Basic Information

Gene Symbol
cdc5l
Assembly
GCA_932273785.1
Location
CAKNZW010000095.1:248030-250542[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.6 1.5e+03 -0.4 0.0 3 18 119 134 117 135 0.85
2 6 0.62 6e+02 0.9 0.1 10 42 157 195 155 199 0.78
3 6 2.2e-11 2.1e-08 34.4 0.1 1 45 205 250 205 251 0.96
4 6 3.1e-05 0.03 14.7 0.1 3 43 261 305 259 308 0.83
5 6 2.5e-11 2.4e-08 34.2 0.0 4 46 318 361 316 361 0.93
6 6 6.6e-05 0.064 13.6 0.1 3 45 369 413 367 414 0.94

Sequence Information

Coding Sequence
ATGACGACAAATACCAACGTTGAGATGAAAACTAAATTAGAAGATACGTTAATTCTGAATCAGCAAATGCAAGTCCAGCTAGTTGCCATGAGAGAAAAGCTGGAGAAGTTATTGTCAAATGTTAAAGAATCTTATAAAATGAATGAAGTTTTGCTAAAAGATGGTATTATAAGAAGGCGAAAAAAAGGAGTAGGAATAAAAGGTGCCTATTTGAGGGGAGGCACATTTTACTTAAAAGGAAATATGTTTTTCAAAGACATAAAATGTCGTAATTGTCCAAATAACCCGGATTATGAAGAAAGAAAAATGGAAGGAGAAATGTTTCCTATGGATTTGAATTTGAAATCGAGACACGTTTGGTCTACCCAAGATAAACAAAAAATTATATTGGGCATTAAAGAACAGATAATTGATTACTTGGCACATAGTCATAATAAGCTAGAGGTGGAAAATAAGGAAGTAAATAGTGAAAAGTTGGCAAAACTTTTAAATATGGTACCCAAGAATTTTCGCATCGATTGGGACCATATATCAAGTTACAATCTTCTACATCGCCATTCGGCCAAAACGTGTGAAGCAATTTGGAATTTATTCTTACATCCCTCGTTAAAGCGCACCACCTGGTCTGAGGAAGAAAATCAAAAACTTTTGGAAGCCGCTAAAAAATTCAGCTTTCAAAATTGGCCAGCTATAGCTAATGAAGTTGGTAAAAGATCAGATTTTCAGTGCTTTGTTCAATATCAAAACTACGTCTGTTATTTGCTGCCTGAATCTTCTTCTAAATGGACTAAAGAAGACGACGATCGTCTTCGCGAAGTTATTGCTAAAAATATGGTAAATGGTATTATTAATTGGAGTAATGTAAATGCACACTTTCCACATAAAGCTAAAACTACTTTGCATACTCGTTATAACTATACGCTTAATCCAGCTATAAGCCATGGTGCCCAATTTACTCCGGAAGAAGATCTTCTTTTAATAGCGGCCGTTAAAGAATACGGAACAAAATTTAATTGCATACCACGTACTCTATTTCCTAATCGATCATTAGTACAATTGCGCGCTCATTATAAAAATGTTTTAGCTAAACGTCATAACCACCATCCCTGGTCTTTAGAAGATGACATTAAGTTAATGGATTTTGTGACGGCAAATGGTACTAAAGAGTGGCTGCAATGTGAAAATTCTTTTAATGGAAAACATTCACGTACAAGTTGTCGCACAAGATTTTTAACTATTAAAAAATATTTGGAAAAGAATCCTGATGGCAGTCTTGAGGATATACGAAGAAAGCAGATAAGGACATATAAATCTATAAATATTGAAAATTGGAAAGAAAAAGTTGAGCAATTGTCTATAAATCCAAATGGAGTAGAATTTAAAAAAATAGAAAGTGAAAAAGTTAAAAAACCAAAAATTGAAAAAACAAATAAATCTAATAGAGAAAAAATTAAAAGAACTAGGAAAGTAAAAGTTAAGAAAGCTACTAAGGAAGAAGACCAAATTCAAGCGAATGAAAAAATACCACAACCATTGAACGAAAAATTAGAATCATATGAAAAGCAATTGTGTGAAGAAGCAAAACCAGTACTTGAAAAAAAGCAATCAAGTAAACGAAAACTTCAAACAATTGAAAAAAATCTCGAAAGTGTACCACCCACGAAAAATAAATCAAACAGAATAAGAATTAGAAAGTCAAAACCTGCACAGAAAGTAATAACGGAAAAACCTTATATACCACGACTGAGAGCAAATGCTCTGAAAAATTATCATTATTTCAAATATGCCTATAATCTAAAAATGCATCAACATCCTTGCGATAACATTCAAATAATAAACAATGATTTTACTCTTACAATGTCAGCATTGAATCCCCAAATACCCTTTTTACTAGACAAATGTGAATTTGATTCTAGTATACCAGAGCATATTAAGCAAAATGTTAAAAGTAGTTCGGCACAACTTTCAACTATTGAAAATCTTCCACTTTTGCCTCCAAATTGGTCTACAGCTATGGGATTTCGGGCTCTTTGCATACAAGCAGCAAGTATTACATCAGATCTACCAAATGAGCAGATGTTGTCAGTGAACACAAATCCTCATATAACCCAATTTCGTGAACGTTTACGTTCACTTTTCTATTCAACAGCTCTGTTAAGTCGTTTAAATCCTAGAATGGTGGGTATTACAACGACTGAGACTGAAAATGTTAGAGCGGTGAAACGCAAACGATTCCATATTAAAAAAGAAAACGAACAGAAAATAAGTAGGAAAATTAAAAGTATGGAAATTATTGAAAATATAAAGACAGAATTAGAAACGTAA
Protein Sequence
MTTNTNVEMKTKLEDTLILNQQMQVQLVAMREKLEKLLSNVKESYKMNEVLLKDGIIRRRKKGVGIKGAYLRGGTFYLKGNMFFKDIKCRNCPNNPDYEERKMEGEMFPMDLNLKSRHVWSTQDKQKIILGIKEQIIDYLAHSHNKLEVENKEVNSEKLAKLLNMVPKNFRIDWDHISSYNLLHRHSAKTCEAIWNLFLHPSLKRTTWSEEENQKLLEAAKKFSFQNWPAIANEVGKRSDFQCFVQYQNYVCYLLPESSSKWTKEDDDRLREVIAKNMVNGIINWSNVNAHFPHKAKTTLHTRYNYTLNPAISHGAQFTPEEDLLLIAAVKEYGTKFNCIPRTLFPNRSLVQLRAHYKNVLAKRHNHHPWSLEDDIKLMDFVTANGTKEWLQCENSFNGKHSRTSCRTRFLTIKKYLEKNPDGSLEDIRRKQIRTYKSINIENWKEKVEQLSINPNGVEFKKIESEKVKKPKIEKTNKSNREKIKRTRKVKVKKATKEEDQIQANEKIPQPLNEKLESYEKQLCEEAKPVLEKKQSSKRKLQTIEKNLESVPPTKNKSNRIRIRKSKPAQKVITEKPYIPRLRANALKNYHYFKYAYNLKMHQHPCDNIQIINNDFTLTMSALNPQIPFLLDKCEFDSSIPEHIKQNVKSSSAQLSTIENLPLLPPNWSTAMGFRALCIQAASITSDLPNEQMLSVNTNPHITQFRERLRSLFYSTALLSRLNPRMVGITTTETENVRAVKRKRFHIKKENEQKISRKIKSMEIIENIKTELET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01194326;
90% Identity
iTF_01260923;
80% Identity
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