Pazu007762.1
Basic Information
- Insect
- Protocalliphora azurea
- Gene Symbol
- ZNF217
- Assembly
- GCA_932273785.1
- Location
- CAKNZW010000185.1:3520156-3526872[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.027 1.5 9.7 1.1 1 23 203 226 203 226 0.93 2 23 0.0033 0.18 12.6 4.2 1 23 266 289 266 289 0.95 3 23 0.4 22 6.0 2.2 1 23 295 318 295 318 0.97 4 23 0.00066 0.036 14.8 0.8 2 23 349 370 348 370 0.96 5 23 0.022 1.2 10.0 0.5 1 23 447 470 447 470 0.96 6 23 0.24 13 6.7 0.6 2 23 478 499 477 499 0.97 7 23 0.2 11 7.0 1.9 2 20 636 654 635 657 0.92 8 23 0.0041 0.22 12.3 1.1 1 23 735 758 735 758 0.96 9 23 0.025 1.4 9.8 2.4 1 22 765 786 765 786 0.95 10 23 0.097 5.2 8.0 0.1 2 23 798 820 797 820 0.94 11 23 0.00054 0.029 15.0 2.1 1 23 868 890 868 890 0.98 12 23 0.0043 0.23 12.2 0.5 2 19 917 934 916 936 0.95 13 23 0.00016 0.0084 16.8 2.9 1 23 988 1011 988 1011 0.98 14 23 0.047 2.6 8.9 2.4 1 23 1048 1071 1048 1071 0.97 15 23 3.4e-06 0.00019 22.0 0.3 3 23 1139 1159 1138 1159 0.98 16 23 8e-06 0.00043 20.8 0.5 1 23 1165 1187 1165 1187 0.99 17 23 2.9e-05 0.0016 19.1 3.6 1 23 1193 1215 1193 1215 0.98 18 23 1.5e-05 0.0008 20.0 3.3 1 23 1221 1243 1221 1243 0.96 19 23 0.00029 0.016 15.9 1.5 1 22 1249 1270 1249 1273 0.92 20 23 0.00036 0.02 15.6 0.3 3 23 1298 1318 1297 1318 0.99 21 23 0.0021 0.11 13.2 4.2 1 23 1324 1346 1324 1346 0.98 22 23 1.4e-05 0.00077 20.0 3.6 1 23 1352 1374 1352 1374 0.99 23 23 5.4e-05 0.0029 18.2 2.6 1 23 1380 1402 1380 1402 0.99
Sequence Information
- Coding Sequence
- ATGTCGAGTGATTTTAAGAATGAATGTTTTATAAATGGTGTGCGTTATAGATGTCGCACTTGCTTTGATCCGGGACGTTCGCTATATTCCCTTAAAGATGAGTGCAGCAATTCAAAAACTTGGCGTGATTTATTTAGAGAAGTTGCTCATTTACAGACAAAAGAGGACGAGTTACTTCCAAATACTGTGTGCTCCAAATGTTTGGACAAACTTATAACATTTTACGATTTTATACTTCAAATCAATAATGTGAATAAAAAATACATGGAGCTATTGGCAATTTCGAATGATCCTCTAAATGTGGAAAGTGCCAGGAAAAATGATACTTTTAGCGACTGCTTGTCTGAATTTGAAATTGATATGCCAATGGAAGAGTTTATATCAGAAATTAAATTGGAAGAAGAGCTGATCGCACCGTATGATATAGTTTTAAGTAGCAACAATAAAGATGACCATAATACTTTTGATGAGGATATAAAATTAACTCCATTGCAATTGGAAGAAAACAAAGGTTCTATAGATGATCAAACCAATCAAAGTTATAACAATAACTACAATGATGACTCCAATAACTTGTATGAAAAAATCATAAAAATTCACAATCGTTTTGCATGCCCGAAGTGTAAGAAAACATTTGCAGCCGCAGCGTCTTGTCGTCGACACTTAGATAAGATACACTCTCAACAAACTAGTGGATCCAGCTCCTCGTCCTCCGATGAATACGATAACATGCCTACCAATAGCCAAACTAATGAAGAGTCGGATTATGGCGAAATCGAAAAGGTGGACAATCGTTTTGCGTGTCCTGTATGTAAAAAAACATTTACTTTAAAAAGAAATTGTCGTCGGCATATACGCTTTTTACATTTAAAACAACGCAGATTTTCTTGTGGATTTTGTGAAATAACTTTCATATGCAGAGACTATTTGTATGCGCATCTTAAACGTATGCATCCAGGGGAAACAATTGATTCGAACAATAAGGTTATTCAACGATTATTTGGAGATCGCTTATACAATAAACCCACAACTTGGCGTCATGTAGAATGTAAATTGTGTTCAACCACTTTTACTACAACTAAAGAACTTCGTGAGCACTTAGAAAGCCACAGTCATTTACAGACTCTTCATAACTTGAAAATGAGCGATCAAATTGTCCAGCATTTGTTCGCAAATATTAAAGATTTAAATATTGTCAAGGAAAGTATACTCAAAGATATTTCAGAGAAGAATTTTTTCAAATACTACTCAGTTTTAAATAATTATTGTTATGAGATGTCTATTAGTGATACAGAAGCCGAAGATTTGGTAGATAAAACTACAGAGCGTACCAGCAAATATAAATGTGAATTGTGTGCTGAAGAGTTTTCGTTTAAATACCAAGTTTTCTTACACTTAAAAGAAGCGCATCCTAAGGAGGAAATTCCTCTTAAATGTAAACGATGTAAATTAGAATTTGTTTCTATTGATATTTATGAAAAACACATACAAACACACTGTCGTAATAAGCATAAAGTTTTATATTGTGAACATTGTCCGGGCACGTTCATTTGGCCAGAAAATAAGAAAAATCACAATTGTCCATCGAAAATTCCGGAGACTTCAGTAGTCACTGCTAAAAATCAATTAAAATCTAATGATGGTGAAGTTGTAGAAAAGACCAAAAATGCAGAACAATTACAGCTACAAAGTAGTAATAAAAATCACAATTCAATCTTGAACGTTTCAGAGACATCGCAGGTCGCTGCTGAAGATCAAATAAAAACGAATATGCCCAAATATTCCTCAACCATTTCGGAGACTTCACCTTTCTCTGATGTGAATCAACTAAAAACGAACTATAAAAGCCAAGAACATCTGAAGCAAAATGATAATGACAGTGTCACTTCAACAGAGACTATAATACGTTGTGCTCTTTGTGCCCTTTCATTTAAAAAACTAAAACATTTGCACCAGCACATGCCGGTGCACGCCGATGGCAGAACAAATGTTGATTTGAAAGATTGCCTTTATGTAAAAATCTTTAAACATTCGAAAATTGTTGATTATCCACTATGGCAGCAGCAGATTAAAAATGCCTACAACAAATCTCAAATAAGTCGCTTTTATCAAGCCATCGATAAACACGGTAATGAATTGGATATTTCAGATTCAGATAGTTTTACAGACAATAGTGATGCTGTTCAAAATGTTAATAAACGATACATGTGTGATCTTTGCAAAGAAATATTTCAAAGGCGAAAACTGTTATTAAACCATCAACAAGAATTCCACAGAAATGTTTCACTACCCTTCACATGCACGAACTGCAATCAACAGTACGTTAATTTTCATTTGCTACAACAACATTTAAAAAGGGTTTGTTGGAATGAACACCGACGAATTGCCCAACAATGCGAAGTTTGTAATGCTCGCTTCATATGGCCGGATAATCTGTTAAAACACAAAGCAATACAGCATACTCAGGCCCCAAAATATTCCGCTAGCATTCCCACATTGAGTCGCACTGTCAACTCAATGGCAATTGTATCAACAGAAAGTTTTTTCCCCAATGATGAACTATCTATAACTGCAGAGCTATTACTAGAACCTTCCTTTCTTTATTATTGTCTCATGTGCCCAAAAACATTCTTCACCATTGAACATCTCAACGACCATTTACTTCGGCATCGTTTGACTCCAACCGATATAAAAACCGTTGAAAGTATAGTTCATTCCACATGGTGGCCCAATGGGGAAAAAATAATTAAATGTAAAATATGTGATTTAACATTCAAAAGTATGGCCAAATTAAAACAACATTTTTCACCTACAAATCTTGAAAACTTTTGTGCCGATAAACATTCACTAGCAAATTATTCGATTACTAATCAAAAAGGATTCGAGTTGCATTTGCAATTAGATTCTGAAACAGAGATAGAGGATGAACATAATGTAACCGACACAAATGCTGTATTCCCCTATAAGTGTTGGATGTGCAGTAAGTATTTCAAACGAAAGTATCAAGTGGCCCAACATCAACGTTCTATGCACAATTATGAATTACTTGAGCTAAAATGTGAACGTTGTATTTTTCGCACAGTTTCTCAGaaagttttatcttatcataaagccacgcagtgttttaattttgaaaaggaatacgaatgtaatcactgcaactttaaatttatgtggaaagaaaatctcgacaatcatattctttcctttcatactccaaaTGTATTGACTACTACAACAAATGCTGTTAAGACGGTGGCCTCTAATGAAACTATAACCTACAACAAAAATGATGCAAGTATTTCCGAACGTATTAACTCAGAACAAATCGAAATAAATGATAAaatgtcgactaatatttccaagccaaaaaatagcaaacaacccacagcatcggtagtgaataaacctttatgttttatttgtggcgctacctttaataacaactctaatcttgaagtacacataaggagacataagggtgagaaaccttttaagtgtagtttttgcgaaatggcctttccacgcaatgccgatttacaggaacatcaacgaacacatacaggcgaacgtccctacaaatgtacgttgtgtgaaaaaaccttttctcgacaaaacaaattaactatgcacaaacgtttacacaccggtgaacttccttaccattgtacaatttgtccgaaatcatttaatagatcggaacatttaaaactccacctgcttggtcataaaggtgagagaccatacaagtgtaacgtttgcggcaaaggctttatatgcgcttcatatttgaaaagacaccgtagagatgtgggacacaaggaaacagatacaatttgtaatacaaataattctgaggagaacacaccaaaagaaccaaaaaaaatattatgtcctcagtgtggagtatacttgtctactaatactagtcttaatttacacatgagaacacacacgggtgagagaccacataaatgcgatttttgcgaaatgtcctttatacgaagatgcgatttaattgatcaccgacgcgtacatacggccgaacgtccctttaaatgcacttattgcgagaaatcattttcgaagagatccagattaaatgttcataaacgcatacacaccggcgaacgtccttacaagtgtacattttgtgagaaagcatttaataaatctgaaaatttcagactacatttaagacttcatacaggcgaaaaaccctatagatgcgacgtatgcagtgaagcctttttatgtgcccgatatctgaaaaatcatcgtattaaaaagggacattatgaagaaaaaGATTGA
- Protein Sequence
- MSSDFKNECFINGVRYRCRTCFDPGRSLYSLKDECSNSKTWRDLFREVAHLQTKEDELLPNTVCSKCLDKLITFYDFILQINNVNKKYMELLAISNDPLNVESARKNDTFSDCLSEFEIDMPMEEFISEIKLEEELIAPYDIVLSSNNKDDHNTFDEDIKLTPLQLEENKGSIDDQTNQSYNNNYNDDSNNLYEKIIKIHNRFACPKCKKTFAAAASCRRHLDKIHSQQTSGSSSSSSDEYDNMPTNSQTNEESDYGEIEKVDNRFACPVCKKTFTLKRNCRRHIRFLHLKQRRFSCGFCEITFICRDYLYAHLKRMHPGETIDSNNKVIQRLFGDRLYNKPTTWRHVECKLCSTTFTTTKELREHLESHSHLQTLHNLKMSDQIVQHLFANIKDLNIVKESILKDISEKNFFKYYSVLNNYCYEMSISDTEAEDLVDKTTERTSKYKCELCAEEFSFKYQVFLHLKEAHPKEEIPLKCKRCKLEFVSIDIYEKHIQTHCRNKHKVLYCEHCPGTFIWPENKKNHNCPSKIPETSVVTAKNQLKSNDGEVVEKTKNAEQLQLQSSNKNHNSILNVSETSQVAAEDQIKTNMPKYSSTISETSPFSDVNQLKTNYKSQEHLKQNDNDSVTSTETIIRCALCALSFKKLKHLHQHMPVHADGRTNVDLKDCLYVKIFKHSKIVDYPLWQQQIKNAYNKSQISRFYQAIDKHGNELDISDSDSFTDNSDAVQNVNKRYMCDLCKEIFQRRKLLLNHQQEFHRNVSLPFTCTNCNQQYVNFHLLQQHLKRVCWNEHRRIAQQCEVCNARFIWPDNLLKHKAIQHTQAPKYSASIPTLSRTVNSMAIVSTESFFPNDELSITAELLLEPSFLYYCLMCPKTFFTIEHLNDHLLRHRLTPTDIKTVESIVHSTWWPNGEKIIKCKICDLTFKSMAKLKQHFSPTNLENFCADKHSLANYSITNQKGFELHLQLDSETEIEDEHNVTDTNAVFPYKCWMCSKYFKRKYQVAQHQRSMHNYELLELKCERCIFRTVSQKVLSYHKATQCFNFEKEYECNHCNFKFMWKENLDNHILSFHTPNVLTTTTNAVKTVASNETITYNKNDASISERINSEQIEINDKMSTNISKPKNSKQPTASVVNKPLCFICGATFNNNSNLEVHIRRHKGEKPFKCSFCEMAFPRNADLQEHQRTHTGERPYKCTLCEKTFSRQNKLTMHKRLHTGELPYHCTICPKSFNRSEHLKLHLLGHKGERPYKCNVCGKGFICASYLKRHRRDVGHKETDTICNTNNSEENTPKEPKKILCPQCGVYLSTNTSLNLHMRTHTGERPHKCDFCEMSFIRRCDLIDHRRVHTAERPFKCTYCEKSFSKRSRLNVHKRIHTGERPYKCTFCEKAFNKSENFRLHLRLHTGEKPYRCDVCSEAFLCARYLKNHRIKKGHYEEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261185;
- 90% Identity
- -
- 80% Identity
- -