Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000122.1:527507-532616[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00062 0.034 14.9 0.5 1 23 134 157 134 157 0.97

2 13 0.00077 0.042 14.6 3.0 2 23 163 185 162 185 0.97

3 13 1.8e-06 9.6e-05 22.9 3.4 1 23 194 217 194 217 0.97

4 13 6.9e-06 0.00037 21.0 5.0 2 23 464 485 464 485 0.98

5 13 5.3e-07 2.9e-05 24.5 3.2 1 23 491 514 491 514 0.96

6 13 0.00017 0.0091 16.6 2.1 1 23 519 542 519 542 0.98

7 13 5.9e-05 0.0032 18.1 1.2 1 23 553 575 553 575 0.95

8 13 0.00094 0.051 14.3 3.0 1 23 580 603 580 603 0.97

9 13 3.2e-05 0.0017 18.9 0.8 1 23 609 631 609 631 0.96

10 13 0.00014 0.0078 16.9 1.9 1 23 637 659 637 659 0.98

11 13 7.4e-07 4e-05 24.1 1.6 3 23 667 687 666 687 0.99

12 13 5.2e-07 2.8e-05 24.6 0.3 1 23 693 715 693 715 0.99

13 13 0.00091 0.049 14.3 0.1 1 23 720 743 720 743 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00062	0.034	14.9	0.5	1	23	134	157	134	157	0.97
2	13	0.00077	0.042	14.6	3.0	2	23	163	185	162	185	0.97
3	13	1.8e-06	9.6e-05	22.9	3.4	1	23	194	217	194	217	0.97
4	13	6.9e-06	0.00037	21.0	5.0	2	23	464	485	464	485	0.98
5	13	5.3e-07	2.9e-05	24.5	3.2	1	23	491	514	491	514	0.96
6	13	0.00017	0.0091	16.6	2.1	1	23	519	542	519	542	0.98
7	13	5.9e-05	0.0032	18.1	1.2	1	23	553	575	553	575	0.95
8	13	0.00094	0.051	14.3	3.0	1	23	580	603	580	603	0.97
9	13	3.2e-05	0.0017	18.9	0.8	1	23	609	631	609	631	0.96
10	13	0.00014	0.0078	16.9	1.9	1	23	637	659	637	659	0.98
11	13	7.4e-07	4e-05	24.1	1.6	3	23	667	687	666	687	0.99
12	13	5.2e-07	2.8e-05	24.6	0.3	1	23	693	715	693	715	0.99
13	13	0.00091	0.049	14.3	0.1	1	23	720	743	720	743	0.98

