Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000138.1:715255-723513[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 3.1e-05 0.0018 18.8 0.3 1 23 206 228 206 228 0.98

2 29 0.00096 0.056 14.1 1.1 2 20 258 276 257 278 0.93

3 29 0.00015 0.009 16.6 0.0 2 23 309 331 308 331 0.96

4 29 0.03 1.7 9.4 3.7 1 23 379 402 379 402 0.97

5 29 0.044 2.5 8.9 0.6 1 23 422 444 422 444 0.95

6 29 0.00067 0.039 14.6 1.0 2 20 485 503 484 505 0.93

7 29 0.0018 0.1 13.3 4.1 2 23 547 569 547 569 0.97

8 29 0.0022 0.13 12.9 0.6 1 23 619 642 619 642 0.97

9 29 0.018 1 10.1 0.1 1 23 694 716 694 716 0.97

10 29 0.00091 0.053 14.2 5.3 1 23 727 749 727 749 0.98

11 29 0.05 2.9 8.7 2.1 2 23 761 782 760 782 0.96

12 29 0.004 0.24 12.1 0.5 1 23 792 814 792 814 0.98

13 29 0.033 1.9 9.3 4.1 2 23 844 865 844 865 0.96

14 29 0.0028 0.16 12.6 1.7 1 23 876 898 876 898 0.97

15 29 2.7e-05 0.0016 19.0 1.1 1 23 906 928 906 928 0.98

16 29 0.00067 0.039 14.6 0.2 2 23 948 970 947 970 0.97

17 29 1.4 80 4.2 1.0 1 23 988 1010 988 1010 0.91

18 29 0.12 7 7.5 3.4 1 23 1017 1039 1017 1039 0.97

19 29 0.19 11 6.9 1.7 2 23 1050 1072 1049 1072 0.95

20 29 0.002 0.12 13.1 0.2 2 23 1095 1116 1094 1116 0.95

21 29 1.8 1.1e+02 3.8 2.8 2 23 1159 1181 1158 1181 0.93

22 29 0.0056 0.33 11.7 0.3 2 23 1197 1218 1196 1218 0.94

23 29 1.6 91 4.0 4.7 5 23 1228 1246 1225 1246 0.94

24 29 0.015 0.85 10.4 0.8 2 23 1257 1279 1256 1279 0.95

25 29 0.41 24 5.8 3.2 2 23 1296 1314 1296 1314 0.88

26 29 0.68 40 5.1 2.4 2 21 1318 1337 1317 1338 0.93

27 29 0.0074 0.43 11.3 0.7 2 23 1358 1379 1358 1379 0.96

28 29 0.18 11 6.9 0.5 2 23 1386 1407 1385 1407 0.93

29 29 0.0018 0.1 13.3 0.4 2 23 1418 1440 1417 1440 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	3.1e-05	0.0018	18.8	0.3	1	23	206	228	206	228	0.98
2	29	0.00096	0.056	14.1	1.1	2	20	258	276	257	278	0.93
3	29	0.00015	0.009	16.6	0.0	2	23	309	331	308	331	0.96
4	29	0.03	1.7	9.4	3.7	1	23	379	402	379	402	0.97
5	29	0.044	2.5	8.9	0.6	1	23	422	444	422	444	0.95
6	29	0.00067	0.039	14.6	1.0	2	20	485	503	484	505	0.93
7	29	0.0018	0.1	13.3	4.1	2	23	547	569	547	569	0.97
8	29	0.0022	0.13	12.9	0.6	1	23	619	642	619	642	0.97
9	29	0.018	1	10.1	0.1	1	23	694	716	694	716	0.97
10	29	0.00091	0.053	14.2	5.3	1	23	727	749	727	749	0.98
11	29	0.05	2.9	8.7	2.1	2	23	761	782	760	782	0.96
12	29	0.004	0.24	12.1	0.5	1	23	792	814	792	814	0.98
13	29	0.033	1.9	9.3	4.1	2	23	844	865	844	865	0.96
14	29	0.0028	0.16	12.6	1.7	1	23	876	898	876	898	0.97
15	29	2.7e-05	0.0016	19.0	1.1	1	23	906	928	906	928	0.98
16	29	0.00067	0.039	14.6	0.2	2	23	948	970	947	970	0.97
17	29	1.4	80	4.2	1.0	1	23	988	1010	988	1010	0.91
18	29	0.12	7	7.5	3.4	1	23	1017	1039	1017	1039	0.97
19	29	0.19	11	6.9	1.7	2	23	1050	1072	1049	1072	0.95
20	29	0.002	0.12	13.1	0.2	2	23	1095	1116	1094	1116	0.95
21	29	1.8	1.1e+02	3.8	2.8	2	23	1159	1181	1158	1181	0.93
22	29	0.0056	0.33	11.7	0.3	2	23	1197	1218	1196	1218	0.94
23	29	1.6	91	4.0	4.7	5	23	1228	1246	1225	1246	0.94
24	29	0.015	0.85	10.4	0.8	2	23	1257	1279	1256	1279	0.95
25	29	0.41	24	5.8	3.2	2	23	1296	1314	1296	1314	0.88
26	29	0.68	40	5.1	2.4	2	21	1318	1337	1317	1338	0.93
27	29	0.0074	0.43	11.3	0.7	2	23	1358	1379	1358	1379	0.96
28	29	0.18	11	6.9	0.5	2	23	1386	1407	1385	1407	0.93
29	29	0.0018	0.1	13.3	0.4	2	23	1418	1440	1417	1440	0.96

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTTGGCAAATGCAGGCTTTGCCTCAAGCTCTTGCTCGGAGACTTTTACTCCATCTTTACGGTGGACAATGCCTTGCAGCTCGCGGAGATGGCAATGGAATGCGCCCGGGTGAAAATATACGATGGCGACGGGTTGCCAGACAAAGTATGTACGGAGTGCATACAAAAACTCAGCAGCGCGTATATTTTTAAACAGCAGTGTGAGCGAGCTGATCAAGAGTTACGTCGCAACTATGTACCACCACCAGGATTCAGCATTAGTCCGCCCCCACCCAATAGACAGAGCAGTGATTCCGCATTTTCAAATCATACCGACAGCTCTAACCTCACAAAACCCTCGTCCACCATCGAAGAGAAAATATCCCCCGCCAACAGAAGTAGGAAGCGTAGTATGGACAGCGTTGACAATGCATCCACAGGTGGCGCGTCCGGGGACTACAAACCCAGTGTCTCCAAACGTGTCGAAGAACTAAGGCGATCGCAAAAGAGGCCAAGAAAACAGTCTGGAAATATATCACAATTGGATTCTGACTATGATAATGAAGATACTAGCGCCTCGTACCTAGGCGAAACAGATTCCGACGAACCTTTACTTAAAACCAGTTATAATTGCGACATCTGCAATAGAAAATTCCCTTCCCCCAGAAGTCTAGCTGTCCACAAAAGAATTCATGATAAAAAGGAGTCCCTCATCGAGAATGCTGTCGTTGATATACCAGAAACAAATACCGAAGATGCGACTGATTCAGATGATAAACTGAACTGCGATAAATGTGGGAAGACGTTCAAATTAAAGATCATGTTAAAACGCCACCATGACCTTTGTGGACAGACTTCGACGCCCAAAACGTCACCACAAAAAGAGTTGCTCGTGTCCATAGAACCCATTGACGGTATGAAGAACAGAAATATTGAATGTGAAATGTGTGGCGCTAAATTCAAGGCGGTCGACAATTTGGCGAAACATATGAGAGTGGTGCATGCTGCCATCTTGAAGAAGGAGGATAAAAGGGCAAATGGGAAGGTATCAGTGCCTTGTCTGTACTGCCATACATTATTTGACGATTATTACATACATAGTGCGCATTTTGGTGCGTGTCCGAAAAGGGATGATTCACTGCCGTATCAGTGTCCTTTATGCAAGAAGATTGCGACACGGAAGAATTCATATTTCCTTCATCTTAAGAACTGTCACTTTGAGCCTCGCTTGTCGTATGGGAAGACGTCACTGGAGTCCGAGGCGCAGGAGGTGCACGAGTGTAGGATGTGCTTTAAGAAGCTCGCGACACAAGAACTGCTCATTACGCATTTAGCTGCGCACATGTCGCATATAGAAGACAATGATACCGGCGCTGACAATGAATCTAGGACAAGTACCATCGAAGATGCAGCATCTATCCAATCAGTGCGAAGCCAATCCCACACTCCCAACAATCTTCTGAAATGTCCTAGGTGTAATAAAGAGTTCAAATACAAAAAATCTCTTCAAACACACGAAGCAAAATGTACTGCAGTAGAAGTGGAAGTGAAAGCCGAACCACCGGATAAAGCGTCCACGAGTTTATTGAGCGAGACTCCGGCGTACCGGCAAACCGAGTCAGAATCTAGTCAAGAAGAGGACGACAATACCTGTGACATCTGCGAGAAGCAGTTCTCGTATCGACGACTCTTACTCCACCACAAGAGGACCAAACACAACATGAGCTCAGGCCACAAGCGCGCCAAAATCTACCTCAAGGATTGCTCCGTTCGATGCCTCATCTGTGACATCGACATGAAGGTCGGAGCAATCAACGAACACAATCAAACTCATATCTCTAAGAATATGAAACCTAGGAACTTGTACACTTGCGCTGAATGCGAGGACACTTTCAAGAGTTGTTCTGCGCTCGCGAATCATATAAAGCTAATACACAGGCTAAAGCAGAAACGGATTGAAGATAGCGTAAACCCGTCGGATTTTTGTGAAGTCGTTGTGACAAAAGCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGAGAGGTTCCGGGCGAGACTAAGCCGCTAGTAGACCTCAGCGGCTTCACTTGTCCCATCTGTGCCAAGAAGATGCCGACTCTTATATCTCTGAAGCGGCATGTCAACTGGCACTCTAACGTTGGCAACAACATCCAGAAGAAGTATGAATGTTCCGTCTGCAATGAGGCATTCAAATTCCAATGCCACTACAAGCTGCACATGCGCGAACATTACCACGACACGAATCTAGATCCCAAACACCTGACGTGTACCATCTGCGGCCGTCGCAGTAAACATCTACGCGCCGCTCAGATGCACATGAAATTCCACAAACAAACTCGCTTCCAGAACAAAGACTATCAGTGCTCCATCTGCGAACGGGTCTTCCAATATAGGAAAGTATATCTCTCGCACATGGCCATACACTACAAGAAAGGCGACAGCGTACAAAACACTGTCGTAGGTTCCGCCTTACCCTTTAATGCCGATAAAGCTGTGTTCGACGGCACCAACACTTGCCATCTCTGCGGACAAGTCTGCGAGTCTGAGAACTCTCTCAAACACCACTTGATCTGGCACACCTCGAAGACATTCTTATACGGTGCTCGACACGAGTGTGCAATTTGCAAAGTGAAATTTACCAACAAAAAAAGATTAGAGATACACACCAGAGCTCATTACGAAGACGAAAATGGCCCCTATAAGTGTACTATTTGCGGCAAAGGGTACACAGACGAACGTTACTTCCAAAAGCATGTCAAAGGACACAACTTCGATAATCAGTCTCACAAAAAAAGAATAGAGAAGTTACGAAAGGATAAAGTTAAGTGTCCTATATGTACGCGGTATTACCCAGACTTGGTGAAACTCATCCGCCACTTGAGGAGGACCCATCCTGAAAGTAAAATGATCAAATCAGACCCTGATGCTCCACCTCAACCATACTTTTCGTGCAAGTTGTGCGCCAAAGTGTTCTTAGATGAGCGAAGATTACAACACCATGAGGAAGCTCATCTAAGGAAGCCAGAATTCTTCAAATGTAAGTTCTGCGGTAAGAAAACAATATCTCTAAAGAATCATAACATTCACATCAAGGGTCATTTGACGCAGAAGCACCTTGACAACCCGCTGAAGTGCCCGCACTGCGAGGACACGTTTGTGAAGGGCTACGACCTGCACTATCACCTGCGCGATGTACACGACATCAACGAGACTTGGATCGCAGAGCGCACGGAGGCTACTCTCAATGGACCCCTTAAAGATCTGCAGTGTTCCATTTGCTTGAAAGTCCTGGCAAGTAAAGGAAACTTCGAGCGCCATATTGACTATCACAACTCATTGAGATGCAACTACTGCTTCGATTACTTCAGTTCTCTCAGGTTTCTAGAAGGACATCTAGCGTTCTCGTGCGATAAGAAAAAACTTTTAGGTGACACAGAAGTTTATCCTAAAAAAGTGAAATGTAATATTTGTTACAAGGCATTCCATGTTCAAGTGAAACTAGACTGTCATTTGCGCGTACAACACGGTATCATAGTCAATAGGGAAGCCTCTACAGGAAAACAAGAACTCGTCTGCGATTACTGCTTTAGAGTTTTCGAAAATGAATATGCTTTGAGTACCCATAAGATATACCATCGCACTGTTGGCTATTACGGGTGCATTTATTGTAAAAAGAAATTTAACACAATGACCTTATATCGAAAACATAAGAACCACCATTTCTCTACACTGAACGTGGACAACCCGACGAAATGCGAACATTGTGACGAAACGTTCGTCGCCTTTAGAGAAATGATATATCACATGAGAGATGTGCATGGAGATGACAAGGAATGGGTGGTCGAACCCAAGGAATCCATCGAGGAAACATGCAATATATGTAATAAAAGATTCTACAATCTGCATAGACATCTGGTATACCACGAAGAAAACAAGTGCAAGAAATGTAATGAATATTTCTACTCTAGAATGGACTTTGATAATCATCTTTGCGCCATTGAGAGTGACGACGAAGGTGCTGAGTACGTAGCTACTGACGTGCCTAAATATGAAGAGTGCCCATTCTGTTTCAAACCAGTCACGAGGAAAACATCTTTACTTAAACATAGTCAGATACACAAGGGTTCCGGCTCTATATCCTGTAGGTTCTGCCCACTCAAGTTTAAAACTATGGACGCGTTTAACATTCACGCCTTCTCACATCGAAGCAGAAAATACAATAAGAAACCGATAAAATGTCGGATATGTAAAGAGAAATTCATTAGGTATGGTCCATTTATAAAGCATATGAAAGTAGTTCACAAATCTTTGAAGAAGGTACACTACAGGGCAGTCGTAAAGCCTGATAAATGTGTCGTTTGTGGAGATGAGTTCCCTAATCTTCACAATCATTACCGCGCTCATTTGTTGAACCAGTGCCAAGCTTGCCGCAAATACTTCACTTCGTACAAGGTGTTTTCTATGCATGAGTGCGACAAAGAGGACTCTGATCCTTCCAAAGTATTTATTTGTAATGAAAACTTGAACGAGCTGATTAACACATATGTTCCGAAAGATGAGAAGGATGATGAGAAATACTATGGCCACAGCGAAGAGGACGAGGACGAAGATGAAGTCGATCCACAGGTGTTAGCACAAGAAGAGGAGAGTCAAGAAAGTCAGGATAGCCAAGATACTAAATATGTTCCTCCAACTCTTCAGTCGCCCATAATTTCGGATGTTCTGTCACTTTTCAAGAAAGAAACTAGTGAGACAAATGGTATTGATGATGATGTAGTCAATCTATCTGACGATGATTCGATCGGCATTAATGAGAATGTGCCAATTGTCATTATTGATGATGACTAG
Protein Sequence: MALKLGKCRLCLKLLLGDFYSIFTVDNALQLAEMAMECARVKIYDGDGLPDKVCTECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPSSTIEEKISPANRSRKRSMDSVDNASTGGASGDYKPSVSKRVEELRRSQKRPRKQSGNISQLDSDYDNEDTSASYLGETDSDEPLLKTSYNCDICNRKFPSPRSLAVHKRIHDKKESLIENAVVDIPETNTEDATDSDDKLNCDKCGKTFKLKIMLKRHHDLCGQTSTPKTSPQKELLVSIEPIDGMKNRNIECEMCGAKFKAVDNLAKHMRVVHAAILKKEDKRANGKVSVPCLYCHTLFDDYYIHSAHFGACPKRDDSLPYQCPLCKKIATRKNSYFLHLKNCHFEPRLSYGKTSLESEAQEVHECRMCFKKLATQELLITHLAAHMSHIEDNDTGADNESRTSTIEDAASIQSVRSQSHTPNNLLKCPRCNKEFKYKKSLQTHEAKCTAVEVEVKAEPPDKASTSLLSETPAYRQTESESSQEEDDNTCDICEKQFSYRRLLLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDIDMKVGAINEHNQTHISKNMKPRNLYTCAECEDTFKSCSALANHIKLIHRLKQKRIEDSVNPSDFCEVVVTKAEPLDWIQSHNDFGEVPGETKPLVDLSGFTCPICAKKMPTLISLKRHVNWHSNVGNNIQKKYECSVCNEAFKFQCHYKLHMREHYHDTNLDPKHLTCTICGRRSKHLRAAQMHMKFHKQTRFQNKDYQCSICERVFQYRKVYLSHMAIHYKKGDSVQNTVVGSALPFNADKAVFDGTNTCHLCGQVCESENSLKHHLIWHTSKTFLYGARHECAICKVKFTNKKRLEIHTRAHYEDENGPYKCTICGKGYTDERYFQKHVKGHNFDNQSHKKRIEKLRKDKVKCPICTRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPQPYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHNIHIKGHLTQKHLDNPLKCPHCEDTFVKGYDLHYHLRDVHDINETWIAERTEATLNGPLKDLQCSICLKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLLGDTEVYPKKVKCNICYKAFHVQVKLDCHLRVQHGIIVNREASTGKQELVCDYCFRVFENEYALSTHKIYHRTVGYYGCIYCKKKFNTMTLYRKHKNHHFSTLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWVVEPKESIEETCNICNKRFYNLHRHLVYHEENKCKKCNEYFYSRMDFDNHLCAIESDDEGAEYVATDVPKYEECPFCFKPVTRKTSLLKHSQIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRICKEKFIRYGPFIKHMKVVHKSLKKVHYRAVVKPDKCVVCGDEFPNLHNHYRAHLLNQCQACRKYFTSYKVFSMHECDKEDSDPSKVFICNENLNELINTYVPKDEKDDEKYYGHSEEDEDEDEVDPQVLAQEEESQESQDSQDTKYVPPTLQSPIISDVLSLFKKETSETNGIDDDVVNLSDDDSIGINENVPIVIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00785388;
90% Identity: -
80% Identity: -