Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000350.1:1051416-1057218[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0058 0.31 11.8 4.6 1 23 104 127 104 127 0.94

2 14 6.7e-05 0.0036 17.9 1.2 1 23 134 157 134 157 0.97

3 14 0.28 15 6.5 2.9 1 15 162 176 162 184 0.81

4 14 0.0027 0.15 12.8 0.8 1 23 190 213 190 213 0.88

5 14 0.00067 0.036 14.8 0.8 1 23 219 241 219 241 0.97

6 14 1.7e-05 0.00094 19.7 2.8 3 23 249 269 248 269 0.97

7 14 0.00014 0.0075 16.9 3.7 1 23 275 298 275 298 0.98

8 14 0.00074 0.04 14.6 2.0 2 23 411 433 410 433 0.95

9 14 0.0031 0.17 12.7 0.5 1 23 440 463 440 463 0.94

10 14 3.1e-05 0.0017 18.9 0.2 1 23 468 490 468 490 0.98

11 14 0.006 0.32 11.8 2.4 1 23 496 519 496 519 0.92

12 14 8.6e-06 0.00047 20.7 3.7 1 23 525 547 525 547 0.99

13 14 5.9e-05 0.0032 18.1 3.7 3 23 555 575 554 575 0.97

14 14 0.0051 0.27 12.0 1.8 1 23 581 604 581 604 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0058	0.31	11.8	4.6	1	23	104	127	104	127	0.94
2	14	6.7e-05	0.0036	17.9	1.2	1	23	134	157	134	157	0.97
3	14	0.28	15	6.5	2.9	1	15	162	176	162	184	0.81
4	14	0.0027	0.15	12.8	0.8	1	23	190	213	190	213	0.88
5	14	0.00067	0.036	14.8	0.8	1	23	219	241	219	241	0.97
6	14	1.7e-05	0.00094	19.7	2.8	3	23	249	269	248	269	0.97
7	14	0.00014	0.0075	16.9	3.7	1	23	275	298	275	298	0.98
8	14	0.00074	0.04	14.6	2.0	2	23	411	433	410	433	0.95
9	14	0.0031	0.17	12.7	0.5	1	23	440	463	440	463	0.94
10	14	3.1e-05	0.0017	18.9	0.2	1	23	468	490	468	490	0.98
11	14	0.006	0.32	11.8	2.4	1	23	496	519	496	519	0.92
12	14	8.6e-06	0.00047	20.7	3.7	1	23	525	547	525	547	0.99
13	14	5.9e-05	0.0032	18.1	3.7	3	23	555	575	554	575	0.97
14	14	0.0051	0.27	12.0	1.8	1	23	581	604	581	604	0.97

Sequence Information

Coding Sequence: ATGGATAAAAATACTTTAAATTTTATCGACACTTATGCCAAGTTTCCTCAATTATATGATGGTAATCATCCGTTATATGGAAATGTCGATGAAAAACTAAAATCATTATCCCAATTCGCAAAAGAACTTTTACAAGACTATGACATAGATCTCGAAATAGAAACTCTCTCCAATGTCCTAAGACAATTGCAGTCTTGGTATTATCATGCCAAGACCCGCCATCAAAATAAAAAGAGAAAGTTAAATCAACATGAAATGCAATACTTTACAAAGTGTTCGTTTCTTCCCATTCAACGATTAAATGATAAATATTTTTGCAGTATTTGCAAAAAATGTTTCAATATGAAAAGTAGTCTGGACGGCCATCTCTTTAGATACCATCAAATTGGTGATTTATCCTTTGAGTGCGATCAatgtggcaaaaaattctcccagaaaaccatactgcaacaacatgtacaacgtatgcacaatagccgaaaatatcgctgtgaattttgcgataaactatttgctacaaaatcggaacatagctttcacacacgagtccatacggctgagaagccacatgtttgtgaattttgcggcaaaTCGTTTAGGATTAAAACTCAATTGGGCTATCATGTCACTGCCATACACACAAAGATACGTGCTTTTAAATGCAACATGTGCCCTAAGGATTTTCTTACGAAACGCGATCTAACAGATCACGTTAAAGCCCACTTAAATATACGCGATAAAATATGTGAAACATGTGGCAAAGGATTTTCAAATAATCATTCATTTAGGCGTCATCGCCAAATACATTCGGATGTTAAACGTTATGAGTGTAAATTATGTGATGAGAAATTTAAGCAATTAATAAGTCTTCATAGGCATAGAAAACGAATGCATAAGGATGCTACCAAAAATCCACTCACTCTTGACCAATGGGACGAAACTACAGGCAAATTTATCGATATTTTATCAAAATTTCCCATAATATACGACAAGAAGCATCCGTTACATGGCAAATTAGAGGATAAACAAAAGGCTATAGTAGAAATGCGTAATCTTCTTCTAACAGAACACAACATAGATTTCAACGAAGAAATGGTATCCAATGCCATATTGCAATTAAAAATTTGGTTCTTCCGGATGAAACGACGTAAAGGAAATCCTAGGAAATTTGAGGATAAATATTTAAAACTATGCAAATTTATACCGGGAAAACTATTGAAAGAGAAGATTCCGTGTAGCATTTGTGAACAAGTATTTTATACCGAGCATACTTTAAAACATCACTTAACCAAAGTCCATAAAGTCGGACAATTCTCATTTAAATGTGAACTATGTGGCAAAGAACTCGTTTCGAAATCATCAGTAAAATATCATAACTTAAGAGTACACGCTGAAAAGAAATTTCCCTGTGAGTTTTGTGGAAAATTATTTGCTATAAAGTCGGAACTGAAGGTCCACACACGGGTCCACACGGCCGAGAAGCCACATGTTTGCGAATTATGTGGCAAATGTTTTAGATTACGAAATCTTCTGGGTCTTCACGTTACACGTATGCACACCAGGGTTCGCGCCTTCAAATGTACTATGTGCCCCAAAGATTTTTACCATAATACCGATCTAAGAGATCATATGAAAAGCCATCTAAATATACGTGATAAAATATGTGAAACTTGTGGTAAAGGTTTTACAAACTGTCATTCCCTGATACGACATCGCCAAATACACTCAGAAGTCAAGAAATTTGAATGTAAACTGTGTGATGCGAAATTTCATCAATTTGTTGGACTTAATGGTCACATGAAACGTACCCATAATATAGTAAAAAAAGATTAG
Protein Sequence: MDKNTLNFIDTYAKFPQLYDGNHPLYGNVDEKLKSLSQFAKELLQDYDIDLEIETLSNVLRQLQSWYYHAKTRHQNKKRKLNQHEMQYFTKCSFLPIQRLNDKYFCSICKKCFNMKSSLDGHLFRYHQIGDLSFECDQCGKKFSQKTILQQHVQRMHNSRKYRCEFCDKLFATKSEHSFHTRVHTAEKPHVCEFCGKSFRIKTQLGYHVTAIHTKIRAFKCNMCPKDFLTKRDLTDHVKAHLNIRDKICETCGKGFSNNHSFRRHRQIHSDVKRYECKLCDEKFKQLISLHRHRKRMHKDATKNPLTLDQWDETTGKFIDILSKFPIIYDKKHPLHGKLEDKQKAIVEMRNLLLTEHNIDFNEEMVSNAILQLKIWFFRMKRRKGNPRKFEDKYLKLCKFIPGKLLKEKIPCSICEQVFYTEHTLKHHLTKVHKVGQFSFKCELCGKELVSKSSVKYHNLRVHAEKKFPCEFCGKLFAIKSELKVHTRVHTAEKPHVCELCGKCFRLRNLLGLHVTRMHTRVRAFKCTMCPKDFYHNTDLRDHMKSHLNIRDKICETCGKGFTNCHSLIRHRQIHSEVKKFECKLCDAKFHQFVGLNGHMKRTHNIVKKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01261200;
90% Identity: iTF_01261200;
80% Identity: -