Pazu004668.1
Basic Information
- Insect
- Protocalliphora azurea
- Gene Symbol
- ZFY
- Assembly
- GCA_932273785.1
- Location
- CAKNZW010000116.1:298952-301311[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00025 0.014 16.1 1.2 2 23 123 145 122 145 0.95 2 14 0.34 19 6.2 5.0 1 23 151 174 151 174 0.97 3 14 4.3e-05 0.0023 18.5 3.0 1 23 181 203 181 203 0.98 4 14 0.00065 0.035 14.8 1.3 2 23 242 264 241 264 0.94 5 14 0.018 0.95 10.3 2.7 1 23 270 293 270 293 0.98 6 14 0.00011 0.006 17.2 0.2 3 23 302 322 300 322 0.97 7 14 2.9e-05 0.0015 19.1 3.7 1 23 328 350 328 350 0.98 8 14 2.2e-05 0.0012 19.4 3.8 1 23 459 481 459 481 0.99 9 14 1.5 80 4.2 0.9 2 23 563 585 563 585 0.95 10 14 0.0084 0.45 11.3 0.5 1 21 591 611 591 615 0.92 11 14 1.2e-05 0.00067 20.2 1.6 2 23 621 642 621 642 0.97 12 14 9.7e-06 0.00053 20.5 3.5 1 23 648 671 648 671 0.93 13 14 8.7e-05 0.0047 17.5 2.1 2 23 680 701 679 701 0.95 14 14 0.0031 0.17 12.7 0.2 1 23 707 729 707 729 0.96
Sequence Information
- Coding Sequence
- ATGGCACATAGATTAAGCTCGAATAAAAATCGAGAAGATGCAAGAACAAAACAAATTAAACATAATCTGAATAAAGATGTTCACAATGAAACAGCATCAACCACAGAATTGAATGATTTTCCAATTGCATCAAATTATCGAATTAAAAACGAATTATTGAACTATGCTGAAGAAATGGGAGAAACAAATGTTAAAGATGAACCTTATTTTTGGACCGAAAATTCTCACGAAGAAGATACAAATAACTGGAACAATATTTTGGACGTTTTACAAGTTGAAAATAATGAAGATGCTCCTAATAATATTAAAATCAATAATGATAGCACTAGCAACAACAACCTAATCAAAGTTTATGATGTTGAAAATAAATGTGCAATATGTAAAAAGACATTTTCTTTCCAAAGAGATCTTGTTAATCATGTCCAACAAACTCATCCCAATGATAAAGCGTTTAGGTGTCGATATTGTCCCACACTCTTTTCCAAATTGAAATCAATATCTACTCATCTTAAAAGATGTCATGCAGATATAGCAGATACATTTCCTTGTAACTATTGTAGCAAATCATTTTTTAAAAAGAATTTGCTGGAGCGTCATAAACTAACACATTCTGAATATATAAAAGATCAACATCTGTATAAATACCTTGATGATAATAATTCCAGTGAGATAAGTGATGATATCTTTGAACGACGCAAGGGAAAAATTTATCCAATTGAAGACAAATGTGCAATTTGTTCAAAGAAATTTGCTCCTCAAAAAAACCTTGTTAAGCACGTTAATCACACTCATCCTAATGATAAAGCGTATAAATGTCTATATTGCCCAACGTTATTTTCAAAATTAAAATCCGTAACTACACATTACAAAAGAAGTCATTCTAAAATGCCTAAAAAAATTGCCTGTGATGTGTGTGGTATGTCGTTTTATACCAATTTTCTGTTGGATCGTCACAAACGAGTACATATGGAACTTCGGCCGTTTTCTTGCAATCAATGCGATAAAACATACAAATATAGAAGAAATCTGCTTGTACATAAGAAAACACATTTGAGAAATAATGATATAAATAATATAGAACAGGATCCAATGGATGATGAATATTGCGAGAATGATGAATATTACGAGAATGACGAACAAAATCAATTATCTGAAGATGATGAATGTGAGGATAATGATGATCAATATCAATTATTAGGCAATGAATATTGCGGCAATGATAGTCTAAATTTATTCAAAGGTGATGAGTACTATGAAAATGATGATCAAGATGTTTCAATAAATGATCAAGATGAATTAATAGATGATGAGGAAGAATTAAAAATGGATACTAACGAAGAAGAATATTTTAATAACAGTGACAAACAATATCCATTCAAGTGCTATGAATGTGGCAAAGTCTACAAGTATAAAAAGGGCTTAAGATATCATCAAAAGAAACATCGAAAAAATAATGAGCCAACAGAAACGATAATTATCGATAATACAGTGACAAATGATTCCAACGTTTTAAACATTAACACAAATACTACATATTTTATTATAGATGAATTTAATACAGATACCGAAAACTTTGAAGATTTAGAAAATGAACAAGATTTTACACCTGCTGATTACACAAATGAGTATTCTTATGACGAATATATGCCTGAGAACTCAGAAATTTCGGCTCAAGTCAGTCAGAACGAGTGTGGGGTTTGTGCTAAGATATTTAAATGCCAACAAGCTGTGGCCAAACATTTGCAACGTAATCATCCCGAAATTGAATTTTTCAAATGTCCTTACTGTGATGATAACTTCTATAGCCTAAACTCTTTATCACAACACATAACAGCTGTGAAACATTTACAGAAACGTAATGTCTGTGAGCAGTGTCTGAAGTCTTTTGATCGGAGATCAGATTTAAGACGTCACAAAAGAATCCATACTAATGAGCGCCCCTATACTTGCAATATATGCCAGAAAACCTTTAAACAAGATAGTCATTTAAAACGTCATAATGAGGTGACTCATAATGCAGCCAAAACATTAAGATGTTATTGTGAAGTTTGTTCAAAAGGTTTCACAAGCTTTGATATGCTGAAACGTCATATGATTCTACACGATCGTGAGCGTGCGTACCCTTGTTCCATATGCAAACGGTCGCTTAAAACTAGAGATGAATGGGAGGAGCATAAAGCAAATCATAATTTACGGAAACGATTTGACTCTGAATACTGA
- Protein Sequence
- MAHRLSSNKNREDARTKQIKHNLNKDVHNETASTTELNDFPIASNYRIKNELLNYAEEMGETNVKDEPYFWTENSHEEDTNNWNNILDVLQVENNEDAPNNIKINNDSTSNNNLIKVYDVENKCAICKKTFSFQRDLVNHVQQTHPNDKAFRCRYCPTLFSKLKSISTHLKRCHADIADTFPCNYCSKSFFKKNLLERHKLTHSEYIKDQHLYKYLDDNNSSEISDDIFERRKGKIYPIEDKCAICSKKFAPQKNLVKHVNHTHPNDKAYKCLYCPTLFSKLKSVTTHYKRSHSKMPKKIACDVCGMSFYTNFLLDRHKRVHMELRPFSCNQCDKTYKYRRNLLVHKKTHLRNNDINNIEQDPMDDEYCENDEYYENDEQNQLSEDDECEDNDDQYQLLGNEYCGNDSLNLFKGDEYYENDDQDVSINDQDELIDDEEELKMDTNEEEYFNNSDKQYPFKCYECGKVYKYKKGLRYHQKKHRKNNEPTETIIIDNTVTNDSNVLNINTNTTYFIIDEFNTDTENFEDLENEQDFTPADYTNEYSYDEYMPENSEISAQVSQNECGVCAKIFKCQQAVAKHLQRNHPEIEFFKCPYCDDNFYSLNSLSQHITAVKHLQKRNVCEQCLKSFDRRSDLRRHKRIHTNERPYTCNICQKTFKQDSHLKRHNEVTHNAAKTLRCYCEVCSKGFTSFDMLKRHMILHDRERAYPCSICKRSLKTRDEWEEHKANHNLRKRFDSEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261219; iTF_01194583;
- 90% Identity
- -
- 80% Identity
- -