Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000116.1:290724-294230[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00084 0.045 14.5 0.6 2 23 174 196 173 196 0.94

2 19 0.0037 0.2 12.4 2.7 1 23 232 254 232 254 0.98

3 19 0.00098 0.053 14.2 0.5 2 23 292 314 291 314 0.94

4 19 0.72 39 5.2 1.0 1 23 320 343 320 343 0.94

5 19 6.5e-05 0.0035 17.9 1.1 1 23 350 372 350 372 0.97

6 19 8.4e-06 0.00046 20.7 2.0 1 23 378 400 378 400 0.98

7 19 0.0024 0.13 13.0 0.7 2 23 433 455 432 455 0.95

8 19 0.00029 0.015 15.9 1.1 2 23 492 513 491 513 0.96

9 19 0.0043 0.24 12.2 0.1 2 23 532 554 531 554 0.92

10 19 3.2 1.7e+02 3.2 0.8 1 23 560 583 560 583 0.87

11 19 7.5e-05 0.0041 17.7 1.9 2 22 590 610 589 610 0.94

12 19 0.0022 0.12 13.1 0.3 2 23 669 691 668 691 0.95

13 19 0.12 6.6 7.7 0.6 1 23 697 720 697 720 0.80

14 19 0.0073 0.4 11.5 0.8 2 23 728 749 727 749 0.96

15 19 0.0028 0.15 12.8 0.4 2 23 768 790 767 790 0.93

16 19 0.00034 0.018 15.7 4.7 1 23 826 848 826 848 0.98

17 19 0.0027 0.15 12.8 3.8 1 23 854 876 854 876 0.98

18 19 0.76 41 5.1 3.2 2 23 970 992 969 992 0.94

19 19 0.1 5.5 7.9 0.5 1 22 998 1019 998 1022 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00084	0.045	14.5	0.6	2	23	174	196	173	196	0.94
2	19	0.0037	0.2	12.4	2.7	1	23	232	254	232	254	0.98
3	19	0.00098	0.053	14.2	0.5	2	23	292	314	291	314	0.94
4	19	0.72	39	5.2	1.0	1	23	320	343	320	343	0.94
5	19	6.5e-05	0.0035	17.9	1.1	1	23	350	372	350	372	0.97
6	19	8.4e-06	0.00046	20.7	2.0	1	23	378	400	378	400	0.98
7	19	0.0024	0.13	13.0	0.7	2	23	433	455	432	455	0.95
8	19	0.00029	0.015	15.9	1.1	2	23	492	513	491	513	0.96
9	19	0.0043	0.24	12.2	0.1	2	23	532	554	531	554	0.92
10	19	3.2	1.7e+02	3.2	0.8	1	23	560	583	560	583	0.87
11	19	7.5e-05	0.0041	17.7	1.9	2	22	590	610	589	610	0.94
12	19	0.0022	0.12	13.1	0.3	2	23	669	691	668	691	0.95
13	19	0.12	6.6	7.7	0.6	1	23	697	720	697	720	0.80
14	19	0.0073	0.4	11.5	0.8	2	23	728	749	727	749	0.96
15	19	0.0028	0.15	12.8	0.4	2	23	768	790	767	790	0.93
16	19	0.00034	0.018	15.7	4.7	1	23	826	848	826	848	0.98
17	19	0.0027	0.15	12.8	3.8	1	23	854	876	854	876	0.98
18	19	0.76	41	5.1	3.2	2	23	970	992	969	992	0.94
19	19	0.1	5.5	7.9	0.5	1	22	998	1019	998	1022	0.91

Sequence Information

Coding Sequence: ATGGCACACAGCTTGAGAAGTTCTAAAAATCAGATAGATACAAGAAAAGAAGAAAATAGACTTAATGAAGAAACACAAAACAAAATTTCAACAACTATAGAATCGATTGATTTACCAATCGCTCCAAATGACCAAATAAAAAACGAATTCATGGAATTTTCAGAAGATACTGAAACAAATGTGGAAAATGAACCTTGTTTTTCGGATGGCACTAATAATTTACACGAAGAAGATGAAAGTCATGAAAAAAATAATGAAAATGATTTTACAACTATAGAATTAAATGATTTACCAATCGCTCCAAATGATCAAATTAAAAAAGAATTCATGGACTTTTCGGCAGAAGGTGAACAAATAGTAGAGACAAATATGAAAAATGAATCTTACATTTGGGATGACGCTGATTATTCCGACGAAGAAGATGAAAATCAAGGTAAAAGTAATGATTATTTTAATAACGTAGAAATCGAAAATGAGAATACCGACAACGACCAGGGAACATTTAATATTGTTGAAAATAAATGTGCAGTATGTGAAAAGAATTTTTCTTTTCAACGTGATCTTATTAAACATGTGCAAGAAAATCATCCTAGGGATAGAGCATTTAAGTGTAGATATTGCTTCACATTATATTCCAGCTTCAATTCAATGTGTTTACATCATAAAAAAATACATCCAAATTTGTCAAATATATATTCATGTGAATATTGTAGCAAGTCATTTTTTAAAAAGCCTTTATTTCTACTCCATAAACTAACTCATGCTGAATACGCAGGCAATAATGTTATGAATAAAAACATTGGTAATGATGACTCTAATGATATAAGTGATCAAAAAGAGGCTAGCAATACAAATATTAACCCAATTGATGATAAATGTGGAATTTGTAAAAAGAAATTTTCTCCTTTAAAGAATCTTGTTGAACATGTTAACCAAACTCATCCTAATGATAAGGCATTTAAATGTATAACATGTCCATTGTTATTTCCAAAAATAAGATATTTGCGTCGACATTACAAAGTAAATCATACCAAACGGCGTAGAGATTTTGCATGCGATATCTGTGGTATGACCTATTATAACATTACCCACTTGAAAAAACACCAACTAGTACATAAGAAGCTACTTCCGTTTTCTTGCAATCAATGTGATAAAATATTCGAATATAAATCGAATTTACTTGAACACAAGAAAACTCATTTGGGTGATAATAAGAGTAAAAATGCTTCTAATAACATTGAAATTAATAATGATAGCACTAATAACAATCAAACGAAATGTATTGAAATTGAAAATAAATGTGCAATATGCAAAAAGGAATTTTTTTCTCTTGAAGATCTTGTTAAACATGTTAAACAAACTCATCCTAATGATAAAGCGTTCAAGTGTCGATATTGTCCTTCACTATTTTCCAATTCACTTTCAGTATATCCTCATCTTAAAAGATGTCATGCAGATTTAGTAAATTTATTATCTTGTGACTACTGTAACAAGTCATATTTTACAAAGGATTTGTTAGATCGCCATAAACTAATTCATACTCATAATAATTCCAGTGATATAAGTGAACAAAAAAAGTATCCGATTGAAAATAAATGTGGAATTTGTAAAGAGGAATTTTCTCTTCAAGGAAGTCTTATTAAACATGTCATAGAAGCTCACCCTAATGATAAAGCTTTTAAATGTTTATATTGTTCAATGTTATTTTCAAATGTAAGATCTGCAGATACACATTACGAAATAAAACATATAGGAGGTATGCCACTTTCTTGCAATCAATGTGATAAATCATTCAAATATAAATCAAATTGGCTTAAACATAAGAAAACTTGTTTGAAAGACAATAATAAATCTTATGATCATAATAATGATCAAAATATTTCAACAAATGATGAGAATGAGGAAGAATACATTAAGATAGAAGTTATTGATACTGATAATAACATTGAAATTAGTAATGATAACGCTAATAACAGTCATAAAAGAGTTCTTGATATTGAAAATAAGTGTACAATATGTGAGAAGGAATTTTCTCTCCAAGTAGATCTTGTTGAGCATGTTAAACAAACTCATCCAAATGACAAAGCATTCAAGTGCCCATATTGTCCTTCACGATTTTCCAGTTCGCTTGCAGTGTATCCCCATCTTAAAAGATCTCATGCTGATTTAATAAATGTATTGTCTTGTGACTACTGTAGCAAGACTTATTTAAGAAAGGATTTATTAGATCGCCATAGATTAATTCATACAGATAGTATTTCCAGTGGGATAAGTAAGCCAAAAATGTATCAGATTGAAAATAAATGTGGAATTTGTAGAAAGGAATTTTCTCTTCAAAAAAGCCTTGTTAAACATGTCATACAGGCTCATCCTAATGAGAAAGCTTTTAAATGTCTGTTATGTCCAACGTTATTTTCAAAAATAAGATCTGCAGATCCACATTATGTAAAAAAACATTCTAAATTGCCTAAAAAATTTGTCTGTGATATCTGTGGTGTAGCTTTTTATAATAATTGTCATTTGAAATATCACAAACGAAAACATATAGGAATTAAACCGTTTTCTTGCAATCAATGTAATGAAGTATTCAGCTGTAATCAGAGTTTGCTCAAGCATTTAAAAACTCATTTCAGAGATAATGATAAATCTTATAATACCAATACTGTAGGAAAAAATCATATGGATGCAGAATATCGTGAAAATGATAAACAAAATCAATTTAATGAGGATAAAGACGATCAAATTCCGTCTTTAGCTAATAAGTGTAAGAACGATAATAGTAATTTATTGAATAGCGATGAATATTATGTGAGGGATGAACAAAGTACTTCAACAAATTTTAATCACGATAATGAAGATCAATATAAAATAACTAGGATTGAGGAAACAGCTGAATTAAGCCAAATTAAATGTGACGTTTGTGCAAAGGTATTTAAATGTAAACAATCTGTAGCCAAACATATACAACATTACCATCCTAAAATTGATTTATTCAAATGTCTTTACTGTGATGATTTTTTCTATAGTCTAGAATCATTATCACTACACATAACAGTCGTGAATCATTTACTTAAAAAATGA
Protein Sequence: MAHSLRSSKNQIDTRKEENRLNEETQNKISTTIESIDLPIAPNDQIKNEFMEFSEDTETNVENEPCFSDGTNNLHEEDESHEKNNENDFTTIELNDLPIAPNDQIKKEFMDFSAEGEQIVETNMKNESYIWDDADYSDEEDENQGKSNDYFNNVEIENENTDNDQGTFNIVENKCAVCEKNFSFQRDLIKHVQENHPRDRAFKCRYCFTLYSSFNSMCLHHKKIHPNLSNIYSCEYCSKSFFKKPLFLLHKLTHAEYAGNNVMNKNIGNDDSNDISDQKEASNTNINPIDDKCGICKKKFSPLKNLVEHVNQTHPNDKAFKCITCPLLFPKIRYLRRHYKVNHTKRRRDFACDICGMTYYNITHLKKHQLVHKKLLPFSCNQCDKIFEYKSNLLEHKKTHLGDNKSKNASNNIEINNDSTNNNQTKCIEIENKCAICKKEFFSLEDLVKHVKQTHPNDKAFKCRYCPSLFSNSLSVYPHLKRCHADLVNLLSCDYCNKSYFTKDLLDRHKLIHTHNNSSDISEQKKYPIENKCGICKEEFSLQGSLIKHVIEAHPNDKAFKCLYCSMLFSNVRSADTHYEIKHIGGMPLSCNQCDKSFKYKSNWLKHKKTCLKDNNKSYDHNNDQNISTNDENEEEYIKIEVIDTDNNIEISNDNANNSHKRVLDIENKCTICEKEFSLQVDLVEHVKQTHPNDKAFKCPYCPSRFSSSLAVYPHLKRSHADLINVLSCDYCSKTYLRKDLLDRHRLIHTDSISSGISKPKMYQIENKCGICRKEFSLQKSLVKHVIQAHPNEKAFKCLLCPTLFSKIRSADPHYVKKHSKLPKKFVCDICGVAFYNNCHLKYHKRKHIGIKPFSCNQCNEVFSCNQSLLKHLKTHFRDNDKSYNTNTVGKNHMDAEYRENDKQNQFNEDKDDQIPSLANKCKNDNSNLLNSDEYYVRDEQSTSTNFNHDNEDQYKITRIEETAELSQIKCDVCAKVFKCKQSVAKHIQHYHPKIDLFKCLYCDDFFYSLESLSLHITVVNHLLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -