Ppyg004419.1
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- -
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000030.1:644395-646737[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.014 10 6.5 2.8 18 43 9 31 6 32 0.94 2 18 0.98 6.9e+02 0.6 1.6 17 26 36 45 32 60 0.76 3 18 0.00038 0.27 11.5 0.1 18 43 68 90 63 91 0.94 4 18 0.00048 0.34 11.2 0.9 17 43 98 121 95 122 0.87 5 18 0.00046 0.33 11.2 1.5 18 44 129 152 127 152 0.94 6 18 6.5e-05 0.046 13.9 1.3 15 43 157 182 153 183 0.89 7 18 0.0034 2.4 8.4 0.3 17 44 188 212 184 212 0.89 8 18 0.17 1.2e+02 3.0 0.1 16 43 218 242 213 243 0.83 9 18 0.075 53 4.1 2.1 3 43 291 326 284 327 0.85 10 18 2.2 1.6e+03 -0.6 0.1 17 26 333 342 328 351 0.76 11 18 0.41 2.9e+02 1.8 0.1 14 26 359 371 355 379 0.84 12 18 0.076 53 4.1 6.1 14 43 404 430 398 431 0.87 13 18 1.2 8.6e+02 0.3 8.3 6 29 425 448 421 460 0.70 14 18 2.4 1.7e+03 -0.7 12.9 13 43 461 488 453 518 0.80 15 18 0.63 4.4e+02 1.2 1.0 18 28 525 535 521 548 0.82 16 18 2.7 1.9e+03 -0.9 0.6 19 43 556 577 551 578 0.75 17 18 0.00014 0.098 12.9 2.1 6 43 607 643 605 644 0.80 18 18 2.3 1.7e+03 -0.7 0.5 13 29 659 675 652 703 0.75
Sequence Information
- Coding Sequence
- ATGTATCCAAACACATTAGACTTTGTGTGTGACTATTGCTCTAGAACATTCACAAGAAAATACAATCTACAAACTCATATAGAAAACTGCCACATCAATTCCTCATGTCACTGTAACATTTGCGGCCAGAATTTCGGTAGTCCGGCTGGCTTACAACTACACGTGTCTAGAGGCCACAATAACTATAACCAACCATTCCCTGAATGCGAATTATGTGGTCGCATCTTCACGAGAAAGCAAAATATTATGTCCCATATGATCACCGTTCATTTACAAGGCTTGGGTTCTGAAGTACGTTGCAGGTTATGCGAAAAAACGTTTACAACGGAACGGAATTTGAAAAGGCATGTAAATTTACTGCACAATCCTGATGTTGAGTACCCTACATGCAATGATTGTCACAAGATCTTCAAAGGAAAACATTCTTTGATCGCTCATATTCAATCGGTACATAATGTGACTGAGAAAGATGCTATACGGTGTCACCTTTGTGAGAAAGTGTACACAAATAATCGAAATTTGAAAAGACACATTGAGATGTTTCACGGTGAAAAAGGGGAATTCCGTTGCGATATTTGTCCTAAAGTTTACACGTCGAATCAAAGTTTGAGACGTCACGCGAGAACTAGACACAGTACTGAGAACCAGGAAGCGTTAACATGTCCCTTTTGCTCCAAAGTCATTCTTGGTAGAGAAAATTTTGATAGCCACATACAATTCCACCACCAAGACATTGAAACAGATACTAAAATGTCCGAATTCGTATGCGATTCTTGCGATAAATGTTTCGAGGAAGAGCCTTTTTTACGCCAACATGTGAAATTGGAGCATTCATTCAAGACTTTTTACAAATATTGCAAGAAATCTTTATTAAAACAGTATGGGATGGATCATAAACAGAATGTCTATAACTGTGAATTTTGCAGAAATTCTTTTACTACCGTCTACGAATTAAAAGACCATATGAGAGTGAACCATGACACGGAATACTCTCTTTGGACCTGCAATGTCTGTTTCAACAGGTTCTTCAGTAAAGAAACAATGTCGGCTCATAAAAAAGTCTGCCTACCGCCATCCAACGTAAATTCCTGCAGCCACTGCGATAAGCTATTCACAGACATATCCAGTTTGGAATTTCATAGCCGAATTTTTCACCCGCAAGCTCAAATAGCAGATTCAAACATATCTTCAACAAATATAGATGACGAAGGGAATTCTTTTAAGTGTAAACATTGTAACAGAATGTACTACAGCGACAGATCTTTAAAACATCATATAAAGCTTAAACACACGACCGACGAGGAGGTAGAATGTGAATTATGCGGAAAAATATGCAGCAACAAATATTACTTGGCGTCCCATATCAAAATAGTTCATAATAACGATTCCTGGTCGAGATGCGAGTATTGTGACAAGCAATTTAAGTCCAAAAGGAATATTCGGAGACACATTGAGTACACACATCTAGGGATGCAAAGACATAAGTGTATTGAATGTGAGACCCTGTTTAAAGAGAAAAGGAGTCTGCGAAAACACGTAAGAACAAAGCACCCTAATTCAACTGCATTCCCTCAATGCCATATTTGTCACAAGAGGTTCGAATCGGCGAAGTCTTGCAAGATACATCTCAAATTGCTTCACTCTTTTAACATGAACACGTATCCTTGCCATCTATGTTCAGTCTCATTCAGCTCAAACGAAGCCCTCTCTATACATTTAGAAACCAAACATCTCGCAGAAGATGAAATATACAAATGCGAGGAATGCAATCTCGTTTTCAAAGGGCAAGAAAAATTTGACAATCACAACGATATTTGCCATGTGAATTTAGTCCCTAATATCAAGCAAAAAGTTCTACCGAGATGTATTCTTTGTATGAAAGATTTTAGTACGAGAAAAACGCTGAAACGTCACATCAAGAAGTTCCACGACGATTTTGATGTCGACGAGTTAGCAACTTTTGGTTCTAGGAAAAGGAACTTCTCAGTTGAATGCGAAGACTGTATCAAAAACTTCAACGACGAATACTACGTAGGGGTCTACAATAAATTAAAAAACATGCGCGATTCTGTCATTTTCAAATGCGAGTCGTGTTTTAATTCTTACAGTTGTCTCGAATATGCGATACAGAGATATAAGCTGACTAATTCGGATGCTAATAGAAGTAAAATGATTTTAAGTGAGCTTTGTACTACTGAAATGAGTGAGGAGGAGACTGATTTCTCCAGTTTCGGAGCTCTACATGATATGTTACCTGAGAGTACGACGGGAGATATCAAATTAGAGCCCCTCGATGACATAATATCCGGAAATGATATAAAAATGGAACCGTCTTCTCCTTGA
- Protein Sequence
- MYPNTLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLQLHVSRGHNNYNQPFPECELCGRIFTRKQNIMSHMITVHLQGLGSEVRCRLCEKTFTTERNLKRHVNLLHNPDVEYPTCNDCHKIFKGKHSLIAHIQSVHNVTEKDAIRCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHARTRHSTENQEALTCPFCSKVILGRENFDSHIQFHHQDIETDTKMSEFVCDSCDKCFEEEPFLRQHVKLEHSFKTFYKYCKKSLLKQYGMDHKQNVYNCEFCRNSFTTVYELKDHMRVNHDTEYSLWTCNVCFNRFFSKETMSAHKKVCLPPSNVNSCSHCDKLFTDISSLEFHSRIFHPQAQIADSNISSTNIDDEGNSFKCKHCNRMYYSDRSLKHHIKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALSIHLETKHLAEDEIYKCEECNLVFKGQEKFDNHNDICHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHDDFDVDELATFGSRKRNFSVECEDCIKNFNDEYYVGVYNKLKNMRDSVIFKCESCFNSYSCLEYAIQRYKLTNSDANRSKMILSELCTTEMSEEETDFSSFGALHDMLPESTTGDIKLEPLDDIISGNDIKMEPSSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_01260333;
- 80% Identity
- iTF_01260333;