Ppyg003320.1
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- ZBTB41
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000023.1:534468-536670[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.47 27 5.6 0.1 2 23 33 53 33 53 0.95 2 13 4.6e-06 0.00027 21.4 0.5 1 23 59 82 59 82 0.95 3 13 1.4e-07 8.2e-06 26.2 1.6 1 23 88 110 88 110 0.98 4 13 0.00047 0.028 15.1 0.0 1 23 116 138 116 138 0.96 5 13 0.00014 0.0083 16.7 0.1 2 23 144 165 143 165 0.95 6 13 0.95 55 4.7 1.8 6 20 175 189 174 194 0.90 7 13 0.76 44 5.0 1.7 1 23 250 271 250 271 0.94 8 13 0.00032 0.019 15.6 1.0 2 23 441 463 441 463 0.96 9 13 6.7e-05 0.0039 17.7 0.7 1 23 469 491 469 491 0.96 10 13 7.5e-06 0.00044 20.7 2.1 1 23 497 519 497 519 0.98 11 13 0.0021 0.12 13.1 6.6 2 23 526 547 525 547 0.97 12 13 0.00066 0.038 14.6 3.1 1 23 553 575 553 575 0.98 13 13 0.00049 0.028 15.0 1.8 1 23 580 603 580 603 0.96
Sequence Information
- Coding Sequence
- ATGAAGCTCGAAGAAACTGGCGAAAACTTGACCAAAGTTGTCGAAGATTTCGAGAAACCAGAAGTGACGGTGGGCGAGGATGGGAAACGATACGCCAAGTGTGGAGTATGCCAGAAGAGTGTGACGGTGGGGGGGTGGCGGCGACACGTGCGCGCGCACCGCGGGGAGAGGCGGTACAGCTGCCACACGTGCGGGCTCGCCTTCAACGACAGCGGAAACCTGGCGAGACACACTAAAGCCTTACACGCCAAGCACAGACCTTACATCTGTCCTATATGTCGGAAATCCTTCTCCAGGAACAGTCATTTAGAAGATCACGTGAAATCGCACTCTGAGAGACGCGAGTTTGTGTGCGAGGTGTGCGGGAAGGCCAGCAAGTCGCTGGCGGCGCTGCGCATGCACCGCGTGGTGCACGGCGCCTGCGCCTGGCGCTGCGTGCAGTGCGGCGCGCGCTTCAAGCGCCGCGCAGAGCTGCGCGCGCACGCCAGCGTGCACTCCGGCGAGCGCGCGCACGCCTGCGCCTGCGGCCTCTCCTTCCGCCTGCGCGCGCAGCTCAACCAGCACCACGCACACTGCGCGCACGCGTTCACGGCGATCACTGAGTACGTGGTGCAGTCGCTGGAGCCCCCGAAGTACCGGGAACCCATGAGCCCCGCCCTCGGCCAGCGCCACTGCACCTATTGCACCACATCACACGATAATTCTTCCTACCAAGAACATCTGATCACAGCACATGCAGACTTACTGTTCTATTGTGAGGAATGTGACAATTGTATCGACAGAAAAGACTTCATCCTCCACATGTCACTCCACGCGGCACAATACAGTTCCAGGCAAGTGAAAAAGGAGAAACGACGAAAAGTAAATAAGAAGGAGGAGAGAAGCGAAGTTGATATTAACCAAAATACTAACGAAACAGAAGAAGATCCAACAACCACTGACCAGAAAAGTATGAAAGAAAACCAAGAAAACGAATTTTCGGATCACAGTGATATGGAATACGGCTTTGGACCTCTACCCGAGTCAGTGTTTGAAGCCATTGAGGATTCACAAGATAGCCAGCCGTACGAAGAAGATACAAGTCACTCGCCAGAAAATGAACCCGCGAGCGAAGAGTCCAACAAATCTATCCTCCCTAACCTAGAAGATAGTCTGAGTAATTCTATGCCACCAGGGGAAGCTAGCAACCTGAGCCCCCCCCTGCCTTCCGTTCAAAGTGCTAATGAATCTAACGCCGTAGAAAATAATGAAGTTAGCAATAGTGGTCCACCTGACGAAAGTAATAAAAATCAAAGTAAAAAAGATGTTAGAAAAACTCGCACATGTCCCATCTGTTCTAAAACGTACACAGCGTCGTCCAGCTACTTCTACCACATGAAATACTTCCATCAAACTAGTAAGAACCATCGCTGTGAGATCTGTGAGAAAAAGTTTGGAACTAAAGCTAGTCTCATACAACACGCGTCCATCCACACAGGAGAACGCCAATTTGAGTGCAAAGAGTGCAAGAAAAGATTCAGATCTAAAGCAAGCCTCTACATCCACGAACAAACTCACAACGGAATCAAATCCTGGTCGTGCACCCAGTGCCATAGATCCTTCAGATGGAGGACACATCTGCTCCGACATATGAAACGGCATTCAGCTGAGAAAGGTCACGTGTGCACAACTTGCGGTCGTGGATTCAATATCAGGTGCGATTTACTTCGACATGCGCGCACGCACACTGCCGGGAACTTTGAATGTGAGAAATGTAAACTGAAATTCGCTCAGATGAGATACTTGAAAGTACACATGGATAAAAAGCATTCGACGAACATTGTAAAGAAATCTCAGTAA
- Protein Sequence
- MKLEETGENLTKVVEDFEKPEVTVGEDGKRYAKCGVCQKSVTVGGWRRHVRAHRGERRYSCHTCGLAFNDSGNLARHTKALHAKHRPYICPICRKSFSRNSHLEDHVKSHSERREFVCEVCGKASKSLAALRMHRVVHGACAWRCVQCGARFKRRAELRAHASVHSGERAHACACGLSFRLRAQLNQHHAHCAHAFTAITEYVVQSLEPPKYREPMSPALGQRHCTYCTTSHDNSSYQEHLITAHADLLFYCEECDNCIDRKDFILHMSLHAAQYSSRQVKKEKRRKVNKKEERSEVDINQNTNETEEDPTTTDQKSMKENQENEFSDHSDMEYGFGPLPESVFEAIEDSQDSQPYEEDTSHSPENEPASEESNKSILPNLEDSLSNSMPPGEASNLSPPLPSVQSANESNAVENNEVSNSGPPDESNKNQSKKDVRKTRTCPICSKTYTASSSYFYHMKYFHQTSKNHRCEICEKKFGTKASLIQHASIHTGERQFECKECKKRFRSKASLYIHEQTHNGIKSWSCTQCHRSFRWRTHLLRHMKRHSAEKGHVCTTCGRGFNIRCDLLRHARTHTAGNFECEKCKLKFAQMRYLKVHMDKKHSTNIVKKSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -