Basic Information

Gene Symbol
Zfy2
Assembly
GCA_036172665.1
Location
CM069876.1:50741686-50747383[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.28 17 7.0 0.4 1 20 17 36 17 38 0.94
2 16 8.1 5.1e+02 2.4 3.1 2 23 46 68 45 68 0.91
3 16 2.8 1.7e+02 3.9 3.9 2 23 76 98 75 98 0.93
4 16 0.77 48 5.6 0.7 1 23 158 180 158 180 0.93
5 16 0.015 0.94 11.0 1.5 1 20 195 214 195 216 0.96
6 16 1.6 98 4.7 1.8 1 23 249 272 249 272 0.83
7 16 0.012 0.73 11.4 0.0 1 23 292 314 292 314 0.96
8 16 0.0013 0.084 14.3 2.7 1 23 318 340 318 340 0.98
9 16 0.2 13 7.5 0.6 1 23 346 368 346 368 0.89
10 16 0.024 1.5 10.3 1.1 1 23 374 398 374 398 0.97
11 16 0.029 1.8 10.1 0.2 1 22 404 425 404 427 0.90
12 16 0.0076 0.47 11.9 0.8 2 23 433 454 432 454 0.97
13 16 0.00014 0.0085 17.4 0.2 2 23 460 481 459 481 0.95
14 16 5.6e-06 0.00035 21.8 3.0 1 23 487 509 487 509 0.98
15 16 1.5e-07 9.3e-06 26.8 0.9 1 23 515 537 515 537 0.97
16 16 0.018 1.1 10.7 2.0 1 21 543 563 543 564 0.95

Sequence Information

Coding Sequence
ATGCACGGGAACGAAAAgtCCACGTTCATCGTCGGCACCGGCGATACGTTCTATTGCACGCTGTGCAACTTCAACACCCCCAAATTATCCGCATTGCGCGATCACTACGATTCGAGTTTGTCAACACGACACGTCAGGTGCTCGCCCTGCGACGCGCAATTCAATTGCGCATGCGATCTCAACAGGCACAGGAACACCTCCCACCCCCTCGGAGAAAACCCAATCGAGTGCAACCGCTGCCTCTACAAGTGCGCTTCGCTCAAAGAATTCACCCGCCACACTTTCCGGCGCCACGACGGCGGAAAAGTGCACAGGTGCAACGCATGCGCGTCGCGCGAACCCCCCACCCCTTCAGATTCACGCTCACACGGCGGCGGAGGCGTGCCGTTTCAGTGTCTCAACTGCAGCTTCGAGACTTTGCACACGGAACTCTTCAAGCACCACCTGTACAGTCACATCGTCAAGAAGCCGTTCACCTGCATCAAGTGCAGCTTCAGCTGCGGCACGTCGGAGGGCTTGAAGCTGCACATCGCGGCGCACAAGGGCGAGAAGCTCAGCGCCTTCTCGACCGCTCTGAAGACGTTCCGCTGTAACGTCTGCGATTTCGAGTGCAACGCGCTGAGAAACCTCCGCAAGCACATGTATCTGTCATTCAAGTGCGAAGTAAAATGGCTGTGCCCGACGGAGAAAGCGAAACCCAAAAGAATCCGCAAGAAGTGGAAGGAAGACACGGTGGTGAGGACGTACACGTGCGAAATATGCTCGATGACCGCGCGGCTAACCAAGACTGAATTAAACGCCCATTACAAAACCCACGGGAAGGCGCTGGGCTTGAAGAAGTACCGCCGGGGCCCCCCCAAACCCAACCAGATGTTCGCCTGCGAAATCTGCTCGGCGAAGTTCGCCTCCGAGGAAGACCTAGACGAGCACATCGCGAACCACGACGACCAACACAAATGCGACGTGTGCAAGAGGGGTTTCAAGAAGATCATCGATTACACCATGCATATGCAGACACACAACGACGATAAGCTGTACAAATGCCCCCTGTGCGACTTCAACACGTCCAACGCCTACCAAATCAAGCCGCACGTGTTCTCGCACAGCTTCGTCAAGAGATACGAGTGCCCCATCGAGGGGTGCAAGAAGGGCTTCATGTTGTCCACTCACTTCGAGGAGCATAAGAACTACCATACCGGCGAGAGGCCATTCGTTTGCGAAACGTGCGGGTCGGCTTTCATGTACAGTCGTTACTTAAGCGCGCACAGGGTGGCGACGCACAGCACCAAGCGGATCACGTGTGAAGTCTGCTCGGAAGTGTGCGTCGGCCAAAAGAATTTCCGCTCTCACTTACTCTCGCATAAGCGGCCCGAATGGGTGTGCGCGACTTGCGGAAAAACGTTCAGGAAACGCGTCGGATTGACGACTCACGAGTTGATGCACGCCGGGTACAAGCCGCACAAGTGTCGGTACTGCGACAAGGTTTTCGGCCAGAGAGGCTACCTGAACCAGCACGTGCGCACGCACACCGGCGATAAACCATACGATTGCGACTATTGCGGGAAAAAATTCACGCAGAGGTCCAGCTTGGTGAGGCACGTGCGCGGacacaccggcgaaaaaccTCACACCTGCCACTTCTGTAACAACGGGTATACGACGAAGGCCACCCTGGCTTCTCACTTGAAAAATTGCAAGGGTCCTTCCGAATAA
Protein Sequence
MHGNEKSTFIVGTGDTFYCTLCNFNTPKLSALRDHYDSSLSTRHVRCSPCDAQFNCACDLNRHRNTSHPLGENPIECNRCLYKCASLKEFTRHTFRRHDGGKVHRCNACASREPPTPSDSRSHGGGGVPFQCLNCSFETLHTELFKHHLYSHIVKKPFTCIKCSFSCGTSEGLKLHIAAHKGEKLSAFSTALKTFRCNVCDFECNALRNLRKHMYLSFKCEVKWLCPTEKAKPKRIRKKWKEDTVVRTYTCEICSMTARLTKTELNAHYKTHGKALGLKKYRRGPPKPNQMFACEICSAKFASEEDLDEHIANHDDQHKCDVCKRGFKKIIDYTMHMQTHNDDKLYKCPLCDFNTSNAYQIKPHVFSHSFVKRYECPIEGCKKGFMLSTHFEEHKNYHTGERPFVCETCGSAFMYSRYLSAHRVATHSTKRITCEVCSEVCVGQKNFRSHLLSHKRPEWVCATCGKTFRKRVGLTTHELMHAGYKPHKCRYCDKVFGQRGYLNQHVRTHTGDKPYDCDYCGKKFTQRSSLVRHVRGHTGEKPHTCHFCNNGYTTKATLASHLKNCKGPSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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