Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:50532376-50536782[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.078 4.8 8.8 4.8 1 23 417 439 417 439 0.96

2 10 9.6e-05 0.006 17.9 5.5 1 23 444 466 444 466 0.98

3 10 8.6e-06 0.00054 21.2 1.1 3 23 474 494 472 494 0.97

4 10 0.0047 0.3 12.6 1.1 1 23 501 524 501 524 0.95

5 10 8.2e-06 0.00051 21.3 0.7 1 23 529 551 529 551 0.99

6 10 0.024 1.5 10.4 5.6 1 23 560 583 560 583 0.94

7 10 0.0031 0.19 13.2 5.8 1 23 588 610 588 610 0.97

8 10 1.3e-06 8.4e-05 23.8 0.5 1 23 616 638 616 638 0.98

9 10 4.3e-06 0.00027 22.1 0.6 1 23 644 667 644 667 0.98

10 10 2.6e-05 0.0016 19.7 1.3 1 23 673 695 673 695 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.078	4.8	8.8	4.8	1	23	417	439	417	439	0.96
2	10	9.6e-05	0.006	17.9	5.5	1	23	444	466	444	466	0.98
3	10	8.6e-06	0.00054	21.2	1.1	3	23	474	494	472	494	0.97
4	10	0.0047	0.3	12.6	1.1	1	23	501	524	501	524	0.95
5	10	8.2e-06	0.00051	21.3	0.7	1	23	529	551	529	551	0.99
6	10	0.024	1.5	10.4	5.6	1	23	560	583	560	583	0.94
7	10	0.0031	0.19	13.2	5.8	1	23	588	610	588	610	0.97
8	10	1.3e-06	8.4e-05	23.8	0.5	1	23	616	638	616	638	0.98
9	10	4.3e-06	0.00027	22.1	0.6	1	23	644	667	644	667	0.98
10	10	2.6e-05	0.0016	19.7	1.3	1	23	673	695	673	695	0.98

Sequence Information

Coding Sequence: ATGGGACGCGATAGAACCGCCAGGGAACGCATGAAAAAATACAGAATTAATCTGAAAGCGGACGCCGTTAAGTACGCGGAATGCAAACGCAGAGACGCAAGTCGAAAGAGAATGTCCAGGCgagaacaaaaggaaaagaaaatcatgCTTCCCGAAGAAATTCGCATGAAGAGATTAAAAGAGAGAAACCGCAAGAGGGAGTACAGGCTGAGGAAGAAGAAAACCGAATCAGAACGCAGAGAACAAatcgaaaaaatcgaaaaaaccgAGGTgTTCGTCGTGAACGATTTCGCGAAGAGACTGCGCGAGAAGTACTCCAAGGTTttcgccgtcgccgccgccgccccatCTAGTGACGAATCGGCCGACGACGTCAAGAAAGCAGgagcggcggcgacggcggcggcggcgcgttTCATCTCGAATCCACCGGGGCACCAAATGTTCCGCCTCGAAGATTTCGAAGTCAAGCAGGCGCCAATCGGTCGGACGGAAAATAAAGCGTTGGAGAGGAGCGCAAGCGCGAACGAGTTACGAGCTATCGCCGCCGAGGTCGCTCAGAACCAACTCGCTATGATGAGAGTATCAGAGAGCGCAAGCGCGGACAAGTTACGAGCTACCGCCGTTGCGGCCGCTCAGAACCAACTCGCTATGATGAGAGTATCAGAGAACGCAAGCGCGGACACGCTACAAGCTATCGCCTCTTCCGCCCAGAACCAACTCACCACAACGGATGTGTCAGAGAGCGCAAGCGCGAACAAGTTACTACGAGCTACCGCCACCGCGGCAGCTTTGAACCAACTCGCTATGATGAGAGTATCAGAGAACGCAAGCGCGGACACGCTACGAGGTATCGCCTCCTCCGCTCAGGACCAACTCGCTATGATGGCAGTATCAGAGAGCGCAAGCGCGGACAAGTTACAACCTGTCGCCTCTCAGAATCAACAGATTATGAAAGCATCAGGTGACATAGCTCAGAATCAGCAACAGGACTTAAAAATGTCAGAAATTGCAAGCGAGAACATGTCACAAGTTGTTGGCGCCGCTCAGAATAATCAACAGGTCATAGGGAGGATAATCTTAAATCCGGATATCGTCAAGCGTCAAGGTCACCCCCAAAACATTCCCGTAATGCTCTTCATGCCCGCCCCCGCCACCGGCGGTTTAACCTCGACGCTACCGCCGACGCCGTTCCTGAACTACTTCAAATCCATCTCCGAGCTCCCGTCCTTCCCCCCCGAAAAAGTGTACACGTGCCAGGTTTGCCACGCGAGCTTCGACAACTACCCCCAGTTCCACCGCCACGGCTACAAGCACAAGGACAACACGCACAAGTGCGACGAGTGCGGCAAAACCTACACGTTCCTGCACCAGCTGAACAATCACAGGATGTCGCACACCGACGATAAGAAGTACGGCTGCGACAAGTGCGACAAGGTGTTCAAGACGCCGAAAACCTTGAAGAACCACGAGCGCTACCACACGGACAACTGGGCGAACTTCGAGTGCGACACGTGCAGCCGAAAGTTCCCGACGGTCTTCGCGCTCAGGCACCACGTCGACTCGGAACACCTGAACGTAACCTACAAATGTGACGTCTGCGATAAAGCGTACCGCACGATCGAATCGCTGAAGGTCCACAAGCGATCGCACGACCCTCAATTAGCGCTCGCCTCCTTCAAATGCGACCAGTGCGACGCCAAATTCAAGCACAAGTGCAGCTTGAAGGGGCACAAGCTTCAAGTGCACATGGGCAAGCTGCACATGTGTCACGTCTGCGGCAAAAAAATCGCCTCCCTGGCCTGCTTCAAGAGTCACATGAGGACGCACGCCGGCGATAAGCCGTTCGTCTGCGAGTTCTGCGGCAAGGCGTTCGTCTCGTCGGTCTTCCTCAAGACGCACATCCGAACGCACACCAAAGAGAAACCCTACCCGTGCAAGGTGTGCGGCAAGAAATTCTCGCAGGAGACCTCCGTGAGGACGCACGTGCGGACCGTGCACGAAGACGACCGACAATTCGAGTGCAACGTCTGCAACAAGAAGTACGCGTCGAAAATTCAGTTGAAGACTCACGTGAAATCGCACGGGATTCCCCTGTCGGAATTAATCACTGAGAAAGAAGGCGGGACAAGTTAA
Protein Sequence: MGRDRTARERMKKYRINLKADAVKYAECKRRDASRKRMSRREQKEKKIMLPEEIRMKRLKERNRKREYRLRKKKTESERREQIEKIEKTEVFVVNDFAKRLREKYSKVFAVAAAAPSSDESADDVKKAGAAATAAAARFISNPPGHQMFRLEDFEVKQAPIGRTENKALERSASANELRAIAAEVAQNQLAMMRVSESASADKLRATAVAAAQNQLAMMRVSENASADTLQAIASSAQNQLTTTDVSESASANKLLRATATAAALNQLAMMRVSENASADTLRGIASSAQDQLAMMAVSESASADKLQPVASQNQQIMKASGDIAQNQQQDLKMSEIASENMSQVVGAAQNNQQVIGRIILNPDIVKRQGHPQNIPVMLFMPAPATGGLTSTLPPTPFLNYFKSISELPSFPPEKVYTCQVCHASFDNYPQFHRHGYKHKDNTHKCDECGKTYTFLHQLNNHRMSHTDDKKYGCDKCDKVFKTPKTLKNHERYHTDNWANFECDTCSRKFPTVFALRHHVDSEHLNVTYKCDVCDKAYRTIESLKVHKRSHDPQLALASFKCDQCDAKFKHKCSLKGHKLQVHMGKLHMCHVCGKKIASLACFKSHMRTHAGDKPFVCEFCGKAFVSSVFLKTHIRTHTKEKPYPCKVCGKKFSQETSVRTHVRTVHEDDRQFECNVCNKKYASKIQLKTHVKSHGIPLSELITEKEGGTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -