGTTAACTCTAATTCTGTTTATGAATATTCCGAAATTGATTATGATAAGATTACAACAGAAATAACAATGGATATAGTTTGTTCTCTATGCAGTATCCGGTATAGTAACTTGTCGACTTTTACCACTCACATGTTCAAAATGCACTGTGTAAAGTCATCACCTATATTTTCATGTAGGGTATGTGCAACAACTTTTGATACTTTAAATGAGTTGGAAAATCACACAGCAAATGAGTTGTCTGACTTTAATGAATTGTGGATTTGTCAATTTTGTGATAAGGAGTTTAATGATAGAGAGACAACTAGGAAGCATTTGACTGAGCATTGGAATGTGATGGAGTATGATAACTGTTTTAGTCCACACTTAGGCTTCAAGTGTATGTTTTGTCCAACATTATTCTGGCATGAAACTGACAGGGAAACACATCAGCTTCGGGCTCATTTCTTTAATCATAAAGGAGCTTATTACAAATGTGAAAATTGCAATGATGTGTTCAGTGATAAGGTCTGGTTTATCCACCATTATTTAGAAAAGCACAGCAATTTAGATGACATACCACTTTATCTCCTGAAGTGTACACTTTGCTGTTTGGTATTACGTACCATTGAAGATATGAGGGTTCATTTTAACAGTGAACACCCAGAAGCAAGAAAGGTGTATTGCTCTTTAGACCCTTGCAAGTATAAGCCTCTGAGCCACAGGAAGTCTTTTAAGTTACATGTTCGGTCGATCCACACAGCGCGGTCTCGTCCAGAGCGCGGCGCAGAATGTACAGTGTGTGGTCGAGAGTTCACTTCCTCTCGCGCCTGCGGGGCACACATGGCGCAGGCGCATGGGCCTGGCAAGTTCAAGTGCAAGCTTTGCAGGGAGACACTGCACACTATGGACGAAAGAAAACTCCACTACCTCATCAGTCATCCTGGGCAGCACCCGTTCGAATGCTCTGAGTGTGGCAAGTCGTTTCAATACAAGTCATCTTTGTACATGCACAAACAGGATCATGTGCCTAACAAGCAAAACTATACATGTACCTATTGCGGGAAGGTGTTTATGAAACGCGACTCGTTCCGCGAACACGTGCAGATCCACGAGGGTCCCCGCCACGCGTGTTCTTACTGCCCCATGCGCTTTGTGCAGCGCTCCAACATGCTCCGTCATGAGCGACGTCACACTGGAGAGAGGCCGTATGCCTGCCCTCACTGTCCGAGGAACTTCGCCGATAAGGGAGCCTGTAACTCTCATGCTAGGACACACTTGAAGAATATATCGTACTCGTGCGTGTACTGTGGCAAGACTTTCGTGCAGAAGTCCAAACTGAAGTACCATATCAGGAAACATACCGGAGAAAATCTGGAGACCTGCACTGTGTGTTCCAAGTTATTCACCAGCGCTTGTTCGTTGCGCGAACATATGAAGATACATGAACCTAAGTCGGAGTTGATCAAATGTCCGCTATGTGATCGCAAGTACCAAGACGAACGCTACATGCTGCGTCATCTCCGTACCACACACACTCGAGCGCGACACCCCTGTCCTATCTGTGGCAAAATGTTAACCAGTGCTGCAGGGTTAAGACACCATGTTATTACACATAGCTCACTCAAGACTCTCACATGCAAAATGTGTCCGAAATCCTACTCAGTGAAGAGGACAATGATCAAACATTTCCGCCGGCGTCATGGTTTTAAGGGCAATGAGCCTAATATGAAAGAGTTCTACACTAGACTGGACCCGCGCGACTGCAACCTCGGACTCGACGAACCAGTCATGACCAGCATATTCGGACCTCCAAAGAAACGAGTGGATGAACTCTTAATGGGTGATTTCGTTACTTTAGCAACGCTAGAACAACAAAGAAGACTTCAAGAAGAACAAGAAGAAAGTGATAATACAGAAGATGCTGCAAATGATGATGATAAATCTCAGTCAGACGATGAAGTATCAAGAGAGAGTGAAAAGGATACAGATAGTAATGAAGTGAAAGATCAAAAGATTGTCATTAAAATTGAAGCTAAAGACAGTGATCCTGAACACGATAATGAGCTGGAACCAACTGATTTCGTTAGCGTCAAGATTGAACCAATGGATGATGATAACGCCTAA
Protein Sequence: MTSDESDDEPLSVIAANKKLNPDLYIDVVSEVPKKKKKKLPPPKRLSITIKLQNKNPSTPPVIERPTDVWLYLKDLNPAGPYSCLLCSDWFINRSKMIIHYVLNHKKDFCGICRYFVPDRESWWKHVKFHTPWPCSQCVENFEAEEVLRNHLRAIHNLVHCRLCHFRVLDGEPYHTHLFQKHNVTNAGNKDEESLWELEYDGTSNFICMLCSKTNIQTRMFFQHYMGYHHFTLKCFTSLISGRDPPFTVSGADLRTQFVEEQLKNHATFGYVDSSIKPSITEPEQTDTKDLIKVLIPEIKQEVISADNNSKNDDDNEKDKRKDEELEDIYKNYNGDNDFDVTLMELIVIQKCYYDYISDILSDVNSNSVYEYSEIDYDKITTEITMDIVCSLCSIRYSNLSTFTTHMFKMHCVKSSPIFSCRVCATTFDTLNELENHTANELSDFNELWICQFCDKEFNDRETTRKHLTEHWNVMEYDNCFSPHLGFKCMFCPTLFWHETDRETHQLRAHFFNHKGAYYKCENCNDVFSDKVWFIHHYLEKHSNLDDIPLYLLKCTLCCLVLRTIEDMRVHFNSEHPEARKVYCSLDPCKYKPLSHRKSFKLHVRSIHTARSRPERGAECTVCGREFTSSRACGAHMAQAHGPGKFKCKLCRETLHTMDERKLHYLISHPGQHPFECSECGKSFQYKSSLYMHKQDHVPNKQNYTCTYCGKVFMKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRNFADKGACNSHARTHLKNISYSCVYCGKTFVQKSKLKYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHEPKSELIKCPLCDRKYQDERYMLRHLRTTHTRARHPCPICGKMLTSAAGLRHHVITHSSLKTLTCKMCPKSYSVKRTMIKHFRRRHGFKGNEPNMKEFYTRLDPRDCNLGLDEPVMTSIFGPPKKRVDELLMGDFVTLATLEQQRRLQEEQEESDNTEDAANDDDKSQSDDEVSRESEKDTDSNEVKDQKIVIKIEAKDSDPEHDNELEPTDFVSVKIEPMDDDNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -