Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000739.1:31081-35777[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.2e-07 2.3e-05 24.8 3.3 1 23 306 328 306 328 0.98

2 8 2.6e-07 1.4e-05 25.5 4.3 1 23 334 356 334 356 0.98

3 8 0.0005 0.027 15.1 3.0 1 23 362 384 362 384 0.98

4 8 0.00013 0.007 17.0 3.2 1 23 390 412 390 413 0.95

5 8 0.00016 0.0084 16.8 1.3 1 23 426 448 426 448 0.96

6 8 5.9e-05 0.0032 18.1 5.2 1 23 514 536 514 536 0.99

7 8 0.43 23 5.9 0.3 2 23 546 568 545 568 0.91

8 8 0.39 21 6.1 0.2 1 23 570 593 570 593 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.2e-07	2.3e-05	24.8	3.3	1	23	306	328	306	328	0.98
2	8	2.6e-07	1.4e-05	25.5	4.3	1	23	334	356	334	356	0.98
3	8	0.0005	0.027	15.1	3.0	1	23	362	384	362	384	0.98
4	8	0.00013	0.007	17.0	3.2	1	23	390	412	390	413	0.95
5	8	0.00016	0.0084	16.8	1.3	1	23	426	448	426	448	0.96
6	8	5.9e-05	0.0032	18.1	5.2	1	23	514	536	514	536	0.99
7	8	0.43	23	5.9	0.3	2	23	546	568	545	568	0.91
8	8	0.39	21	6.1	0.2	1	23	570	593	570	593	0.90

Sequence Information

Coding Sequence: atgATAACAGAAGAAGATAATTTGCCTAAAGCCATATGTTCTAAATGTACAGCACGATTAAAAATCGCATATACTTTTATAAAAACGGCACACGAGTCCGAAAATAATTTGAAACTATTTTTAACAAAAATTAGCACAGAATTCAAAGAAGTCACTCAGGGAAGTAAGTCCACAAATAAGTTACTCAATGAACAAAACCTTACAGAGGATGATCTTTTATCTCTTATGGATGATGGGAATCATGTCGATATTCTATCAGATGCAACTGTTAACGAGAAACGAAAAAAATTGATAAGTCCCGAAATAAACTTAAAAAAATACAAGACAGAAATAAAAGTCGAAAAATCAAAAAATGCTAAAGAAATTATAAAATCTGCGAAAGAAGATTTTGACAATTCTAAAAAAGATGAATCAGTTTATCATTTATCTAAAGATGTTTTACTAATACATGCCAATGATAATGAGGCTGATAATGGATATGAAAGCAATACACATTTTATGGAAATTCCATCCAATAATAATGAGGAAATGACAGAAAAAGAGCATTATAATGACGACATTCGGGAAGATCAGGGGGAGGAAAAAACATACAGTAGTATAAATGTGTTAGAGGTGAATGAAGAATCTGAAATCCATTTACAATCTACTGAATTAGCAATGGAAGAATCGGAAGAAATTCGCGATTACGAAACGATGGTTAACAGCCAAGATGATGCCATACAATATCAGAGTATTTATGTCGATGAATCGTCCATAGAAGAAGGTAATCAAAAGAATGATGATGACTATTGCATAAATAACTTGAACGAAGAAGAGAACGAAACGTATGAAAACCCAACTAATAAAGAAACTGTTAATGATCAAAGGGAATCAGTTAAAAAGTCATGTTCTAAAACGGAAATTATTGTGCATCGTTTTTATTGCGATAAATGCAATCGTGATTTTAGTACTAAAACAAATTTAAACCGTCATATGCAATCACATGAAGGTAATAAACCTTTTTCGTGTACGGAATGTAAAAAGAGTTTCACCCAAAAATCAACCTTGAAACAACACATGTATACACATACAGGTGAAAAACCTTTTGTTTGCGAAGTTTGTAACCGTGGATTTACCCAATGCAAAAGTTTAATATTCCACATGCGCCGGCACACTGGTGAAAAGCCATTTCATTGCGAATATTGTTTAATTACTTTCCGACAGAAGGATGCTTTAAGGATTCACATCATAAAACACCATGTTGTTATAGAGCAGACCATGGATGGCTGTGAAGTGTTTACATGTATTATATGCCAAAAAAAATTCGATACGAAAGTTGACTTTAAAATTCATATGAAGGTGCACACCGCACCGGCAGAAGTTGATAATGTGGTTGAATTATTGAGACATCAACAAGAGTGGCCTGGGTTGAGTAGAACAAAAAATTCAAGTGATTCTGGTAGATCAGATTTACTAATGCCTATTGTCTCTGAATGCCTTAATGCCGCGGTTGTAAACGTTTCTGCATCATCCGCCGCCGAGCCAAGTCGTGCAAAAAAATTTCAGTGTCGAAAATGTTTTAAATGTTTTGCATTGAAAAAAAGTTTAGTGCGACATATGCGTATTCATTACGTTAACAATGATGATGACTTAACAGAATGTTTCGATTGTGAATTGCAATTCTCCTCGACCGAGGTATATCAAGAACACCTTTCGGAATATCATCAATACGCATGCTCCGCTTGCCCTGAACAAGTCTTTAAAACTATTCAAGACTTAAAGATGCATATGTTCGAGCATGAATTGGATCAAGAAGAGCACTCACAATGA
Protein Sequence: MITEEDNLPKAICSKCTARLKIAYTFIKTAHESENNLKLFLTKISTEFKEVTQGSKSTNKLLNEQNLTEDDLLSLMDDGNHVDILSDATVNEKRKKLISPEINLKKYKTEIKVEKSKNAKEIIKSAKEDFDNSKKDESVYHLSKDVLLIHANDNEADNGYESNTHFMEIPSNNNEEMTEKEHYNDDIREDQGEEKTYSSINVLEVNEESEIHLQSTELAMEESEEIRDYETMVNSQDDAIQYQSIYVDESSIEEGNQKNDDDYCINNLNEEENETYENPTNKETVNDQRESVKKSCSKTEIIVHRFYCDKCNRDFSTKTNLNRHMQSHEGNKPFSCTECKKSFTQKSTLKQHMYTHTGEKPFVCEVCNRGFTQCKSLIFHMRRHTGEKPFHCEYCLITFRQKDALRIHIIKHHVVIEQTMDGCEVFTCIICQKKFDTKVDFKIHMKVHTAPAEVDNVVELLRHQQEWPGLSRTKNSSDSGRSDLLMPIVSECLNAAVVNVSASSAAEPSRAKKFQCRKCFKCFALKKSLVRHMRIHYVNNDDDLTECFDCELQFSSTEVYQEHLSEYHQYACSACPEQVFKTIQDLKMHMFEHELDQEEHSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01261337;
90% Identity: -
80% Identity: -