Ppyg005223.1
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- -
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000035.1:7073546-7075714[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 1.3e-07 31.4 0.1 1 45 12 55 12 55 0.93
Sequence Information
- Coding Sequence
- ATGCCTCCAATAAAGGGAAAAATGTTCAGTTATTCCGAAGAAGATATGATGAAAGCATATAATGAGGTAAAATCTGGGACATCAATATCCGCTGCGTcaaaaaaatataatattccttatagcactctttcatataaagtgcatggaaaaacacctcttgaacgccgaatgggtccagtatcatatttatctacagtgcaagaagatgtcattgttttatggatcttagagatggctaaagctggatttcccgtaactgtgcagcagttgcaagacagtgtatgcaagctagtgactgaattaaaaattgaaactccttttaaaaataacagacctgggagacactggtatgaatcttttcaaaaaagacacccagagattagcttaagaacatcccaaaatttaacagaacctagagctgctgttactaatgaagcattaagcaaatggtttgcggaaatttcgaaattcttcgaagaaaaaaatttagaagctgtcatccgggacccaaagagagtgtttaattgtgacgaaaccgcctttttccttaatcctaaaggtaataaagtgttagcagcaagaggcaataaaacagtttatcagaaagtcaatgctgatgaaaaggagtgccttacagttcttctgaccggaaatgcagcgggtgatctgccacctcctatgattgtatatcaatatgcgagaattcctagagatttggctcttagcgtaccaaaaaactggggtattggacgttcagagaatggctggatgacgggtgaaacgttttttgagttcattgcgaatatttttaatccatggcttaacgagaacaatatcgaaaagccagcggtattattcatcgatggacacacttcacatttgacactacaaaccagcaagttttgctctgaaaatggtattgttcttgtagcattgtaccctaatgccacgcatttaatacaacccatggatgtttctgtatttcgtaccttaaaatcagcctggaaaactggtgtccaaaattggcgtttacagaacatggacaatcctagactcagaaaagtacactttgccccactcttggaacaagtcctggagaagactttaaaaaaatctctcttcgaaaatggtttccgaaaatgtggactatgtccatggaatTTAGAGGCAATACTTCAGCCAACGTTAAGAAATAATACTTTGATAGAAGATCAAAACAAATCTCTAAAGGAATTGAGAGAGGGGTTTGCTTTCGTTGAAAAACATATTGGACAGGATAAACTAATAACTTTCCGAAATACCAAAGAATGGACAGGAGACATCCAGGATCAATCACTTTTTGAATTTTGGAAGAATATCAAGAATAAGCATGACGTACTTTTGCAATCAGTGTCTTCAAACTATGATCAAAAAGTTATTCAGACTGATGAACAAGAAAATTTAACTGATGACAACAATAAAGAGAATTGTAGTATTGCAGAGCTAAATTCAGAAGTTTTTGGGGAATTAGAAGGTTTATTAACACCTTCTCTTGAGACTAACAACTTTTGGAATTCATCAGAAGTGACAGAGGTTTTGAATAATTTAAATGTAATGGGAAAAGATAAAATAACACCAACCAACTCTATTTGTGACACAGATAAAGAACAAACAACTGAAATTATTGTTAATCCGCAGCCATTTGCCCTTACGTCTCCTGTCGTCCAGTCGTCTCTCCCCTTAAGTCCTACACAGCCAATAGCATCAACTAGCACAGCAAAACCTATTATTCCTACACCATTTAAAAAGTCTTTATTTTGGCCAAAAGAAAAGGAAAATAACAAAAAGAAGAGAAAAACTGAGAAAGTACCTGCAGTAATCACATCAGAAAAGTGGCAAGAGTACCATGAAAATAAAGCGAAAAAAAAGCTTGAACAACTTGAACAGAAACAGAAAAGGGCTGAAGAAAGAAAAAGGAAAAAGCAAGAAAAAGAAGAAGCTAACAAAAACAAAAAAAACAAAGGTCGTGCAAAGAAGACTGAAAGAAAAAAAGAATCTACTTCTATAAAAAAAGTCACAAAGATATTGTTTGGTTCAAGTAGCGAATCTGAATGTGAAACATGGAAGCCTTCTGGTGGTAGTACAGATGATCTCAATAGCGATGATACTGATGATTTAAATATTTTTTAA
- Protein Sequence
- MPPIKGKMFSYSEEDMMKAYNEVKSGTSISAASKKYNIPYSTLSYKVHGKTPLERRMGPVSYLSTVQEDVIVLWILEMAKAGFPVTVQQLQDSVCKLVTELKIETPFKNNRPGRHWYESFQKRHPEISLRTSQNLTEPRAAVTNEALSKWFAEISKFFEEKNLEAVIRDPKRVFNCDETAFFLNPKGNKVLAARGNKTVYQKVNADEKECLTVLLTGNAAGDLPPPMIVYQYARIPRDLALSVPKNWGIGRSENGWMTGETFFEFIANIFNPWLNENNIEKPAVLFIDGHTSHLTLQTSKFCSENGIVLVALYPNATHLIQPMDVSVFRTLKSAWKTGVQNWRLQNMDNPRLRKVHFAPLLEQVLEKTLKKSLFENGFRKCGLCPWNLEAILQPTLRNNTLIEDQNKSLKELREGFAFVEKHIGQDKLITFRNTKEWTGDIQDQSLFEFWKNIKNKHDVLLQSVSSNYDQKVIQTDEQENLTDDNNKENCSIAELNSEVFGELEGLLTPSLETNNFWNSSEVTEVLNNLNVMGKDKITPTNSICDTDKEQTTEIIVNPQPFALTSPVVQSSLPLSPTQPIASTSTAKPIIPTPFKKSLFWPKEKENNKKKRKTEKVPAVITSEKWQEYHENKAKKKLEQLEQKQKRAEERKRKKQEKEEANKNKKNKGRAKKTERKKESTSIKKVTKILFGSSSESECETWKPSGGSTDDLNSDDTDDLNIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00383564; iTF_00383565; iTF_00383566; iTF_00383567; iTF_00383568; iTF_00383569; iTF_00383576; iTF_01361544; iTF_01361542; iTF_01361543; iTF_01361545; iTF_01361541; iTF_00842608; iTF_01076415; iTF_00637551; iTF_00636303; iTF_01166635; iTF_00636304; iTF_00072690;
- 90% Identity
- iTF_00383564;
- 80% Identity
- -