Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000472.1:150806-163280[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.22 12 6.8 2.2 1 20 274 293 274 297 0.77

2 14 0.013 0.72 10.7 4.4 1 20 307 326 307 329 0.94

3 14 2.4 1.3e+02 3.6 0.6 1 23 336 358 336 358 0.88

4 14 0.00065 0.035 14.8 0.2 1 23 364 386 364 386 0.97

5 14 0.013 0.69 10.7 3.6 1 23 392 414 392 414 0.98

6 14 0.46 25 5.8 2.5 1 23 608 631 608 631 0.96

7 14 9.8e-05 0.0053 17.4 2.6 1 23 641 663 641 663 0.99

8 14 2.5e-05 0.0013 19.3 0.2 1 23 696 718 696 718 0.98

9 14 0.0065 0.35 11.7 5.4 1 23 724 746 724 746 0.98

10 14 0.43 23 5.9 0.3 1 11 749 759 749 762 0.91

11 14 0.0021 0.12 13.2 1.2 1 23 917 940 917 940 0.95

12 14 0.004 0.21 12.3 4.1 1 23 950 972 950 972 0.97

13 14 2.5 1.3e+02 3.5 2.1 1 23 978 1000 978 1000 0.95

14 14 0.0045 0.24 12.2 0.5 1 23 1006 1028 1006 1028 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.22	12	6.8	2.2	1	20	274	293	274	297	0.77
2	14	0.013	0.72	10.7	4.4	1	20	307	326	307	329	0.94
3	14	2.4	1.3e+02	3.6	0.6	1	23	336	358	336	358	0.88
4	14	0.00065	0.035	14.8	0.2	1	23	364	386	364	386	0.97
5	14	0.013	0.69	10.7	3.6	1	23	392	414	392	414	0.98
6	14	0.46	25	5.8	2.5	1	23	608	631	608	631	0.96
7	14	9.8e-05	0.0053	17.4	2.6	1	23	641	663	641	663	0.99
8	14	2.5e-05	0.0013	19.3	0.2	1	23	696	718	696	718	0.98
9	14	0.0065	0.35	11.7	5.4	1	23	724	746	724	746	0.98
10	14	0.43	23	5.9	0.3	1	11	749	759	749	762	0.91
11	14	0.0021	0.12	13.2	1.2	1	23	917	940	917	940	0.95
12	14	0.004	0.21	12.3	4.1	1	23	950	972	950	972	0.97
13	14	2.5	1.3e+02	3.5	2.1	1	23	978	1000	978	1000	0.95
14	14	0.0045	0.24	12.2	0.5	1	23	1006	1028	1006	1028	0.97

Sequence Information

Coding Sequence: ATGTCTGTGGACTTTCTACATTCTTCATCATCGCCACCACTAAAACGCATGCGGGATTCATCATCAACTTTACCAACAATTTTAAATActaaatgcggtgaaatatttgttaactccaactgggacaagtggtcatttaattgtgcattttgtcaaaagaccactagtgatattggtgtttttatttgccacatacgattacaacatttgaatgATAAACACATTTCAAATGAATTTGAAAGTTGTATTAATAACTCGGCAACAAATGATTCCTCTATAACACAAACAAATATATTTTCAAGCAGTGAGGAACATTCTACAAGTAATGCCCCACATCAAACTGCAGCCAATACGCTCACAACTAATGCAGAACTTTTACCTTCTATAGTAGTCAATTCAGGGATTATAACTACAAAAGTTTCAAAAATTATAAATTTAGAAACATTAACTGATCCGCCGGAGGGTAGTGATAAACTGGAGGATATCAATTCTAATAAGAATTCCATTACGACCAATACACAATATTCGAACGAAACTAATGAGGAATTTTTAGCCTTATCATCAATAGAACAAGAATCACAACAGCAGGAGCCGCAAGAACAACAAATCATTCAAGTTGTTTATAACGGCGACGACGAAGACTATAACGAATTCGATACCAAACATCTAGATATTGAAAGCTATTTGGATTGTTACCTAAATGACAACGATTATAATTCAGAATCTGATCATGATGAGATGTCAAATGACGATAATGTTGCTGGTGTTAGTAGAGCAAAAAAACCAAAGTCAGTTAAAAATAAAAAGGATTCATATACTCACGAATGTCCAAATTGTGATCAAAAATTCAAATCTAAACAGGGTGTATATTTTCATTATTCTACAATACATGATAAAAATTTACATTTACGTTTGCCGCACAAATGTAAAATCTGCAAAAGAGGTTTTAAAACTGTTTCAGGCTTAAATACTCATAAAATATGTCATGACAAAAAAAGGAAACAATTTAAATGTCCCATTTGCTCGTCAATACAATATCGTGAATATGTGTTTCTTAATCATATACAAACACACGAAACTAGTAAGTGTTTTCCTTGTCAAGTCTGTGGCAAAGCATTTAATACAGATGCTGAACGTATGAAACATTGGAAAAGTCACGCTAAAGAAAGGCCTTATGCCTGTAAATTTTGTTTTCGTCGTTTTTATAAAGAACAATATTTAATACAACATTTAAAGAGACACTGTGAATATAAATGTTATTTTTGTCCCATAACATTTCAAGCAGATGAACATCAAAAAGTTCCCTACGTTTGTCCTAGTTGTCAACAAATGCCCGACATAAATGAAAAGGTACAACATATACGAAATTTACAAAATTCGTCTCATGTATTTGAGTCGGATGATGAGGAGGAAAACGTCATACCATCAGCAAAACCATTTGGGATAAATACGAAAGAATTTCCAGAAATAATACCGAAGAAGGAACCTGAAGAATCTTTAGAGTTAATACCAAAAGAAGAGCCACAATCGTTAGAGGAAAAAGAAAAGGTTAAAGAGCAAGAGAAAGAAATAAAACATATATTTTATATAAACAAGGATAGCCATAATGATGACGATACACCTAACACTGACAGTGATAATTGTTCTGATGATGTTTCCTATAAAGTTGATAGTGATATTTCTTCTTCTGATGATTCTTTAACAGACGATGATGATAATTCAAATAAAAATATCATATCTTCGCAAAAAAAGACAAGAATAGCTCAAGATAACAAATATCGACAAATTCCTGATAAGGAAAAACCCTTATGTCCGGCATCATATAAATGTAAAATTTGTAATTTACAAATCTATTCTAAACATATATTAACTTATCATATGTTAAAAGTTCATGGCGAAAAATACGATGAACCAACAATGTATACATGTCGTTATTGTCAAAAAACTTATAGAAGTGTTAATGGTTTAACAAATCATCTAAAAACTCATAATGACAAGAATTTCATACAATGTCCCGTTTGCAAATCAAAATATTTACAAAATTTTTATGTCAATCATGTATTAACACACGAAAGTAATATATGTTTTCCTTGTCAAGTCTGTGGTAAAGTATTTGCTAGTAATGAGGAACGTATAAAACATTGGAAGACACACGCCAAAGAATTTCCATATTCTTGTGAATTTTGTTATCGTCGTTTTCGTAAAGAACAATATTTAGTACATCATTTAAAGACACACTATCAATATCGTTGTAATTTTTGTGGTCAGGTATTCAATGCAGAACAATCTCAAAAATCTCCCTATGTTTGTGGTAATTGTAGGGAGAAACCCAATGTTAAGAGACAAGTTGTATATGAAAGATCAGCAAAGGGTTATTCAGCAAATAATTCTAACAACATAATTACAAACGATTTTTTTGCCATAACAAATTTAGGCGACCAGGAAAATGAGCAAGAAAATAAAAAAGAAATCATAGAAGTCGTTTATATAAACGACGATGAAGAAACTGGTAATAAAGATAGAGAATTTATTATCAACAATGATAGCACGACTAACGATGCTGATGAGGTAGAACCAGATAATGTTTCTGAAACAGAATCAAATTATATACCCAGTAGTGGTGAAGAAGAAGATGAGGACGAGGAGGAGGAAGAACAGAACAATGAACTCCAATTTAATACCGGAGTAGGAGTAGTAGCCAGTACTAGTAATACTAATATATTTAAGAATTACGTACGTAAATATCCCTTCCAATGTCAATATTGTCCCAGAGATTTTAAAAGTCAACGTGGTGTAAATTATCATCAATCTCAAGTTCATGATGAAAAATACGCTCGAAAATTACGCCACAAATGTAAAAAATGTGATAAAGCCTTTCAAACATTTCAAGGTTTATTGGCTCACAAACGTTTTCATGATAAAGATTGTCATTTTAAATGTCCCGTATGTCCGGTAAAAAATCATGTAGTATCACATTTTCTAAAACATGTTATGACGCATAAAAGTGATACCTGTCATCCGTGTCAGGTGTGTGGTATAGTATTTAGCACCGATCAAGAGCGTTTGAAACATTGGAATACTCATGCCGAAGAGTTACCCTATGATTGTGATGTGTGTTCGAGACGTTTTAGAAAAATGCATATATTAACACATCATAAAAAATGTCATGGACAATATAATTGTTATTTTTGTCCTGCAATTTTTAATTCCAAACTAACTTTACATCCACCCTATGTTTGCCCCAGTTGTGAAAAAGAGCCGGACATCAAGCAAAAAGTGGAATTTCAAAGATCATTGGCGGAAAAGAAGCATGTTTTTGATTCAGATGAAGAGGAATAG
Protein Sequence: MSVDFLHSSSSPPLKRMRDSSSTLPTILNTKCGEIFVNSNWDKWSFNCAFCQKTTSDIGVFICHIRLQHLNDKHISNEFESCINNSATNDSSITQTNIFSSSEEHSTSNAPHQTAANTLTTNAELLPSIVVNSGIITTKVSKIINLETLTDPPEGSDKLEDINSNKNSITTNTQYSNETNEEFLALSSIEQESQQQEPQEQQIIQVVYNGDDEDYNEFDTKHLDIESYLDCYLNDNDYNSESDHDEMSNDDNVAGVSRAKKPKSVKNKKDSYTHECPNCDQKFKSKQGVYFHYSTIHDKNLHLRLPHKCKICKRGFKTVSGLNTHKICHDKKRKQFKCPICSSIQYREYVFLNHIQTHETSKCFPCQVCGKAFNTDAERMKHWKSHAKERPYACKFCFRRFYKEQYLIQHLKRHCEYKCYFCPITFQADEHQKVPYVCPSCQQMPDINEKVQHIRNLQNSSHVFESDDEEENVIPSAKPFGINTKEFPEIIPKKEPEESLELIPKEEPQSLEEKEKVKEQEKEIKHIFYINKDSHNDDDTPNTDSDNCSDDVSYKVDSDISSSDDSLTDDDDNSNKNIISSQKKTRIAQDNKYRQIPDKEKPLCPASYKCKICNLQIYSKHILTYHMLKVHGEKYDEPTMYTCRYCQKTYRSVNGLTNHLKTHNDKNFIQCPVCKSKYLQNFYVNHVLTHESNICFPCQVCGKVFASNEERIKHWKTHAKEFPYSCEFCYRRFRKEQYLVHHLKTHYQYRCNFCGQVFNAEQSQKSPYVCGNCREKPNVKRQVVYERSAKGYSANNSNNIITNDFFAITNLGDQENEQENKKEIIEVVYINDDEETGNKDREFIINNDSTTNDADEVEPDNVSETESNYIPSSGEEEDEDEEEEEQNNELQFNTGVGVVASTSNTNIFKNYVRKYPFQCQYCPRDFKSQRGVNYHQSQVHDEKYARKLRHKCKKCDKAFQTFQGLLAHKRFHDKDCHFKCPVCPVKNHVVSHFLKHVMTHKSDTCHPCQVCGIVFSTDQERLKHWNTHAEELPYDCDVCSRRFRKMHILTHHKKCHGQYNCYFCPAIFNSKLTLHPPYVCPSCEKEPDIKQKVEFQRSLAEKKHVFDSDEEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -