Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000159.1:946128-951920[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00025 0.014 16.1 5.0 2 23 129 150 128 150 0.98

2 9 1e-06 5.4e-05 23.6 3.1 1 23 156 178 156 178 0.99

3 9 1.6e-07 8.6e-06 26.2 1.8 1 23 184 206 184 206 0.99

4 9 3.9e-06 0.00021 21.8 3.6 1 23 310 332 310 332 0.99

5 9 6.1e-06 0.00033 21.2 0.9 1 23 338 360 338 360 0.98

6 9 0.00014 0.0077 16.9 3.8 1 23 366 388 366 388 0.98

7 9 1.2e-06 6.3e-05 23.4 1.7 1 23 509 531 509 531 0.98

8 9 1.7e-05 0.00095 19.7 3.6 1 23 537 559 537 559 0.99

9 9 3.2e-07 1.7e-05 25.2 1.2 1 23 565 587 565 587 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00025	0.014	16.1	5.0	2	23	129	150	128	150	0.98
2	9	1e-06	5.4e-05	23.6	3.1	1	23	156	178	156	178	0.99
3	9	1.6e-07	8.6e-06	26.2	1.8	1	23	184	206	184	206	0.99
4	9	3.9e-06	0.00021	21.8	3.6	1	23	310	332	310	332	0.99
5	9	6.1e-06	0.00033	21.2	0.9	1	23	338	360	338	360	0.98
6	9	0.00014	0.0077	16.9	3.8	1	23	366	388	366	388	0.98
7	9	1.2e-06	6.3e-05	23.4	1.7	1	23	509	531	509	531	0.98
8	9	1.7e-05	0.00095	19.7	3.6	1	23	537	559	537	559	0.99
9	9	3.2e-07	1.7e-05	25.2	1.2	1	23	565	587	565	587	0.98

Sequence Information

Coding Sequence: ATGCACCTCAATCATGCTACAGCTGTAAGTGCGACTGCCATGGTCAACTATCAACATTATGCACCGGCACAAATAACCACTTCCCATGGTGTAACCACGTCTACGGGTCAACAACAGACAACAATATCTGCAGCTGGACTGCAGCAAACACCCTTTACGCTGCATCAATTAACAGCGGTACAAGCCATACAACATCCCACACATCAAGCCATGCTACATCCACAACATCCATTGGTTCATTTACTGGACATTTCAACAACGGCGGCAGCTTCCTCAACAATCAACAATAATCCCACAGCACCGATAACACCGATGCCAGTGACTAAAATCGAAATGCCCGAAGAGATACCCGAGCCGATAATCGACGATCCACGCAAAAAGAAACAGTGCCACATTTGTAAAAATAAATTTCGCCAATTGACCACTTTGCGAAATCATATGAagatacacactgacgaaagaccctacaagtgtaaacattgcgataaagcctttcggcaaatatcaacactcacaaatcatgtcaaaattcacactggcgagaaaccattcaaatgcaatatctgttctaaggactttcgacaacaatcgacattgataaatcatattaaaacgcataaggTTTTTGCTTCACTGGCAGAATCGAATCAAACGCCAGCTTCAATACTAAACTATCAGACACAACCGACGCAGGGTACTTCGCGAAAGGGTCACTCAAAGTCGATTGTACATTCGGCAGCAGCCGCTGCAGCTCAGGCTCAACTAATCCATCAGCAACAGATGCAACAACAACAGCAGCAACAACAACAACAGCAACAAGGTCAAAGTACAATTGTAACGTATACGCCACAGCAAAGACAAAACATAACAAAGAGTCTATATACTGGCAGTTACAATTCGCCACAGGCCGATGAGCTGGTTaaaccgtatcagtgtaagatctgccagaaacgttttccacaactaagtaccctgcataatcatgaacgtacgcatattgatccgaaaccttataagtgcgatacatgcgaaaaatcctttagtcaattggcaacattggcgaatcataagaagatacattcgggtgataagccatatgcatgtgCTTATTGTTGCATGACGTTCCGCCAACAAAGCACCCTAAACAATCACATGAAGACACACGCCAATCAAGTGGCCACTATAACAACCAACTCTACTACAGCAGGCACAGGAGGAGGAGCGGCTGGACAAGGAGGAAATCATCATCCTCATCATCATCAGGCTGGTAATAACAACATCCCTTTGGCAGCAGCTACTATAATGGTGACACCAACCGCCTCGGGACATCTACAAATACAGCCACAAGTTGAACATCATCCCTTGCTACACTTTCTAGACAGCAATACAACCGTTAGCACCCTTAGCACGAAGGAGCAGTTTGCAGCTGCAAACAACAACAACAATAATAACCACAACACAAACAACACCAACCCCACAGGAATTGTGGCTCACTGTTTACGCAACAGTTGTCCAGATCGTccatttatgtgtagtgtctgccgtcgggcattttcccaacagagcaccctaaccaatcatttgaagacccataccggtgaaaaaccctataaatgtaaaatttgcgaaagtcatttcagacaattgtctacactaaataatcatatgaaaatacatacgggtgaaaaaccctatgcttgttcctattgtcctaagcaatttagacaaaaaagtacactaacaaatcatgtacgtattcatactggCTGA
Protein Sequence: MHLNHATAVSATAMVNYQHYAPAQITTSHGVTTSTGQQQTTISAAGLQQTPFTLHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTAAASSTINNNPTAPITPMPVTKIEMPEEIPEPIIDDPRKKKQCHICKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFKCNICSKDFRQQSTLINHIKTHKVFASLAESNQTPASILNYQTQPTQGTSRKGHSKSIVHSAAAAAAQAQLIHQQQMQQQQQQQQQQQQGQSTIVTYTPQQRQNITKSLYTGSYNSPQADELVKPYQCKICQKRFPQLSTLHNHERTHIDPKPYKCDTCEKSFSQLATLANHKKIHSGDKPYACAYCCMTFRQQSTLNNHMKTHANQVATITTNSTTAGTGGGAAGQGGNHHPHHHQAGNNNIPLAAATIMVTPTASGHLQIQPQVEHHPLLHFLDSNTTVSTLSTKEQFAAANNNNNNNHNTNNTNPTGIVAHCLRNSCPDRPFMCSVCRRAFSQQSTLTNHLKTHTGEKPYKCKICESHFRQLSTLNNHMKIHTGEKPYACSYCPKQFRQKSTLTNHVRIHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00350334;
90% Identity: iTF_01261193;
80% Identity: -