Sequence Information

Coding Sequence: ATGGAAATAAATACAAGTTTTTCAAGTTTCAATAAAAACACAATATGTCGTATATGTATGCAGAATGATACCAATTTATTTCCGATTTTTAATGAAGTATTCTCTGGCGACAACACCATTACCATAGCTGAAATTTTATCAGAGTGTACAAAATATCCTGTGGCACACAATGATCAGTTGCCAACACAAATATGTAATAACTGTATGGCAGCTGCCCGCAGTGCCCACCAATTTAAAAGGCAAACAGAAGAGGCCTACTGCCAACTTAAAGCGTTGTATGATATAACATGGGTTCCCAAAGAGGAGAAGGGTAGCACTAATAATTGTGGAAGTGGTACAACTATGAGGGTGAGCGCCCTCACCACAAACAAGTATACACAAACTGATAAAAGCACTGTGTTTCAGTGTGAGATTTGCCCGAAAAAGTTTTTTGTCGAAAGCGAAATAAGACAACATCGTGCCACCAGCCATATTAATGATGGCAAGAAATGTCGTGTTTGTGGGGAAACCTTTCATCATTTGGGACAATTAAAAGTACATTTGTCCACTGAGCATCCTAGCGAAGGTATACGTTGTGATTTTAAATGTAATGTATGTTCAAGAGAATTTACCCGTAAGGACCATTTGAAAAGGCATTTAATACGGGTGCACAAGATTGAAGATGATAAATTAAATATTTCCAAAGTATCTCTTGATGAACCTGAAATTGAAACAGTACTATCTACTAGTTTAAATAACTACAGCAGTCATTGGCCCGATTATCAAGAGGATGATGAAAACGAACCGATTGCAATTGATAGCCAAACTAATGAGATAATGACAGCTACAAATCCTTTCTCTAGTGAAGATGAAGGACTAGATCATCATAATTTCAATGAAATGGAGGAAGCAGATGTTAAACAGTTTGTAGAAACTATAGCCCACCCAGAAATATCTATTAAAGTTGAAAATCAAGAGTACAGTTACAATAACACAAGCGATAAAAATGAAAAAGTAAATAAATCCTTAAATAGTTCATTTGAAGAAATAAAATCTGCTTTAAAACCAGAAAAACCCGTAAATAAGGTAGAAATAAAAGAAAATGAGAATGAAGATGATAACGACGATAATATTAACCATTCATTTGGTGATCATCATAGCAACAACAATACCAGCGAAGATGACTCAGATGAGGATTATAATAAGGAAGGTGAAGATGATGATGATGATGACGACAATTTTGAATCCAATAAAAAGTCTCATAAGTCTACTATGTTGGCGTCTATAAAACAAGAACAAACTAATGTACAAACTGAAAATCCTTCAAGTTCCAGCGCCAACACCAAAATCAAAAGTACTACAACCAAACCACCAAGACGACGGCATGGTTCTTCTAAAAACGAAGATAATCGTTGCAAAGAGTGTAATCGCACATTCACCCGCTACAATCATCTACTGCGTCATATGCTGACACACAGTGATGAAAAACCACATGTTTGTAACTTTTGTGGAAAAGGATTTTCACGTTCGGATCATCTACAAAAGCATATACAGAGTATACATTGTGAAAAGAACTATAAATGTGATCAGTGTTCAAGCGCTTATGGTCGCAAAGATCATTTGCAACGACATATAGAAACGAGACACAATAAAGACCCTACGGTTCAGAAGCCCCAATTCGATTGTGATATGTGTGAGAAAAAGTTTACCACTAAGGCTTATTTAGCAAAACATAAATTATTACATACTGATCGCCTGTATGCTTGCAAACATTGTTCGGAAACTTTTCCCGAAAAGGAACAAATGAAGGAACATCAAAAGAAAAAACATGCCCAGCCTCGAAACTTTTTGTGCAATATTTGTGGAGATTCATTTCAACGTAATGAATATCTTAAGATACATATGCGTCGTCATACGGGTGAAAAACCCTACAAATGTCGCTTTTGTGAAAAGGGATTCCCACGTAGCACTGATTTGAAAATGCATGAGAGATATCATATTGGCCACAAACCTAATCTATGCAATTTATGCGGCAAAGGTTTTCATCGTCCCTATAATCTTACCATACATATGCGTACCCATACGGGTGAAAAACCCTACAAATGTAATCAATGTCCTCAAGCATTTGCTCAAAGCAACGACTTGAAAGCTCATATAAGACGTCATACAGGAGAGCGTTTTCGTTGTGATATATGCAGTGCCGCTTTTTTACAACGGTATGGCCTAAATGCACACTTAAGGACGGTACATGGTATAATAGTTACTTCCTTTACCGGACGTTTGCGTAAAACTGATCAACCGGTAGAAGGTGCTGAATTACATGATCAACAGCCAACAGATGCACCCCCGCCACAAGCAACTTCTGCACAAGAACAGTCCCAAACCTCGCTGTCCTCACCTCTTGTAGATAGTAATGTAACACCTCCGCCTTTATATTTAGGTCAACATTTTATAAATCCATTACCACCAGTTGTTGTTAATACCATACCAACATCTCCCATTGATATTTCATCTTCAAGTGCAACATTGCCTCTTCCATTACCACATCAATCAACGCCACAAATGTAA
Protein Sequence: MEINTSFSSFNKNTICRICMQNDTNLFPIFNEVFSGDNTITIAEILSECTKYPVAHNDQLPTQICNNCMAAARSAHQFKRQTEEAYCQLKALYDITWVPKEEKGSTNNCGSGTTMRVSALTTNKYTQTDKSTVFQCEICPKKFFVESEIRQHRATSHINDGKKCRVCGETFHHLGQLKVHLSTEHPSEGIRCDFKCNVCSREFTRKDHLKRHLIRVHKIEDDKLNISKVSLDEPEIETVLSTSLNNYSSHWPDYQEDDENEPIAIDSQTNEIMTATNPFSSEDEGLDHHNFNEMEEADVKQFVETIAHPEISIKVENQEYSYNNTSDKNEKVNKSLNSSFEEIKSALKPEKPVNKVEIKENENEDDNDDNINHSFGDHHSNNNTSEDDSDEDYNKEGEDDDDDDDNFESNKKSHKSTMLASIKQEQTNVQTENPSSSSANTKIKSTTTKPPRRRHGSSKNEDNRCKECNRTFTRYNHLLRHMLTHSDEKPHVCNFCGKGFSRSDHLQKHIQSIHCEKNYKCDQCSSAYGRKDHLQRHIETRHNKDPTVQKPQFDCDMCEKKFTTKAYLAKHKLLHTDRLYACKHCSETFPEKEQMKEHQKKKHAQPRNFLCNICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHIGHKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYKCNQCPQAFAQSNDLKAHIRRHTGERFRCDICSAAFLQRYGLNAHLRTVHGIIVTSFTGRLRKTDQPVEGAELHDQQPTDAPPPQATSAQEQSQTSLSSPLVDSNVTPPPLYLGQHFINPLPPVVVNTIPTSPIDISSSSATLPLPLPHQSTPQM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01261178;
90% Identity: iTF_01261178;
80% Identity: -